Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00050
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070551-1|AAL48022.1|  340|Drosophila melanogaster LD28119p pro...    30   3.2  
AE014297-1313|AAF54653.1|  340|Drosophila melanogaster CG10898-P...    30   3.2  
AE014298-1839|AAG22350.2| 1105|Drosophila melanogaster CG18646-P...    28   9.7  

>AY070551-1|AAL48022.1|  340|Drosophila melanogaster LD28119p
           protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 195 HYTLALYLNDIAHLELPSHRPRRILATKGSTSK 97
           H TL  ++ +I   ELP HRP  +L+ + S S+
Sbjct: 250 HSTLRKFMIEIFGAELPQHRPHGLLSVEHSASE 282


>AE014297-1313|AAF54653.1|  340|Drosophila melanogaster CG10898-PA
           protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 195 HYTLALYLNDIAHLELPSHRPRRILATKGSTSK 97
           H TL  ++ +I   ELP HRP  +L+ + S S+
Sbjct: 250 HSTLRKFMIEIFGAELPQHRPHGLLSVEHSASE 282


>AE014298-1839|AAG22350.2| 1105|Drosophila melanogaster CG18646-PA
           protein.
          Length = 1105

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 512 NNKNNYPNMANTRITAQSPHHEQDQDGFLKP 420
           NN NNY      ++  Q  H  Q Q   L+P
Sbjct: 499 NNNNNYSEQQQQQLPQQQQHDSQQQQQLLQP 529


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,238,216
Number of Sequences: 53049
Number of extensions: 574216
Number of successful extensions: 1095
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)