Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00046
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein. 32 1.3
U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein. 32 1.3
M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein. 32 1.3
J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein. 32 1.3
BC067349-1|AAH67349.1| 165|Homo sapiens TOP1 protein protein. 32 1.3
BC004475-1|AAH04475.1| 164|Homo sapiens TOP1 protein protein. 32 1.3
AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I p... 32 1.3
AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I p... 32 1.3
BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 1... 31 1.8
AY354204-1|AAQ63889.2| 972|Homo sapiens retinoic acid induced 1... 31 1.8
AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein. 31 1.8
AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment e... 31 1.8
AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein. 31 1.8
BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil do... 30 4.1
BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 30 4.1
AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protei... 30 4.1
AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 30 4.1
AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 30 4.1
AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein. 30 4.1
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 30 4.1
AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein. 30 4.1
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 30 4.1
U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein. 30 5.4
M99061-1|AAC83410.1| 645|Homo sapiens epidermal cytokeratin 2 p... 30 5.4
BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 5.4
BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 5.4
BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 5.4
BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding... 30 5.4
AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding... 30 5.4
AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding... 30 5.4
AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding... 30 5.4
AF019084-1|AAB81946.1| 645|Homo sapiens keratin 2e protein. 30 5.4
AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein pro... 30 5.4
AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein pro... 30 5.4
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 29 7.1
M91556-1|AAA59899.1| 1682|Homo sapiens Na+ channel protein. 29 7.1
BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase D... 29 7.1
BC111954-1|AAI11955.1| 1066|Homo sapiens WD repeat domain 67 pro... 29 7.1
BC101724-1|AAI01725.1| 1066|Homo sapiens WD repeat domain 67 pro... 29 7.1
BC027237-1|AAH27237.1| 340|Homo sapiens WDR67 protein protein. 29 7.1
AK056434-1|BAB71182.1| 1066|Homo sapiens protein ( Homo sapiens ... 29 7.1
AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein. 29 7.1
U60819-1|AAB39829.1| 685|Homo sapiens rBAT protein. 29 9.4
M95548-1|AAA35500.1| 685|Homo sapiens amino acid transport prot... 29 9.4
L11696-1|AAA81778.1| 685|Homo sapiens amino acid transport rela... 29 9.4
D82326-1|BAA11541.1| 685|Homo sapiens Na+-independent neutral a... 29 9.4
DQ023517-1|AAY89648.1| 551|Homo sapiens SLC3A1 variant G protein. 29 9.4
DQ023516-1|AAY89647.1| 564|Homo sapiens SLC3A1 variant F protein. 29 9.4
DQ023515-1|AAY89646.1| 502|Homo sapiens SLC3A1 variant E protein. 29 9.4
DQ023513-1|AAY89644.1| 391|Homo sapiens SLC3A1 variant C protein. 29 9.4
DQ023512-1|AAY89643.1| 407|Homo sapiens SLC3A1 variant B protein. 29 9.4
BC132827-1|AAI32828.1| 949|Homo sapiens CCDC66 protein protein. 29 9.4
BC093626-1|AAH93626.1| 685|Homo sapiens solute carrier family 3... 29 9.4
BC093624-1|AAH93624.1| 685|Homo sapiens solute carrier family 3... 29 9.4
BC047509-1|AAH47509.1| 831|Homo sapiens coiled-coil domain cont... 29 9.4
BC022386-1|AAH22386.1| 685|Homo sapiens solute carrier family 3... 29 9.4
BC009771-1|AAH09771.1| 314|Homo sapiens BRCA2 and CDKN1A intera... 29 9.4
AY064249-1|AAL55440.1| 314|Homo sapiens BRCA2 and Cip1/p21 inte... 29 9.4
AY064248-1|AAL55439.1| 322|Homo sapiens BRCA2 and Cip1/p21 inte... 29 9.4
AY064247-2|AAL55438.1| 314|Homo sapiens BRCA2 and Cip1/p21 inte... 29 9.4
AY064247-1|AAL55436.1| 322|Homo sapiens BRCA2 and Cip1/p21 inte... 29 9.4
AL360176-8|CAI12093.1| 322|Homo sapiens BRCA2 and CDKN1A intera... 29 9.4
AL360176-7|CAI12092.1| 292|Homo sapiens BRCA2 and CDKN1A intera... 29 9.4
AL360176-6|CAI12091.1| 314|Homo sapiens BRCA2 and CDKN1A intera... 29 9.4
AK223146-1|BAD96866.1| 685|Homo sapiens solute carrier family 3... 29 9.4
AC013717-2|AAX88955.1| 685|Homo sapiens unknown protein. 29 9.4
AB040451-1|BAA92928.1| 314|Homo sapiens TOK-1beta protein. 29 9.4
AB040450-1|BAA92927.1| 322|Homo sapiens TOK-1alpha protein. 29 9.4
AB033549-1|BAB16841.1| 685|Homo sapiens hrBAT protein. 29 9.4
>U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYN----KHTKTYHKNRTKNKKQQQASK*CD-SQ 181
D ++ND KH K K R H + + KH+ + HK+ K K+++ +K D S
Sbjct: 11 DFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS 70
Query: 182 NKSRKRHFGWYKKRNR*IKIES 247
K + +H K++ + K+ +
Sbjct: 71 EKHKDKHKDRDKEKRKEEKVRA 92
>U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYN----KHTKTYHKNRTKNKKQQQASK*CD-SQ 181
D ++ND KH K K R H + + KH+ + HK+ K K+++ +K D S
Sbjct: 11 DFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS 70
Query: 182 NKSRKRHFGWYKKRNR*IKIES 247
K + +H K++ + K+ +
Sbjct: 71 EKHKDKHKDRDKEKRKEEKVRA 92
>M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein.
Length = 765
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYN----KHTKTYHKNRTKNKKQQQASK*CD-SQ 181
D ++ND KH K K R H + + KH+ + HK+ K K+++ +K D S
Sbjct: 15 DFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS 74
Query: 182 NKSRKRHFGWYKKRNR*IKIES 247
K + +H K++ + K+ +
Sbjct: 75 EKHKDKHKDRDKEKRKEEKVRA 96
>J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein.
Length = 765
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYN----KHTKTYHKNRTKNKKQQQASK*CD-SQ 181
D ++ND KH K K R H + + KH+ + HK+ K K+++ +K D S
Sbjct: 15 DFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS 74
Query: 182 NKSRKRHFGWYKKRNR*IKIES 247
K + +H K++ + K+ +
Sbjct: 75 EKHKDKHKDRDKEKRKEEKVRA 96
>BC067349-1|AAH67349.1| 165|Homo sapiens TOP1 protein protein.
Length = 165
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYN----KHTKTYHKNRTKNKKQQQASK*CD-SQ 181
D ++ND KH K K R H + + KH+ + HK+ K K+++ +K D S
Sbjct: 15 DFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS 74
Query: 182 NKSRKRHFGWYKKRNR*IKIES 247
K + +H K++ + K+ +
Sbjct: 75 EKHKDKHKDRDKEKRKEEKVRA 96
>BC004475-1|AAH04475.1| 164|Homo sapiens TOP1 protein protein.
Length = 164
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYN----KHTKTYHKNRTKNKKQQQASK*CD-SQ 181
D ++ND KH K K R H + + KH+ + HK+ K K+++ +K D S
Sbjct: 15 DFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS 74
Query: 182 NKSRKRHFGWYKKRNR*IKIES 247
K + +H K++ + K+ +
Sbjct: 75 EKHKDKHKDRDKEKRKEEKVRA 96
>AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYN----KHTKTYHKNRTKNKKQQQASK*CD-SQ 181
D ++ND KH K K R H + + KH+ + HK+ K K+++ +K D S
Sbjct: 15 DFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS 74
Query: 182 NKSRKRHFGWYKKRNR*IKIES 247
K + +H K++ + K+ +
Sbjct: 75 EKHKDKHKDRDKEKRKEEKVRA 96
>AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYN----KHTKTYHKNRTKNKKQQQASK*CD-SQ 181
D ++ND KH K K R H + + KH+ + HK+ K K+++ +K D S
Sbjct: 15 DFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS 74
Query: 182 NKSRKRHFGWYKKRNR*IKIES 247
K + +H K++ + K+ +
Sbjct: 75 EKHKDKHKDRDKEKRKEEKVRA 96
>BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 14
protein.
Length = 980
Score = 31.5 bits (68), Expect = 1.8
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 6 FDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHL 164
+ ++ +L ++ ++ +KE +I + L IT ++ + E+KI N HL
Sbjct: 706 YSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHL 758
>AY354204-1|AAQ63889.2| 972|Homo sapiens retinoic acid induced 14
isoform protein.
Length = 972
Score = 31.5 bits (68), Expect = 1.8
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 6 FDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHL 164
+ ++ +L ++ ++ +KE +I + L IT ++ + E+KI N HL
Sbjct: 698 YSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHL 750
>AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein.
Length = 983
Score = 31.5 bits (68), Expect = 1.8
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 6 FDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHL 164
+ ++ +L ++ ++ +KE +I + L IT ++ + E+KI N HL
Sbjct: 709 YSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHL 761
>AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment
epithelial cell protein protein.
Length = 980
Score = 31.5 bits (68), Expect = 1.8
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 6 FDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHL 164
+ ++ +L ++ ++ +KE +I + L IT ++ + E+KI N HL
Sbjct: 706 YSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHL 758
>AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein.
Length = 989
Score = 31.5 bits (68), Expect = 1.8
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 6 FDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHL 164
+ ++ +L ++ ++ +KE +I + L IT ++ + E+KI N HL
Sbjct: 715 YSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHL 767
>BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil domain
containing 2 protein.
Length = 1583
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/88 (21%), Positives = 42/88 (47%)
Frame = +3
Query: 33 TIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDG 212
T++ + +K+ Q T + I + ++L+ + QK+ N N + D+ +I + +
Sbjct: 1040 TMQELELVKKDAQQTTL-MNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQET 1098
Query: 213 IRKETDKLKSKAID*ETTPLNYKKLI*K 296
+++E L+S E K+L+ K
Sbjct: 1099 LQEEITSLQSSVQQYEEKNTKIKQLLVK 1126
>BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 95 QYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR 229
++++H K HK+R+K+KK + +S+ + ++K K H +KK R
Sbjct: 39 KHSRHKKKKHKHRSKHKKHKHSSE--EDKDKKHK-HKHKHKKHKR 80
>AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protein
kinase protein.
Length = 1007
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 95 QYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR 229
++++H K HK+R+K+KK + +S+ + ++K K H +KK R
Sbjct: 39 KHSRHKKKKHKHRSKHKKHKHSSE--EDKDKKHK-HKHKHKKHKR 80
>AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 95 QYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR 229
++++H K HK+R+K+KK + +S+ + ++K K H +KK R
Sbjct: 39 KHSRHKKKKHKHRSKHKKHKHSSE--EDKDKKHK-HKHKHKKHKR 80
>AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 95 QYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR 229
++++H K HK+R+K+KK + +S+ + ++K K H +KK R
Sbjct: 39 KHSRHKKKKHKHRSKHKKHKHSSE--EDKDKKHK-HKHKHKKHKR 80
>AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein.
Length = 1007
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 95 QYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR 229
++++H K HK+R+K+KK + +S+ + ++K K H +KK R
Sbjct: 39 KHSRHKKKKHKHRSKHKKHKHSSE--EDKDKKHK-HKHKHKKHKR 80
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/88 (21%), Positives = 42/88 (47%)
Frame = +3
Query: 33 TIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDG 212
T++ + +K+ Q T + I + ++L+ + QK+ N N + D+ +I + +
Sbjct: 1040 TMQELELVKKDAQQTTL-MNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQET 1098
Query: 213 IRKETDKLKSKAID*ETTPLNYKKLI*K 296
+++E L+S E K+L+ K
Sbjct: 1099 LQEEITSLQSSVQQYEEKNTKIKQLLVK 1126
>AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein.
Length = 1028
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 95 QYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR 229
++++H K HK+R+K+KK + +S+ + ++K K H +KK R
Sbjct: 60 KHSRHKKKKHKHRSKHKKHKHSSE--EDKDKKHK-HKHKHKKHKR 101
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/88 (21%), Positives = 42/88 (47%)
Frame = +3
Query: 33 TIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDG 212
T++ + +K+ Q T + I + ++L+ + QK+ N N + D+ +I + +
Sbjct: 1092 TMQELELVKKDAQQTTL-MNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQET 1150
Query: 213 IRKETDKLKSKAID*ETTPLNYKKLI*K 296
+++E L+S E K+L+ K
Sbjct: 1151 LQEEITSLQSSVQQYEEKNTKIKQLLVK 1178
>U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein.
Length = 815
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 14 NDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSR 193
+D + +D + +RKR+T + I+ K T T ++ K KK ++ K N SR
Sbjct: 614 SDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDNASR 673
>M99061-1|AAC83410.1| 645|Homo sapiens epidermal cytokeratin 2
protein.
Length = 645
Score = 29.9 bits (64), Expect = 5.4
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +3
Query: 12 EMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQK----IKNSNRHLNDVTA 179
E+ ++ + +IQR Q I + N+Q I EQ+ +K++ LND+
Sbjct: 397 EIKIEISELNRVIQRL---QGEIAHVKKQCKNVQDAIADAEQRGEHALKDARNKLNDLEE 453
Query: 180 KINLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLST 329
+ L + ++ +L + + + Y+KL+ E + G LS+
Sbjct: 454 ALQQAKEDLARLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGDLSS 503
>BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 29.9 bits (64), Expect = 5.4
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +3
Query: 12 EMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQK----IKNSNRHLNDVTA 179
E+ ++ + +IQR Q I + N+Q I EQ+ +K++ LND+
Sbjct: 391 EIKIEISELNRVIQRL---QGEIAHVKKQCKNVQDAIADAEQRGEHALKDARNKLNDLEE 447
Query: 180 KINLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLST 329
+ L + ++ +L + + + Y+KL+ E + G LS+
Sbjct: 448 ALQQAKEDLARLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGDLSS 497
>BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 29.9 bits (64), Expect = 5.4
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +3
Query: 12 EMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQK----IKNSNRHLNDVTA 179
E+ ++ + +IQR Q I + N+Q I EQ+ +K++ LND+
Sbjct: 391 EIKIEISELNRVIQRL---QGEIAHVKKQCKNVQDAIADAEQRGEHALKDARNKLNDLEE 447
Query: 180 KINLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLST 329
+ L + ++ +L + + + Y+KL+ E + G LS+
Sbjct: 448 ALQQAKEDLARLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGDLSS 497
>BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 29.9 bits (64), Expect = 5.4
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +3
Query: 12 EMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQK----IKNSNRHLNDVTA 179
E+ ++ + +IQR Q I + N+Q I EQ+ +K++ LND+
Sbjct: 391 EIKIEISELNRVIQRL---QGEIAHVKKQCKNVQDAIADAEQRGEHALKDARNKLNDLEE 447
Query: 180 KINLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLST 329
+ L + ++ +L + + + Y+KL+ E + G LS+
Sbjct: 448 ALQQAKEDLARLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGDLSS 497
>BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 14 NDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSR 193
+D + +D + +RKR+T + I+ K T T ++ K KK ++ K N SR
Sbjct: 844 SDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDNASR 903
>AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 980
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 14 NDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSR 193
+D + +D + +RKR+T + I+ K T T ++ K KK ++ K N SR
Sbjct: 779 SDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDNASR 838
>AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 14 NDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSR 193
+D + +D + +RKR+T + I+ K T T ++ K KK ++ K N SR
Sbjct: 844 SDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDNASR 903
>AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding RS
protein protein.
Length = 1045
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 14 NDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSR 193
+D + +D + +RKR+T + I+ K T T ++ K KK ++ K N SR
Sbjct: 844 SDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDNASR 903
>AF019084-1|AAB81946.1| 645|Homo sapiens keratin 2e protein.
Length = 645
Score = 29.9 bits (64), Expect = 5.4
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +3
Query: 12 EMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQK----IKNSNRHLNDVTA 179
E+ ++ + +IQR Q I + N+Q I EQ+ +K++ LND+
Sbjct: 397 EIKIEISELNRVIQRL---QGEIAHVKKQCKNVQDAIADAEQRGEHALKDARNKLNDLEE 453
Query: 180 KINLGNVTLDGIRKETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLST 329
+ L + ++ +L + + + Y+KL+ E + G LS+
Sbjct: 454 ALQQAKEDLARLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGDLSS 503
>AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein
protein.
Length = 980
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 14 NDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSR 193
+D + +D + +RKR+T + I+ K T T ++ K KK ++ K N SR
Sbjct: 779 SDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDNASR 838
>AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein protein.
Length = 1045
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 14 NDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSR 193
+D + +D + +RKR+T + I+ K T T ++ K KK ++ K N SR
Sbjct: 844 SDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDNASR 903
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 29.5 bits (63), Expect = 7.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +3
Query: 96 NITNIQKLITKTEQKIKNSNRHLNDVTAKIN----LGNVTLDGIRKETDKLKSK 245
N+T I + ++N+ ++L + K N LG + L+G+ +ETD L+ K
Sbjct: 1579 NLTGIIPVPYGILSNLENTTKYLQESLLKENMQKDLGKIKLEGVAEETDNLQKK 1632
>M91556-1|AAA59899.1| 1682|Homo sapiens Na+ channel protein.
Length = 1682
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 114 KLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGIRKETDKLKSK 245
K++ KT+ K++ H+N+V K ++ + TL + D LK K
Sbjct: 765 KILCKTQNVPKDTMDHVNEVYVKEDISDHTLSELSNTQDFLKDK 808
>BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase DNA
binding protein 1 protein.
Length = 1709
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 89 IIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR*IK-IESYR-LGN 262
+ QY+ H K H+ + K + N R + YK+ +R E +R L +
Sbjct: 1550 LTQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDD 1609
Query: 263 NATKLQEANLEGALNLTREAKHRA 334
+ ++ +NLEG+L + HR+
Sbjct: 1610 HRSRDHRSNLEGSLKDRSHSDHRS 1633
>BC111954-1|AAI11955.1| 1066|Homo sapiens WD repeat domain 67
protein.
Length = 1066
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 275 LQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQN 454
LQ+A L L ++ + ++ L+D + + DR++ T R +EM+ + +
Sbjct: 772 LQDAARRRFLKLQQDQQEMELRRLDD--EIGRKVYMRDREIAATARDLEMRQLELESQKR 829
Query: 455 VNDKKLTQMQE 487
+ +K LT+ QE
Sbjct: 830 LYEKNLTENQE 840
>BC101724-1|AAI01725.1| 1066|Homo sapiens WD repeat domain 67
protein.
Length = 1066
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 275 LQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQN 454
LQ+A L L ++ + ++ L+D + + DR++ T R +EM+ + +
Sbjct: 772 LQDAARRRFLKLQQDQQEMELRRLDD--EIGRKVYMRDREIAATARDLEMRQLELESQKR 829
Query: 455 VNDKKLTQMQE 487
+ +K LT+ QE
Sbjct: 830 LYEKNLTENQE 840
>BC027237-1|AAH27237.1| 340|Homo sapiens WDR67 protein protein.
Length = 340
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 275 LQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQN 454
LQ+A L L ++ + ++ L+D + + DR++ T R +EM+ + +
Sbjct: 111 LQDAARRRFLKLQQDQQEMELRRLDD--EIGRKVYMRDREIAATARDLEMRQLELESQKR 168
Query: 455 VNDKKLTQMQE 487
+ +K LT+ QE
Sbjct: 169 LYEKNLTENQE 179
>AK056434-1|BAB71182.1| 1066|Homo sapiens protein ( Homo sapiens
cDNA FLJ31872 fis, clone NT2RP7002376, weakly similar to
M PROTEIN, SEROTYPE 2.1 PRECURSOR. ).
Length = 1066
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 275 LQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQN 454
LQ+A L L ++ + ++ L+D + + DR++ T R +EM+ + +
Sbjct: 772 LQDAARRRFLKLQQDQQEMELRRLDD--EIGRKVYMRDREIAATARDLEMRQLELESQKR 829
Query: 455 VNDKKLTQMQE 487
+ +K LT+ QE
Sbjct: 830 LYEKNLTENQE 840
>AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein.
Length = 1709
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 89 IIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRHFGWYKKRNR*IK-IESYR-LGN 262
+ QY+ H K H+ + K + N R + YK+ +R E +R L +
Sbjct: 1550 LTQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDD 1609
Query: 263 NATKLQEANLEGALNLTREAKHRA 334
+ ++ +NLEG+L + HR+
Sbjct: 1610 HRSRDHRSNLEGSLKDRSHSDHRS 1633
>U60819-1|AAB39829.1| 685|Homo sapiens rBAT protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>M95548-1|AAA35500.1| 685|Homo sapiens amino acid transport protein
protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>L11696-1|AAA81778.1| 685|Homo sapiens amino acid transport related
protein protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>D82326-1|BAA11541.1| 685|Homo sapiens Na+-independent neutral and
basic amino acid transporter protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>DQ023517-1|AAY89648.1| 551|Homo sapiens SLC3A1 variant G protein.
Length = 551
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>DQ023516-1|AAY89647.1| 564|Homo sapiens SLC3A1 variant F protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>DQ023515-1|AAY89646.1| 502|Homo sapiens SLC3A1 variant E protein.
Length = 502
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>DQ023513-1|AAY89644.1| 391|Homo sapiens SLC3A1 variant C protein.
Length = 391
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>DQ023512-1|AAY89643.1| 407|Homo sapiens SLC3A1 variant B protein.
Length = 407
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 37 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 95
>BC132827-1|AAI32828.1| 949|Homo sapiens CCDC66 protein protein.
Length = 949
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 20 DKVNDHRKHYPKRKRRTINHP--*FIIQYNKHTKTYHKNRTKNKKQQQ 157
+K H K YPKR IN P +I K+ K K R + K ++Q
Sbjct: 689 EKQTKHMKKYPKRPDWNINKPPKRYIPASEKYPKQLQKQREEKKVRRQ 736
>BC093626-1|AAH93626.1| 685|Homo sapiens solute carrier family 3,
member 1 protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>BC093624-1|AAH93624.1| 685|Homo sapiens solute carrier family 3
(cystine, dibasic and neutral amino acid transporters,
protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>BC047509-1|AAH47509.1| 831|Homo sapiens coiled-coil domain
containing 66 protein.
Length = 831
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 20 DKVNDHRKHYPKRKRRTINHP--*FIIQYNKHTKTYHKNRTKNKKQQQ 157
+K H K YPKR IN P +I K+ K K R + K ++Q
Sbjct: 571 EKQTKHMKKYPKRPDWNINKPPKRYIPASEKYPKQLQKQREEKKVRRQ 618
>BC022386-1|AAH22386.1| 685|Homo sapiens solute carrier family 3
(cystine, dibasic and neutral amino acid transporters,
protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>BC009771-1|AAH09771.1| 314|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 314
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AY064249-1|AAL55440.1| 314|Homo sapiens BRCA2 and Cip1/p21
interacting protein, splice variant beta protein.
Length = 314
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AY064248-1|AAL55439.1| 322|Homo sapiens BRCA2 and Cip1/p21
interacting protein, splice variant alpha protein.
Length = 322
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AY064247-2|AAL55438.1| 314|Homo sapiens BRCA2 and Cip1/p21
interacting protein protein.
Length = 314
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AY064247-1|AAL55436.1| 322|Homo sapiens BRCA2 and Cip1/p21
interacting protein protein.
Length = 322
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AL360176-8|CAI12093.1| 322|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 322
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AL360176-7|CAI12092.1| 292|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 292
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AL360176-6|CAI12091.1| 314|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 314
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AK223146-1|BAD96866.1| 685|Homo sapiens solute carrier family 3,
member 1 variant protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>AC013717-2|AAX88955.1| 685|Homo sapiens unknown protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
>AB040451-1|BAA92928.1| 314|Homo sapiens TOK-1beta protein.
Length = 314
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AB040450-1|BAA92927.1| 322|Homo sapiens TOK-1alpha protein.
Length = 322
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 233 IKIESYRLGNN-----ATKLQEANLEGALNLTREAKHRAVKALNDANHLQNDIAKTDRQL 397
I+ E+Y L +N LQ+ L+ +N T E ++ NH+ + I +TD
Sbjct: 59 IEFEAYSLSDNDYDGIKKLLQQLFLKAPVN-TAELTDLLIQQ----NHIGSVIKQTDVSE 113
Query: 398 KNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRL 502
+ D + E + F + N+ ++K TQ EQ+ L
Sbjct: 114 DSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQEL 148
>AB033549-1|BAB16841.1| 685|Homo sapiens hrBAT protein.
Length = 685
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 332 AVKALNDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNVNDKKLTQMQEQVDRLET 508
AVK L +A HL+++I Q+ +T Y +F TTQ + ++ +D+ T
Sbjct: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYST 373
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,228,663
Number of Sequences: 237096
Number of extensions: 870837
Number of successful extensions: 2728
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 2558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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