Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00051
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein. 32 1.8
BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261... 32 1.8
BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3... 32 1.8
BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein. 32 1.8
AB067212-1|BAC02250.1| 125|Homo sapiens immunoglobulin heavy ch... 32 1.8
AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein. 32 1.8
BC130445-1|AAI30446.1| 843|Homo sapiens F-box protein 11 protein. 31 4.2
BC043258-1|AAH43258.2| 915|Homo sapiens FBXO11 protein protein. 31 4.2
BC012728-1|AAH12728.2| 309|Homo sapiens FBXO11 protein protein. 31 4.2
AY827075-1|AAV87312.1| 927|Homo sapiens F-box protein 11 protein. 31 4.2
AK223592-1|BAD97312.1| 843|Homo sapiens F-box only protein 11 i... 31 4.2
AK025477-1|BAB15143.1| 266|Homo sapiens protein ( Homo sapiens ... 31 4.2
AF264714-1|AAF76888.1| 141|Homo sapiens vitiligo-associated pro... 31 4.2
AB067218-1|BAC02256.1| 126|Homo sapiens immunoglobulin heavy ch... 31 4.2
AY393052-1|AAS85989.1| 171|Homo sapiens immunoglobulin heavy ch... 30 7.4
>X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein.
Length = 1358
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 134 VNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCLTKLNALKLDNKTCLYAR 307
V T C H C T ++ G T Y +G Q + S SCLT + KTC + +
Sbjct: 305 VGTKMTCAH----CRTPLQKGQTAYQRKGLP-QLFCSSSCLTTFSKKPSGKKTCTFCK 357
>BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261
protein.
Length = 495
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 134 VNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCLTKLNALKLDNKTCLYAR 307
V T C H C T ++ G T Y +G Q + S SCLT + KTC + +
Sbjct: 305 VGTKMTCAH----CRTPLQKGQTAYQRKGLP-QLFCSSSCLTTFSKKPSGKKTCTFCK 357
>BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3
protein.
Length = 1370
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 134 VNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCLTKLNALKLDNKTCLYAR 307
V T C H C T ++ G T Y +G Q + S SCLT + KTC + +
Sbjct: 305 VGTKMTCAH----CRTPLQKGQTAYQRKGLP-QLFCSSSCLTTFSKKPSGKKTCTFCK 357
>BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein.
Length = 495
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 134 VNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCLTKLNALKLDNKTCLYAR 307
V T C H C T ++ G T Y +G Q + S SCLT + KTC + +
Sbjct: 305 VGTKMTCAH----CRTPLQKGQTAYQRKGLP-QLFCSSSCLTTFSKKPSGKKTCTFCK 357
>AB067212-1|BAC02250.1| 125|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 125
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Frame = +2
Query: 74 EVLSLECYVCENQEDNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKS- 250
+ L+L C +G CVN I+ L I W Y+S K + ISK
Sbjct: 16 QTLTLTCTFSGFSLSTSGMCVNWIRQPPGKALEWLARIDWDDDKYYSTSLKTRLTISKDT 75
Query: 251 -----CLTKLNALKLDNKTCLYARTFGIKTGSAQI 340
LT N +D T ART+ + Q+
Sbjct: 76 SKNQVVLTMTNMDPVDTATYYCARTYYYDSSGYQV 110
>AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein.
Length = 1380
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 134 VNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCLTKLNALKLDNKTCLYAR 307
V T C H C T ++ G T Y +G Q + S SCLT + KTC + +
Sbjct: 315 VGTKMTCAH----CRTPLQKGQTAYQRKGLP-QLFCSSSCLTTFSKKPSGKKTCTFCK 367
>BC130445-1|AAI30446.1| 843|Homo sapiens F-box protein 11 protein.
Length = 843
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 92 CYVCENQEDNNGKCVNTIKPCEHNQDV 172
C+ C N D N CVN IK C DV
Sbjct: 769 CHTC-NTTDRNAICVNCIKKCHQGHDV 794
>BC043258-1|AAH43258.2| 915|Homo sapiens FBXO11 protein protein.
Length = 915
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 92 CYVCENQEDNNGKCVNTIKPCEHNQDV 172
C+ C N D N CVN IK C DV
Sbjct: 841 CHTC-NTTDRNAICVNCIKKCHQGHDV 866
>BC012728-1|AAH12728.2| 309|Homo sapiens FBXO11 protein protein.
Length = 309
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 92 CYVCENQEDNNGKCVNTIKPCEHNQDV 172
C+ C N D N CVN IK C DV
Sbjct: 235 CHTC-NTTDRNAICVNCIKKCHQGHDV 260
>AY827075-1|AAV87312.1| 927|Homo sapiens F-box protein 11 protein.
Length = 927
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 92 CYVCENQEDNNGKCVNTIKPCEHNQDV 172
C+ C N D N CVN IK C DV
Sbjct: 853 CHTC-NTTDRNAICVNCIKKCHQGHDV 878
>AK223592-1|BAD97312.1| 843|Homo sapiens F-box only protein 11
isoform 1 variant protein.
Length = 843
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 92 CYVCENQEDNNGKCVNTIKPCEHNQDV 172
C+ C N D N CVN IK C DV
Sbjct: 769 CHTC-NTTDRNAICVNCIKKCHQGHDV 794
>AK025477-1|BAB15143.1| 266|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21824 fis, clone HEP01329. ).
Length = 266
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 92 CYVCENQEDNNGKCVNTIKPCEHNQDV 172
C+ C N D N CVN IK C DV
Sbjct: 192 CHTC-NTTDRNAICVNCIKKCHQGHDV 217
>AF264714-1|AAF76888.1| 141|Homo sapiens vitiligo-associated
protein VIT-1 protein.
Length = 141
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 92 CYVCENQEDNNGKCVNTIKPCEHNQDV 172
C+ C N D N CVN IK C DV
Sbjct: 40 CHTC-NTTDRNAICVNCIKKCHQGHDV 65
>AB067218-1|BAC02256.1| 126|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 126
Score = 31.1 bits (67), Expect = 4.2
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +2
Query: 74 EVLSLECYVCENQEDNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKS- 250
+ L+L C N+G CV+ I+ L I W + Y+S K + ISK
Sbjct: 16 QTLTLTCTFSGFSLRNSGICVSWIRQPPGKALEWLARINWDNDKYYSTSLKTRLTISKDT 75
Query: 251 -----CLTKLNALKLDNKTCLYAR 307
LT NA LD T AR
Sbjct: 76 SKNQVTLTVTNADPLDTATYYCAR 99
>AY393052-1|AAS85989.1| 171|Homo sapiens immunoglobulin heavy chain
protein.
Length = 171
Score = 30.3 bits (65), Expect = 7.4
Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Frame = +2
Query: 74 EVLSLECYVCENQEDNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKS- 250
+ L+L C +G CV+ I+ L I W Y+S K + ISK
Sbjct: 4 QTLTLTCTFFGFSLSTSGMCVSWIRQPPGKALEWLARIDWDDDKYYSTSLKTRLTISKDT 63
Query: 251 -----CLTKLNALKLDNKTCLYARTFGIKTGSA 334
LT N +D T AR G GSA
Sbjct: 64 SKNQVVLTMTNMDPVDTATYYCARMNGSVKGSA 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,085,390
Number of Sequences: 237096
Number of extensions: 1944019
Number of successful extensions: 3240
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3240
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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