Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00050
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    27   0.39 
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    24   4.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.4  

>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 24  YHRYGNAPH*EDPARISVGCVYGLIYSSSPSSQGFDEDG 140
           + RY   P  +  A+  + CVYG ++   P++    +DG
Sbjct: 138 FTRYVTKPVCKADAKAFINCVYGTLFEQCPTNVWTQKDG 176


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 389 LYVTLARNFNFNDAVLTIVHFKHT**AVIQRIQFKVMKTV-VSFNHGHVHWV 237
           LY+T AR   FN+    I++         Q++Q ++++ +   F+  HV ++
Sbjct: 42  LYITRAREVEFNNKKAIIIYVPVPKQKAFQKVQTRLVRELEKKFSGKHVVFI 93


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 634  PTAKPQLLTNEYLLPNNDFKMAEFRIL 554
            P ++ Q L    LLP    K+AEF ++
Sbjct: 1668 PDSRVQALKEFRLLPTGSIKIAEFLVM 1694


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,685
Number of Sequences: 2352
Number of extensions: 13000
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)