Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00046
(510 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.078
SB_12314| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 33 0.18
SB_17734| Best HMM Match : zf-C2H2 (HMM E-Value=0.0003) 33 0.18
SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 32 0.32
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_23840| Best HMM Match : Casein (HMM E-Value=2.8) 30 1.3
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15) 29 2.9
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 29 2.9
SB_53232| Best HMM Match : OAR (HMM E-Value=0.92) 28 3.9
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 28 3.9
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 28 3.9
SB_32239| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16) 28 3.9
SB_34107| Best HMM Match : DUF16 (HMM E-Value=0.42) 28 5.1
SB_8345| Best HMM Match : SNF7 (HMM E-Value=1.6) 28 5.1
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 27 6.8
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 27 6.8
SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 27 9.0
SB_50276| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_17366| Best HMM Match : Filament (HMM E-Value=0.14) 27 9.0
SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14) 27 9.0
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 36.7 bits (81), Expect = 0.011
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Frame = +2
Query: 20 DKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTK-NKKQQQASK*CDSQNKSRK 196
++VN RK K R +N + NK + +K + + NK+++Q +K + NK RK
Sbjct: 461 ERVNKERKRANKETER-VNKE--TERVNKERERVNKKKERLNKEKEQLNKEKEQLNKERK 517
Query: 197 RHFGWYKKRNR*IKIESYRLGNNATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDI 376
R K+R R + E RL +L + L+ TRE ++ K LN N +
Sbjct: 518 R---LNKERKR-VNKERERLNKEKERLNKET--ERLDKTRERLNKERKRLNKKKERLNKV 571
Query: 377 AKTDRQLKNTDRLIEMQYGNFNTTQNVND--KKLTQMQEQVDR 499
K R K +RL + T + +N K+L + ++++++
Sbjct: 572 RK--RLNKEKERLNKEMERLDKTRERLNKERKRLNKERKRLNK 612
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 33.9 bits (74), Expect = 0.078
Identities = 16/81 (19%), Positives = 40/81 (49%)
Frame = +3
Query: 9 DEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKIN 188
+E++ +++ ++ R K G+S LLS I ++ + + ++ + N++ +K+N
Sbjct: 71 EEISALKRSLKEMVARPKRGESEEASLLSEIATMKSELASCREIVREAQSTENELLSKMN 130
Query: 189 LGNVTLDGIRKETDKLKSKAI 251
L +E + L+S +
Sbjct: 131 TYRSMLADKEREIESLRSAVV 151
>SB_12314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/86 (20%), Positives = 42/86 (48%)
Frame = +2
Query: 242 ESYRLGNNATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIE 421
+ + + N + K + A N T EA+ A+ + + +++ + T+R L N E
Sbjct: 135 DDHPIANGSVKPMTVTSKPAENETAEAEKAAL--IEEVKQIKDRLYATERDLMNERNARE 192
Query: 422 MQYGNFNTTQNVNDKKLTQMQEQVDR 499
MQY + +D+K+ +++ + ++
Sbjct: 193 MQYAKDRNQFSNDDQKVKELESKYEQ 218
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 32.7 bits (71), Expect = 0.18
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = +2
Query: 20 DKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTK-NKKQQQASK*CDSQNKSRK 196
++VN RK K R +N + NK + +K + + NK+++Q +K + NK RK
Sbjct: 202 ERVNKERKRANKETER-VNKE--TERVNKERERVNKKKERLNKEKEQLNKEKEQLNKERK 258
Query: 197 RHFGWYKKRNR*IKIESYRLGNNATKLQEANLEGALNLTREAKHRAVKALN 349
R K+R R + E RL +L + L+ TRE ++ K LN
Sbjct: 259 R---LNKERKR-VNKERERLNKEKERLNKET--ERLDKTRERLNKERKRLN 303
>SB_17734| Best HMM Match : zf-C2H2 (HMM E-Value=0.0003)
Length = 369
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/86 (20%), Positives = 42/86 (48%)
Frame = +2
Query: 242 ESYRLGNNATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIE 421
+ + + N + K + A N T EA+ A+ + + +++ + T+R L N E
Sbjct: 135 DDHPIANGSVKPMTVTSKPAENETAEAEKAAL--IEEVKQIKDRLYATERDLMNERNARE 192
Query: 422 MQYGNFNTTQNVNDKKLTQMQEQVDR 499
MQY + +D+K+ +++ + ++
Sbjct: 193 MQYAKDRNQFSNDDQKVKELESKYEQ 218
>SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 31.9 bits (69), Expect = 0.32
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +2
Query: 41 KHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKK 220
K Y + R NH +T + + +N Q +A+ S KS F K
Sbjct: 213 KRYSNQTRANNNHASDRQTKRARRRTKRRRKKRNSNQTRANNNHASDRKSMNELFHALSK 272
Query: 221 RNR*IKIESYRLGNNATKLQEAN 289
+R I + Y+L N+ LQE +
Sbjct: 273 PHRCISSQLYQLLNHLNNLQEGS 295
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 31.9 bits (69), Expect = 0.32
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 18 TTKLMTIENIIQREKEGQSTIPDLLSN----ITNIQKLITKTEQKIKNSNRHLNDVTAKI 185
T K+ +E+ +Q S + + N + N+Q IT+ + K+ + R +
Sbjct: 651 TPKIKRLESELQDALNRASALEEDAKNHNQVVDNLQDEITRLKNKLSEAERQAAATQRES 710
Query: 186 NLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI 290
+ T+D ++KE D L ++ + + +N K L+
Sbjct: 711 VEKDTTIDSLKKEIDDLNNEIDELRSDLMNTKSLL 745
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 31.5 bits (68), Expect = 0.42
Identities = 20/108 (18%), Positives = 51/108 (47%)
Frame = +3
Query: 3 DFDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAK 182
DF + T+L T+E+++ K + + +T + KL+ ++ +++ ++ L + K
Sbjct: 939 DFQDTITQLKTLEDLLDTSKR---VVEEKEQKVTELDKLLNESVDELQQKDKSLKEKDGK 995
Query: 183 INLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLS 326
+ + L RKE +++ +++ K I ++ + L L+
Sbjct: 996 LAELDQALKESRKEIKNREAQVSQMDSSMREQKTEIYQKTMALEQNLN 1043
>SB_23840| Best HMM Match : Casein (HMM E-Value=2.8)
Length = 501
Score = 29.9 bits (64), Expect = 1.3
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = +2
Query: 236 KIESYRLGNNATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTD-R 412
++E Y L A LE L + A H AV A+N+A Q DIA T L+N +
Sbjct: 33 ELEKYGLQMPAFSKIGGILESELPVDEAALHAAVIAINEAIDHQ-DIAGTMEALQNPNAH 91
Query: 413 LIEMQYGNFNTT--------QNVNDKKLTQMQEQ 490
L+++ N +T +++ D+ LTQ + Q
Sbjct: 92 LVDLDRDNLMSTKLHCSKGEEDIYDRLLTQAEIQ 125
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +2
Query: 284 ANLEGALNLTREAKHRAVKALNDANHLQNDIA-KTDRQLKNTDRL------IEMQYGNFN 442
+ LE LN+ + K KAL++AN ++ K DR ++ D L + + N
Sbjct: 799 SKLESQLNVANQRKFELEKALDEANKELKPLSDKYDRASRDLDILQKTLDDTQSRLANAE 858
Query: 443 TTQNVNDKKLTQMQEQVD 496
T + K Q+QE +D
Sbjct: 859 MTLDAETSKKKQLQEDLD 876
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 95 QYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRN--R*IKIESYRLGNNA 268
QY+ H +T R K+QQ+ K + K +RH + +++N ++ S+RL
Sbjct: 298 QYHGHKQTLESERRWLKEQQEQDKAAQTLQKQWRRHRDYKRQQNEVEQEEVRSFRLRMPL 357
Query: 269 TKLQEANLEGALNLTREAKHR 331
+ A+ + L +RE +R
Sbjct: 358 FASKAAH-DSLLPASRETSYR 377
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 KLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLI-EMQYGNFNTT 448
K + ++E L L+ E K +KAL H + T +QLK+ LI ++
Sbjct: 68 KQAKMHMEETLRLSLEEKEDIIKALQTQEHSTALDSSTAQQLKDAKNLILRLEQEKQTAI 127
Query: 449 QNVNDKKLTQMQEQVD 496
Q++ +QE+ D
Sbjct: 128 QDMMSNMQVALQEKDD 143
>SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15)
Length = 1001
Score = 28.7 bits (61), Expect = 2.9
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 260 NNATKLQEANLEGALNLTREAKHRAVKALND--ANHLQNDIAKTDR--QLKNTDRLIEMQ 427
NN +L++ L ++ ++ K R +K + D A + Q + A+ QLK R+ E+
Sbjct: 748 NNDMRLKQ--LSNEVSDMKKTKARLMKQMKDEVAKNKQRESARNKEIAQLKKVSRMREIA 805
Query: 428 YGNFNTTQNVNDKKLTQMQEQVDRL 502
N + + D L + QE+V L
Sbjct: 806 IKNLESEKRQKDIILRRKQEEVKAL 830
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 101 NKHTKTYHKNRTKNKKQQQASK*CDSQNKSRK 196
++ TKT HK +TK K+ +QA++ SRK
Sbjct: 20 SRKTKTSHKTKTKPKRPRQAARPSCKTKPSRK 51
>SB_53232| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 806
Score = 28.3 bits (60), Expect = 3.9
Identities = 32/139 (23%), Positives = 50/139 (35%)
Frame = +2
Query: 92 IQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR*IKIESYRLGNNAT 271
I+ K Y KNR NKK Q + + R+ G + R K S +
Sbjct: 40 IKRAKDKDYYEKNR--NKKIAQV---IERRKARREETKGKSRTRTEIKKAASKKRRKEQR 94
Query: 272 KLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQ 451
LE + RE V+ N + + + + LKNT + + T
Sbjct: 95 ATAREELERKRQIAREKTRERVRRYRQKN--KEEQGQEKKNLKNTGERFKNRTSKKRVTD 152
Query: 452 NVNDKKLTQMQEQVDRLET 508
V DK +++ + LET
Sbjct: 153 KVKDKLPQTPEKKAEVLET 171
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 36 IENIIQREKEGQSTI-PDLLSNITNIQKLITKTEQKI-KNSNRHLNDVTA 179
+E ++ G+ I PDL SNI +++T Q+I +N H D +A
Sbjct: 169 LEKVVVEPAVGRQMIRPDLRSNIITTMSTVSRTGQRINRNPPEHSFDASA 218
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 11 RNDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKN-RTKNKKQQQASK*CDSQNK 187
+ DD D +K K K ++ N NK ++ +K ++KNK+++ +K +S+NK
Sbjct: 426 QTDDGKTDKKKSKKKSKDKSKNKG--EKSKNKEEESKNKEEKSKNKEEESKNKEEESKNK 483
Query: 188 SRKR 199
KR
Sbjct: 484 EEKR 487
>SB_32239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.3 bits (60), Expect = 3.9
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 98 YNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR*IKIESYRLGNNATKL 277
Y K+ + HK++ + + ++ K Q RK+ R+R K + GNNA K
Sbjct: 20 YAKYNEYKHKDKERKRSERDRPKEQSQQENDRKKK----ANRDRVRKFRLLQKGNNAAKA 75
Query: 278 Q---EANLEGALNLTREAKHRAV 337
+ ++N E A T +A RAV
Sbjct: 76 RTTPKSNNEKAYK-TPQALGRAV 97
>SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16)
Length = 558
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 386 DRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLE 505
+ L N + L++ + N N D K+ +Q++++R+E
Sbjct: 131 NENLINENLLLQAELDNLNNELKAKDNKIESLQDELERME 170
>SB_34107| Best HMM Match : DUF16 (HMM E-Value=0.42)
Length = 171
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 440 NTTQNVNDKKLTQMQEQVDRLE 505
N T D+K+T++Q +VDRL+
Sbjct: 58 NQTMKAKDEKITELQAEVDRLK 79
>SB_8345| Best HMM Match : SNF7 (HMM E-Value=1.6)
Length = 216
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 3 DFDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLI--TKTEQKIKNSNRHLNDVT 176
D ++ I + +QR + ST+P + N + +Q++ T T Q++ ++ L +T
Sbjct: 143 DITSTLQRMTDITSTLQRMTDNTSTLPRMTDNTSTLQRMTDNTSTLQRMNDNTSTLQRMT 202
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 239 IESYRLGNNATKLQEANLEGALNLTREAKHRAVKALNDANHLQND----IAKTDRQLKNT 406
+ES RLG + + + GAL+ R+ H+ K + + Q++ + D+ + T
Sbjct: 301 VESERLGPRPSVIAVGRISGALDKKRKKTHKVQKHTSSESSKQSEPVTFVINLDKSTRKT 360
Query: 407 DRLIE 421
R ++
Sbjct: 361 SRSLK 365
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 505 FKSIYLFLHLGKFFIIYILSSIKVAILHFYKSV-CIFQL 392
F +Y+ L F++ YIL+ I +A+ F V C+F +
Sbjct: 263 FTILYIILASAIFYVPYILTMISIALYGFILPVRCMFSI 301
>SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +2
Query: 20 DKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKR 199
DK + +K+Y K+K + + K K Y K + +KK+ K S+ K +
Sbjct: 204 DKPINPKKNYAKKKDKGSGSGSGNGKPLKPKKNYGKKKNYSKKKDYGKKKNYSKKKKNPK 263
Query: 200 HFGWYKKRNR 229
+ + KK+NR
Sbjct: 264 NNKYNKKKNR 273
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 33 TIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTL-- 206
TIE + + + +S + D+ +KL+ T+ ++ + + +++ I+ N+ L
Sbjct: 716 TIEELHEEVETLRSRLQDVGQAKLEAEKLVQDTQATVQQQSEEVRSLSSDIDRLNLQLAE 775
Query: 207 -DGIRKETDKLKSKAID*ETT 266
+R+E L+ + +D E T
Sbjct: 776 AGNLREENASLRQQLLDTEHT 796
>SB_50276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 272 KLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQ 451
K ++N+ +L +++ + ALND N L + + + NT +L M + +
Sbjct: 498 KFLKSNILVPQSLQKQSLSDSQSALNDLNLLGS--GQEGKSSVNTQQLHTMNIDDSELSP 555
Query: 452 NVNDKKLTQMQEQV 493
+ ND+ TQ Q+Q+
Sbjct: 556 DDNDECDTQKQQQI 569
>SB_17366| Best HMM Match : Filament (HMM E-Value=0.14)
Length = 306
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 347 NDANHLQNDIAKTDRQLKNTDR-LIEMQYGNFNTTQNVNDK 466
N A H+Q +I +TD +L+ R +E++ G ++ Q N++
Sbjct: 235 NVATHMQENIRRTDEELQGVKRERVELE-GRLSSLQRKNEE 274
>SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14)
Length = 388
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/40 (22%), Positives = 22/40 (55%)
Frame = +2
Query: 386 DRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLE 505
+ L N + L++ + N N D ++ +Q++++R+E
Sbjct: 141 NENLINENLLLQAELDNLNNELKAKDNRIESLQDELERME 180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,567,062
Number of Sequences: 59808
Number of extensions: 209043
Number of successful extensions: 746
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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