Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00051
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.8  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 584 DNFGH*HFLLVQLLAILFTLISQKGGAGNVSYSY 483
           D F   H LL+ L  +L  +  Q+G  G +++ +
Sbjct: 50  DQFFRDHKLLLVLFRVLGVMPIQRGEIGRITFGW 83


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 584 DNFGH*HFLLVQLLAILFTLISQKGGAGNVSYSY 483
           D F   H LL+ L  +L  +  Q+G  G +++ +
Sbjct: 50  DQFFRDHKLLLVLFRVLGVMPIQRGEIGRITFGW 83


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 584 DNFGH*HFLLVQLLAILFTLISQKGGAGNVSYSY 483
           D F   H LL+ L  +L  +  Q+G  G +++ +
Sbjct: 50  DQFFRDHKLLLVLFRVLGVMPIQRGEIGRITFGW 83


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +1

Query: 412 ILGLTSVYLLSLTNFY*IYGIS 477
           I+ +   Y+L+LT+ + +YG+S
Sbjct: 247 IIIVVITYVLNLTDLFLVYGMS 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,578
Number of Sequences: 336
Number of extensions: 3686
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)