Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00046
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   0.68 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   2.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   2.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   2.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.4  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 48  IQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSN 155
           ++ E+E + T   + SN+  +Q+   K E    N+N
Sbjct: 430 VESEEEDEETSTTVFSNVEVVQEEAKKEESDSNNNN 465


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 9   DEMTTKLMTIENIIQREK-EGQSTIPDLLSNITNIQ 113
           +E  + L+ +  + ++ K EG+  +P+ L  I NIQ
Sbjct: 27  NEFKSTLLPLFGLKEQPKIEGKVQVPEALKKIYNIQ 62


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = +3

Query: 171 VTAKINLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLSTEQS 338
           +TAK   G +  +GIR+E D    +  D     L +  ++   H  +  ++  E +
Sbjct: 288 LTAKNKEGLIDDEGIREEVDTFMFEGHDTTAAALGFALMVLAGHKEVQDKIVEEMN 343


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = +3

Query: 171 VTAKINLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLSTEQS 338
           +TAK   G +  +GIR+E D    +  D     L +  ++   H  +  ++  E +
Sbjct: 288 LTAKNKEGLIDDEGIREEVDTFMFEGHDTTAAALGFALMVLAGHKEVQDKIVEEMN 343


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 410 CLYFSVDDLS 381
           C Y+S+DDLS
Sbjct: 115 CSYYSLDDLS 124


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 38  RKHYPKRKRRT 70
           RKH P RK RT
Sbjct: 110 RKHKPNRKPRT 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,237
Number of Sequences: 336
Number of extensions: 1901
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)