Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00046
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 33 0.091
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 33 0.091
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 33 0.091
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 32 0.21
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 32 0.21
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 31 0.37
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 31 0.37
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 31 0.37
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 31 0.64
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 30 1.1
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 30 1.1
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 30 1.1
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 29 1.5
U49941-3|AAP46281.1| 451|Caenorhabditis elegans Hypothetical pr... 29 1.5
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 29 1.5
L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 2.6
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.6
U61945-6|AAB03129.2| 199|Caenorhabditis elegans Hypothetical pr... 29 2.6
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 29 2.6
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 29 2.6
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 29 2.6
Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 28 4.5
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 27 6.0
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 27 6.0
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 27 6.0
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 27 6.0
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 27 6.0
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.9
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 33.5 bits (73), Expect = 0.091
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = +2
Query: 11 RNDDKVNDHRKHYPKRKRRTINHP*F--IIQYNKHTKTYHKNRTKNKKQQQASK*CDSQN 184
R +K+ +K +RKRR + IIQ+ K K YH+N + + + QN
Sbjct: 263 RVTEKLEKQQKMEQERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKSRKAVMTYHQN 322
Query: 185 KSRKRHFGWYKKRNR*IKIESYRLGNNATKLQEANLEGALNLTREAK-HRAVKALNDANH 361
R+R KK I+ E R+ KL + + EG L E K R V L +
Sbjct: 323 NERER-----KKDE--IRNEKLRM----QKLMQEDEEGYRALLDEKKDQRLVYLLQQTDE 371
Query: 362 LQNDIAKTDRQLKNTDR 412
+ + RQ +NT++
Sbjct: 372 YVDSLCSLVRQHQNTEK 388
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 33.5 bits (73), Expect = 0.091
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = +2
Query: 11 RNDDKVNDHRKHYPKRKRRTINHP*F--IIQYNKHTKTYHKNRTKNKKQQQASK*CDSQN 184
R +K+ +K +RKRR + IIQ+ K K YH+N + + + QN
Sbjct: 263 RVTEKLEKQQKMEQERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKSRKAVMTYHQN 322
Query: 185 KSRKRHFGWYKKRNR*IKIESYRLGNNATKLQEANLEGALNLTREAK-HRAVKALNDANH 361
R+R KK I+ E R+ KL + + EG L E K R V L +
Sbjct: 323 NERER-----KKDE--IRNEKLRM----QKLMQEDEEGYRALLDEKKDQRLVYLLQQTDE 371
Query: 362 LQNDIAKTDRQLKNTDR 412
+ + RQ +NT++
Sbjct: 372 YVDSLCSLVRQHQNTEK 388
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 33.5 bits (73), Expect = 0.091
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = +2
Query: 11 RNDDKVNDHRKHYPKRKRRTINHP*F--IIQYNKHTKTYHKNRTKNKKQQQASK*CDSQN 184
R +K+ +K +RKRR + IIQ+ K K YH+N + + + QN
Sbjct: 263 RVTEKLEKQQKMEQERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKSRKAVMTYHQN 322
Query: 185 KSRKRHFGWYKKRNR*IKIESYRLGNNATKLQEANLEGALNLTREAK-HRAVKALNDANH 361
R+R KK I+ E R+ KL + + EG L E K R V L +
Sbjct: 323 NERER-----KKDE--IRNEKLRM----QKLMQEDEEGYRALLDEKKDQRLVYLLQQTDE 371
Query: 362 LQNDIAKTDRQLKNTDR 412
+ + RQ +NT++
Sbjct: 372 YVDSLCSLVRQHQNTEK 388
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical protein
Y37A1B.1a protein.
Length = 1222
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +3
Query: 24 KLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVT 203
K+ ++ + + E +ST+ + LS I +++ + ++K K+ + H + K+N +
Sbjct: 1054 KMKLLKQVEKERDEAKSTVSEQLSLIEQLREAKAEIDKKKKDIDSHYHKSNKKLNETSAQ 1113
Query: 204 LDGIRKETDKLKSKAID 254
L + E LK D
Sbjct: 1114 LKSTQDENSALKQALQD 1130
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +3
Query: 24 KLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVT 203
K+ ++ + + E +ST+ + LS I +++ + ++K K+ + H + K+N +
Sbjct: 1054 KMKLLKQVEKERDEAKSTVSEQLSLIEQLREAKAEIDKKKKDIDSHYHKSNKKLNETSAQ 1113
Query: 204 LDGIRKETDKLKSKAID 254
L + E LK D
Sbjct: 1114 LKSTQDENSALKQALQD 1130
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = +3
Query: 57 EKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGIRKETDKL 236
E + L N + +L +K ++++ R N++ ++ + ++ LDG+R+E + +
Sbjct: 947 EDRSKQLAESLEQNQKKLDELRSKNDEQLFAHERETNELRRQLQVASLNLDGVRRELEVV 1006
Query: 237 KSKAI 251
+ I
Sbjct: 1007 NNNLI 1011
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = +3
Query: 57 EKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGIRKETDKL 236
E + L N + +L +K ++++ R N++ ++ + ++ LDG+R+E + +
Sbjct: 947 EDRSKQLAESLEQNQKKLDELRSKNDEQLFAHERETNELRRQLQVASLNLDGVRRELEVV 1006
Query: 237 KSKAI 251
+ I
Sbjct: 1007 NNNLI 1011
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = +3
Query: 57 EKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGIRKETDKL 236
E + L N + +L +K ++++ R N++ ++ + ++ LDG+R+E + +
Sbjct: 947 EDRSKQLAESLEQNQKKLDELRSKNDEQLFAHERETNELRRQLQVASLNLDGVRRELEVV 1006
Query: 237 KSKAI 251
+ I
Sbjct: 1007 NNNLI 1011
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 30.7 bits (66), Expect = 0.64
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 99 ITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGIRKETDKLKSK 245
+ N+ ++ +K +Q + ++NR L D ++ +L + D +R ETD + K
Sbjct: 71 MANVYRMKSKNDQDLIDANRKLADSESRYSLVSSQRDKLRIETDAIVKK 119
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQ 154
DD+ R H P K+ H F+ +Y H + +++N +K Q
Sbjct: 529 DDQWAHARTHIPAEKQLNCQHCNFVTEYKHHLEYHYRNHIGSKPFQ 574
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQ 154
DD+ R H P K+ H F+ +Y H + +++N +K Q
Sbjct: 551 DDQWAHARTHIPAEKQLNCQHCNFVTEYKHHLEYHYRNHIGSKPFQ 596
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQ 154
DD+ R H P K+ H F+ +Y H + +++N +K Q
Sbjct: 551 DDQWAHARTHIPAEKQLNCQHCNFVTEYKHHLEYHYRNHIGSKPFQ 596
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = +2
Query: 356 NHLQNDIAKTDRQL-----KNTDRLIEMQYGNFNTTQN 454
NH+QN I DR++ N + +E+QYG T N
Sbjct: 30 NHVQNTITYVDREMAYCERSNDEAALELQYGKMRMTGN 67
>U49941-3|AAP46281.1| 451|Caenorhabditis elegans Hypothetical
protein K10B3.6b protein.
Length = 451
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 188 SRKRHFGWY-KKRNR*IKIESYRLGNNATKLQEANLEGALNLTRE--AKHRAV 337
S K FG Y +KRNR ++I +G++ TK E+ + LNL E AK R +
Sbjct: 396 SMKTTFGRYWRKRNRMLQIGHRGMGSSYTKFVESAGDPFLNLNSETLAKERTL 448
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = +2
Query: 356 NHLQNDIAKTDRQL-----KNTDRLIEMQYGNFNTTQN 454
NH+QN I DR++ N + +E+QYG T N
Sbjct: 51 NHVQNTITYVDREMAYCERSNDEAALELQYGKMRMTGN 88
>L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical
protein C06G4.1 protein.
Length = 886
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Frame = +2
Query: 104 KHTKTYHKNRTKNKKQQQASK*CDSQNKSRKRH------FGWYKKRNR*IKIESYRLGNN 265
KH K Y +N + N + + + N S KRH ++K + + ++Y L +
Sbjct: 383 KHKKHYDRNESGNSSECREEDDYEISNPSEKRHERKKRQRSSHRKESACVDEDNYILDED 442
Query: 266 ATKLQEAN-LEGALNLTREAKH-RAVKALNDANHLQNDIAKTDRQ 394
QE++ +L + RE +H V + ++ +DIA+ R+
Sbjct: 443 RFYQQESDEYHNSLEMEREYEHGMDVGVKKEHSYKCDDIARNARK 487
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 14 NDDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CD-SQNKS 190
+D+ V DH+K + + TIN + +K K HK KNKK + + D + +
Sbjct: 736 HDEDVEDHKKE-KESQSSTINTADEDDESSKKMKK-HKKSKKNKKHHRKEEDGDEDEERK 793
Query: 191 RKRH 202
RK+H
Sbjct: 794 RKKH 797
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/87 (20%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 DFDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKT---EQKIKNSNRHLNDV 173
+ ++ +M+ +++E + ++I DLL + IQK+ K +Q +N N+ + ++
Sbjct: 54 EMKQIQQNVMSELKSVKKELKQATSIKDLLEILEIIQKIFKKQDEFQQVQENQNKSIENL 113
Query: 174 TAKINLGNVTLDGIRKETDKLKSKAID 254
+++ L+ +K+ + + K ID
Sbjct: 114 NSELKTVKAELNETKKQQES-QEKLID 139
>U61945-6|AAB03129.2| 199|Caenorhabditis elegans Hypothetical
protein C49C8.6 protein.
Length = 199
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 326 HRAVKALNDANHLQNDIAKTDRQ-LKNTDRLIEMQYGNFNTTQNVNDKKLTQMQ 484
+R K +D+NH I K ++ K +++IE NF+ T+NV +K+ + Q
Sbjct: 89 NRTGKIDSDSNHNATAIFKCNKNHWKIGEQIIEEIGCNFHCTENVKSRKIEESQ 142
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +3
Query: 36 IENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGI 215
+++++ K+ + + D+ +T I+K + K++ S H+ + VTLDG+
Sbjct: 1181 VDDLLIASKDMEQHLQDVKEALTRIRK----SGMKLRASKCHIAKKEVEYLGHKVTLDGV 1236
Query: 216 RKETDKLKSKAID*ETTPLNYKKL 287
ET ++K+ + + P N K+L
Sbjct: 1237 --ETQEVKTDKMKQFSRPTNVKEL 1258
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +3
Query: 36 IENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGI 215
+++++ K+ + + D+ +T I+K + K++ S H+ + VTLDG+
Sbjct: 1084 VDDLLIASKDMEQHLQDVKEALTRIRK----SGMKLRASKCHIAKKEVEYLGHKVTLDGV 1139
Query: 216 RKETDKLKSKAID*ETTPLNYKKL 287
ET ++K+ + + P N K+L
Sbjct: 1140 --ETQEVKTDKMKQFSRPTNVKEL 1161
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +3
Query: 36 IENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGI 215
+++++ K+ + + D+ +T I+K + K++ S H+ + VTLDG+
Sbjct: 1095 VDDLLIASKDMEQHLQDVKEALTRIRK----SGMKLRASKCHIAKKEVEYLGHKVTLDGV 1150
Query: 216 RKETDKLKSKAID*ETTPLNYKKL 287
ET ++K+ + + P N K+L
Sbjct: 1151 --ETQEVKTDKMKQFSRPTNVKEL 1172
>Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical
protein B0001.6 protein.
Length = 674
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 108 IQKLITKTEQKIKNSNRHLNDVTAKINLGNVTLDGIRKE 224
++K ++ EQ +N+ R L + T ++NL + +RKE
Sbjct: 609 LKKKVSNLEQSAQNTQRTLQNQTRELNLYSTNRSWLRKE 647
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical protein
F36G3.1 protein.
Length = 964
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Frame = +3
Query: 6 FDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAKI 185
+ E+T+++ + I+QR+ + + + + ++N+ NI+ + K + ++ +
Sbjct: 711 YTELTSEIDELCEIVQRKDQELAILKEKVTNVINIENSLKDDVDSQKVIVQRQKEIIENL 770
Query: 186 NLGNVTLDGIRK---ETDKLKSKAID*ETTPLNYKKLI*KEHLILHGRLSTE 332
LD I K E KL+ KA++ E T K + L ++S E
Sbjct: 771 ---REELDAITKKLGEVTKLRDKAVE-EATLYKMKNMERDRFLSREAQMSME 818
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 308 LTREAKHRAVKALNDANHLQNDIAKTDRQLKNTDRLIEMQ 427
LT K+ + AN+L+NDIA D+ TD +Q
Sbjct: 733 LTGSQKYHKALRIATANYLRNDIAIVDKYCHKTDHKTYVQ 772
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical protein
T12D8.9b protein.
Length = 1183
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRK 196
DD V D+ + + K K + + ++KH K H+ + + K +NK K
Sbjct: 1023 DDDVKDNEERHLKEKLKPVESERHHHHHSKHGKKKHQEPEDEEDDDEEEKEEKQKNKEEK 1082
Query: 197 R 199
+
Sbjct: 1083 K 1083
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical protein
T12D8.9a protein.
Length = 1181
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRK 196
DD V D+ + + K K + + ++KH K H+ + + K +NK K
Sbjct: 1021 DDDVKDNEERHLKEKLKPVESERHHHHHSKHGKKKHQEPEDEEDDDEEEKEEKQKNKEEK 1080
Query: 197 R 199
+
Sbjct: 1081 K 1081
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRK 196
DD V D+ + + K K + + ++KH K H+ + + K +NK K
Sbjct: 1023 DDDVKDNEERHLKEKLKPVESERHHHHHSKHGKKKHQEPEDEEDDDEEEKEEKQKNKEEK 1082
Query: 197 R 199
+
Sbjct: 1083 K 1083
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +2
Query: 17 DDKVNDHRKHYPKRKRRTINHP*FIIQYNKHTKTYHKNRTKNKKQQQASK*CDSQNKSRK 196
DD V D+ + + K K + + ++KH K H+ + + K +NK K
Sbjct: 1021 DDDVKDNEERHLKEKLKPVESERHHHHHSKHGKKKHQEPEDEEDDDEEEKEEKQKNKEEK 1080
Query: 197 R 199
+
Sbjct: 1081 K 1081
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 87 LLSNITNIQKLITK-TEQKIKNSNRHLNDVTAKINLGNVTLDGIRKETDKLK 239
++ + T I++L T++KI+ S + L D+ +IN ++ + +DK K
Sbjct: 447 IIDSKTEIEELFEGLTKKKIEKSEKRLYDLERRINKVKISYGKLETHSDKYK 498
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 87 LLSNITNIQKLITK-TEQKIKNSNRHLNDVTAKINLGNVTLDGIRKETDKLK 239
++ + T I++L T++KI+ S + L D+ +IN ++ + +DK K
Sbjct: 447 IIDSKTEIEELFEGLTKKKIEKSEKRLYDLERRINKVKISYGKLETHSDKYK 498
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 125 KNRTKNKKQQQASK*CDSQNKSRKRHFG 208
KNR + +QQ+ K +QN SR+R G
Sbjct: 1042 KNRRRKNRQQKRRKVLRNQNLSRRRRIG 1069
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/64 (21%), Positives = 28/64 (43%)
Frame = +3
Query: 3 DFDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAK 182
+ D++ K + IQ+++ + + TN+ KLIT + K +TA
Sbjct: 1147 ELDDLRKKHQKQRDSIQKQQPARRRNSSIAWIQTNVDKLITNNRRSTKKEKGSRRSLTAS 1206
Query: 183 INLG 194
++ G
Sbjct: 1207 VSSG 1210
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/64 (21%), Positives = 28/64 (43%)
Frame = +3
Query: 3 DFDEMTTKLMTIENIIQREKEGQSTIPDLLSNITNIQKLITKTEQKIKNSNRHLNDVTAK 182
+ D++ K + IQ+++ + + TN+ KLIT + K +TA
Sbjct: 1147 ELDDLRKKHQKQRDSIQKQQPARRRNSSIAWIQTNVDKLITNNRRSTKKEKGSRRSLTAS 1206
Query: 183 INLG 194
++ G
Sbjct: 1207 VSSG 1210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,713,121
Number of Sequences: 27780
Number of extensions: 165737
Number of successful extensions: 758
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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