Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00048
(381 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 158 5e-39
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 158 5e-39
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 158 5e-39
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 158 5e-39
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 158 5e-39
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 158 5e-39
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 158 5e-39
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 157 1e-38
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 156 2e-38
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 148 7e-36
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 147 9e-36
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 56 5e-08
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.001
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 33 0.31
BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific gu... 30 2.2
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein. 30 2.2
AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide ... 30 2.2
AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein. 30 2.2
U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein. 30 2.9
U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein. 30 2.9
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein. 30 2.9
EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channe... 30 2.9
BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cat... 30 2.9
U00788-1|AAB60320.1| 526|Homo sapiens neutrophil oxidase factor... 29 6.6
DQ314879-1|ABC40738.1| 526|Homo sapiens neutrophil cytosolic fa... 29 6.6
BT007439-1|AAP36107.1| 526|Homo sapiens neutrophil cytosolic fa... 29 6.6
BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage ... 29 6.6
BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein. 29 6.6
BC001606-1|AAH01606.1| 526|Homo sapiens neutrophil cytosolic fa... 29 6.6
AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ re... 29 6.6
AL137800-6|CAC19686.1| 526|Homo sapiens neutrophil cytosolic fa... 29 6.6
AL137800-5|CAI19480.1| 143|Homo sapiens neutrophil cytosolic fa... 29 6.6
AF527950-1|AAM89263.1| 526|Homo sapiens p67phox-like protein pr... 29 6.6
AB209647-1|BAD92884.1| 598|Homo sapiens Neutrophil cytosol fact... 29 6.6
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 28 8.7
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 28 8.7
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 28 8.7
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 28 8.7
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 28 8.7
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 28 8.7
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 158 bits (384), Expect = 5e-39
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 158 bits (384), Expect = 5e-39
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 158 bits (384), Expect = 5e-39
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 158 bits (384), Expect = 5e-39
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 158 bits (384), Expect = 5e-39
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 158 bits (384), Expect = 5e-39
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 158 bits (384), Expect = 5e-39
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 157 bits (380), Expect = 1e-38
Identities = 70/91 (76%), Positives = 79/91 (86%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSC IHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCVIHSKVVRNRSREARK 93
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 156 bits (379), Expect = 2e-38
Identities = 70/91 (76%), Positives = 79/91 (86%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 148 bits (358), Expect = 7e-36
Identities = 66/88 (75%), Positives = 74/88 (84%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+ +
Sbjct: 3 KKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRK 265
LPKLY KLHYCVSCAIHSKVVRN R+
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSRE 90
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 147 bits (357), Expect = 9e-36
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+ +
Sbjct: 3 KKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
LPKL KLHYCVSC IHSKVVRN R+ +
Sbjct: 63 VLPKLCVKLHYCVSCVIHSKVVRNRSREARK 93
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 55.6 bits (128), Expect = 5e-08
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 179 FQLPKLYAKLHYCVSCAIHSKVVRNNRRKTEE 274
+ LPKLY KLHYCVSCAIHSKVVRN R+ +
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 32
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +2
Query: 107 KFVIRNIVEAAAVRDINDASVY 172
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 33.1 bits (72), Expect = 0.31
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVK 52
+KRRN GRAK GRGHV+
Sbjct: 3 KKRRNNGRAKKGRGHVQ 19
>BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific
guanine nucleotide-releasing factor 2 protein.
Length = 1237
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 68 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 247
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 248 RNN 256
R +
Sbjct: 409 RKS 411
>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
Length = 1181
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 92 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNN 256
DK +K + + E R + YPMFQ+P+ LH ++ H V RN+
Sbjct: 357 DKLLKHYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNS 408
>AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide
exchange factor 2 protein.
Length = 1237
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 68 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 247
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 248 RNN 256
R +
Sbjct: 409 RKS 411
>AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein.
Length = 1237
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 68 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 247
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 248 RNN 256
R +
Sbjct: 409 RKS 411
>U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 139 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 26
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein.
Length = 574
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 139 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 26
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
Length = 1275
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 92 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNN 256
DK +K + + E R + YPMFQ+P+ LH ++ H V RN+
Sbjct: 357 DKLLKHYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHDVLAHTPHEHVERNS 408
>EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channel
1a protein protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 139 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 26
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cation
channel 2, neuronal protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 139 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 26
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>U00788-1|AAB60320.1| 526|Homo sapiens neutrophil oxidase factor
protein.
Length = 526
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 229 HPQQSCQEQSKKDRRIRTPPKSNFPRDMSRPQ 324
HPQQ QE+S I PP S P RPQ
Sbjct: 302 HPQQQPQEESSPQSDIPAPPSSKAP---GRPQ 330
>DQ314879-1|ABC40738.1| 526|Homo sapiens neutrophil cytosolic
factor 2 (65kDa, chronic granulomatous disease,
autosomal protein.
Length = 526
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 229 HPQQSCQEQSKKDRRIRTPPKSNFPRDMSRPQ 324
HPQQ QE+S I PP S P RPQ
Sbjct: 302 HPQQQPQEESSPQSDIPAPPSSKAP---GRPQ 330
>BT007439-1|AAP36107.1| 526|Homo sapiens neutrophil cytosolic
factor 2 (65kDa, chronic granulomatous disease,
autosomal protein.
Length = 526
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 229 HPQQSCQEQSKKDRRIRTPPKSNFPRDMSRPQ 324
HPQQ QE+S I PP S P RPQ
Sbjct: 302 HPQQQPQEESSPQSDIPAPPSSKAP---GRPQ 330
>BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage
differentiation-associated 2 protein.
Length = 246
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -3
Query: 124 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 2
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein.
Length = 270
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -3
Query: 124 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 2
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>BC001606-1|AAH01606.1| 526|Homo sapiens neutrophil cytosolic
factor 2 (65kDa, chronic granulomatous disease,
autosomal protein.
Length = 526
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 229 HPQQSCQEQSKKDRRIRTPPKSNFPRDMSRPQ 324
HPQQ QE+S I PP S P RPQ
Sbjct: 302 HPQQQPQEESSPQSDIPAPPSSKAP---GRPQ 330
>AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ
receptor family member X protein.
Length = 246
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -3
Query: 124 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 2
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>AL137800-6|CAC19686.1| 526|Homo sapiens neutrophil cytosolic
factor 2 (65kDa, chronic granulomatous disease,
autosomal protein.
Length = 526
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 229 HPQQSCQEQSKKDRRIRTPPKSNFPRDMSRPQ 324
HPQQ QE+S I PP S P RPQ
Sbjct: 302 HPQQQPQEESSPQSDIPAPPSSKAP---GRPQ 330
>AL137800-5|CAI19480.1| 143|Homo sapiens neutrophil cytosolic
factor 2 (65kDa, chronic granulomatous disease,
autosomal protein.
Length = 143
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 229 HPQQSCQEQSKKDRRIRTPPKSNFPRDMSRPQ 324
HPQQ QE+S I PP S P RPQ
Sbjct: 41 HPQQQPQEESSPQSDIPAPPSSKAP---GRPQ 69
>AF527950-1|AAM89263.1| 526|Homo sapiens p67phox-like protein
protein.
Length = 526
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 229 HPQQSCQEQSKKDRRIRTPPKSNFPRDMSRPQ 324
HPQQ QE+S I PP S P RPQ
Sbjct: 302 HPQQQPQEESSPQSDIPAPPSSKAP---GRPQ 330
>AB209647-1|BAD92884.1| 598|Homo sapiens Neutrophil cytosol factor
2 variant protein.
Length = 598
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 229 HPQQSCQEQSKKDRRIRTPPKSNFPRDMSRPQ 324
HPQQ QE+S I PP S P RPQ
Sbjct: 374 HPQQQPQEESSPQSDIPAPPSSKAP---GRPQ 402
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 224 CAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVH 322
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 224 CAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVH 322
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 224 CAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVH 322
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 224 CAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVH 322
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 224 CAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVH 322
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 224 CAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVH 322
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,716,753
Number of Sequences: 237096
Number of extensions: 949434
Number of successful extensions: 2460
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2459
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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