Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00048
(381 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal prot... 161 2e-40
X13625-1|CAB38441.1| 114|Drosophila melanogaster protein ( Dros... 161 2e-40
AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p pro... 161 2e-40
AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-P... 161 2e-40
AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-P... 161 2e-40
AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-P... 161 2e-40
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 29 1.5
U80223-1|AAC47516.1| 1589|Drosophila melanogaster eukaryotic ini... 29 2.7
BT010047-1|AAQ22516.1| 1312|Drosophila melanogaster LD22885p pro... 29 2.7
AF056302-1|AAC13490.1| 1589|Drosophila melanogaster eIF-2alpha k... 29 2.7
AE014297-4744|AAF57150.1| 1589|Drosophila melanogaster CG1609-PA... 29 2.7
AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 28 4.7
AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 28 4.7
>X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal protein
S31 protein.
Length = 114
Score = 161 bits (392), Expect = 2e-40
Identities = 73/88 (82%), Positives = 79/88 (89%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++ +
Sbjct: 3 KKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRK 265
LPKLYAKLHYCVSCAIHSKVVRN R+
Sbjct: 63 VLPKLYAKLHYCVSCAIHSKVVRNRSRE 90
Score = 34.3 bits (75), Expect = 0.054
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 247 QEQSKKDRRIRTPPKSNFPRDMSR 318
+ +S++ RRIRTPP +FP+DM+R
Sbjct: 85 RNRSREARRIRTPPLRSFPKDMAR 108
>X13625-1|CAB38441.1| 114|Drosophila melanogaster protein (
Drosophila melanogastermRNA for putative ribosomal
protein S31. ).
Length = 114
Score = 161 bits (392), Expect = 2e-40
Identities = 73/88 (82%), Positives = 79/88 (89%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++ +
Sbjct: 3 KKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRK 265
LPKLYAKLHYCVSCAIHSKVVRN R+
Sbjct: 63 VLPKLYAKLHYCVSCAIHSKVVRNRSRE 90
Score = 34.3 bits (75), Expect = 0.054
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 247 QEQSKKDRRIRTPPKSNFPRDMSR 318
+ +S++ RRIRTPP +FP+DM+R
Sbjct: 85 RNRSREARRIRTPPLRSFPKDMAR 108
>AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p
protein.
Length = 114
Score = 161 bits (392), Expect = 2e-40
Identities = 73/88 (82%), Positives = 79/88 (89%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++ +
Sbjct: 3 KKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRK 265
LPKLYAKLHYCVSCAIHSKVVRN R+
Sbjct: 63 VLPKLYAKLHYCVSCAIHSKVVRNRSRE 90
Score = 34.3 bits (75), Expect = 0.054
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 247 QEQSKKDRRIRTPPKSNFPRDMSR 318
+ +S++ RRIRTPP +FP+DM+R
Sbjct: 85 RNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-PC,
isoform C protein.
Length = 114
Score = 161 bits (392), Expect = 2e-40
Identities = 73/88 (82%), Positives = 79/88 (89%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++ +
Sbjct: 3 KKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRK 265
LPKLYAKLHYCVSCAIHSKVVRN R+
Sbjct: 63 VLPKLYAKLHYCVSCAIHSKVVRNRSRE 90
Score = 34.3 bits (75), Expect = 0.054
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 247 QEQSKKDRRIRTPPKSNFPRDMSR 318
+ +S++ RRIRTPP +FP+DM+R
Sbjct: 85 RNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-PB,
isoform B protein.
Length = 114
Score = 161 bits (392), Expect = 2e-40
Identities = 73/88 (82%), Positives = 79/88 (89%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++ +
Sbjct: 3 KKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRK 265
LPKLYAKLHYCVSCAIHSKVVRN R+
Sbjct: 63 VLPKLYAKLHYCVSCAIHSKVVRNRSRE 90
Score = 34.3 bits (75), Expect = 0.054
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 247 QEQSKKDRRIRTPPKSNFPRDMSR 318
+ +S++ RRIRTPP +FP+DM+R
Sbjct: 85 RNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-PA,
isoform A protein.
Length = 114
Score = 161 bits (392), Expect = 2e-40
Identities = 73/88 (82%), Positives = 79/88 (89%)
Frame = +2
Query: 2 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 181
+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++ +
Sbjct: 3 KKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSY 62
Query: 182 QLPKLYAKLHYCVSCAIHSKVVRNNRRK 265
LPKLYAKLHYCVSCAIHSKVVRN R+
Sbjct: 63 VLPKLYAKLHYCVSCAIHSKVVRNRSRE 90
Score = 34.3 bits (75), Expect = 0.054
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 247 QEQSKKDRRIRTPPKSNFPRDMSR 318
+ +S++ RRIRTPP +FP+DM+R
Sbjct: 85 RNRSREARRIRTPPLRSFPKDMAR 108
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 220 VMRHPQQSCQEQSKKDRRIRTPPKSNFPRD 309
V R Q + Q+QSK D++ + PP + F RD
Sbjct: 2150 VAREQQLTRQQQSKLDKQEQLPPAATFSRD 2179
>U80223-1|AAC47516.1| 1589|Drosophila melanogaster eukaryotic
initiation factor eIF-2 alpha kinase protein.
Length = 1589
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 173 PMFQLPKLYAKLHYCVSCAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVHRQ 328
P+ Q+ +Y ++ +C C + + + N T+ L R + G H+H+Q
Sbjct: 689 PLMQV--MYIQMEFCEKCTLRTAIDDNLFNDTDRLWRLFREIAEGLAHIHQQ 738
>BT010047-1|AAQ22516.1| 1312|Drosophila melanogaster LD22885p
protein.
Length = 1312
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 173 PMFQLPKLYAKLHYCVSCAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVHRQ 328
P+ Q+ +Y ++ +C C + + + N T+ L R + G H+H+Q
Sbjct: 412 PLMQV--MYIQMEFCEKCTLRTAIDDNLFNDTDRLWRLFREIAEGLAHIHQQ 461
>AF056302-1|AAC13490.1| 1589|Drosophila melanogaster eIF-2alpha
kinase protein.
Length = 1589
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 173 PMFQLPKLYAKLHYCVSCAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVHRQ 328
P+ Q+ +Y ++ +C C + + + N T+ L R + G H+H+Q
Sbjct: 689 PLMQV--MYIQMEFCEKCTLRTAIDDNLFNDTDRLWRLFREIAEGLAHIHQQ 738
>AE014297-4744|AAF57150.1| 1589|Drosophila melanogaster CG1609-PA
protein.
Length = 1589
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 173 PMFQLPKLYAKLHYCVSCAIHSKVVRNNRRKTEESVLLPRVTSLGTCHVHRQ 328
P+ Q+ +Y ++ +C C + + + N T+ L R + G H+H+Q
Sbjct: 689 PLMQV--MYIQMEFCEKCTLRTAIDDNLFNDTDRLWRLFREIAEGLAHIHQQ 738
>AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p
protein.
Length = 664
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 23 RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 124
+A H G V V+CT C R + +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498
>AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA
protein.
Length = 664
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 23 RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 124
+A H G V V+CT C R + +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,817,097
Number of Sequences: 53049
Number of extensions: 309646
Number of successful extensions: 1074
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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