Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00045
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK126859-1|BAC86725.1| 131|Homo sapiens protein ( Homo sapiens ... 32 2.2
AK128359-1|BAC87398.1| 294|Homo sapiens protein ( Homo sapiens ... 31 2.8
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein. 31 3.8
AL833924-1|CAD38780.1| 1033|Homo sapiens hypothetical protein pr... 31 3.8
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein. 31 3.8
AC006017-3|AAD45822.1| 1813|Homo sapiens WUGSC:H_DJ0981O07.3 pro... 31 3.8
D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein. 30 6.6
BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific pept... 30 6.6
BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein. 30 6.6
AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific prot... 30 6.6
AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens ... 30 6.6
AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific prot... 30 6.6
AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15 pr... 30 8.7
>AK126859-1|BAC86725.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ44911 fis, clone BRAMY3009158. ).
Length = 131
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 255 SNDAIAQHSIPQPYHKSGQIILGKPMEHPVPLDQQMIQTKPHVTRRPSTPQPQFFQTSNP 434
S+D AQ P P+ +G++ LG+ H P + P +RP PQ TS+P
Sbjct: 24 SSDHEAQGVSPGPHLSAGKVHLGQLPLHSSPAPLCVGPATPAKEQRPHLPQAHLAPTSSP 83
>AK128359-1|BAC87398.1| 294|Homo sapiens protein ( Homo sapiens
cDNA FLJ46502 fis, clone THYMU3029795. ).
Length = 294
Score = 31.5 bits (68), Expect = 2.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 428 RSLKELGLWC*RSPCDVW 375
R +E G+WC R PCD+W
Sbjct: 124 REEEEGGIWCERCPCDIW 141
>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
Length = 4911
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 4 TSAPNVPPMKTFSPPHINKPTFGQIHQHLLKNDPNPTQQTPLSIITANNKHGPNNMHLPV 183
+SAP+VP M S IN + QHLL P P P ++++ PN P
Sbjct: 4116 SSAPDVPSMGLVSSHRINPGL--EYRQHLLLRGPPPGSANPPRLVSSYRLKQPNVPFPPT 4173
Query: 184 QTLSVGQSD 210
G D
Sbjct: 4174 SNGLSGYKD 4182
>AL833924-1|CAD38780.1| 1033|Homo sapiens hypothetical protein
protein.
Length = 1033
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 4 TSAPNVPPMKTFSPPHINKPTFGQIHQHLLKNDPNPTQQTPLSIITANNKHGPNNMHLPV 183
+SAP+VP M S IN + QHLL P P P ++++ PN P
Sbjct: 238 SSAPDVPSMGLVSSHRINPGL--EYRQHLLLRGPPPGSANPPRLVSSYRLKQPNVPFPPT 295
Query: 184 QTLSVGQSD 210
G D
Sbjct: 296 SNGLSGYKD 304
>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
Length = 4025
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 4 TSAPNVPPMKTFSPPHINKPTFGQIHQHLLKNDPNPTQQTPLSIITANNKHGPNNMHLPV 183
+SAP+VP M S IN + QHLL P P P ++++ PN P
Sbjct: 3234 SSAPDVPSMGLVSSHRINPGL--EYRQHLLLRGPPPGSANPPRLVSSYRLKQPNVPFPPT 3291
Query: 184 QTLSVGQSD 210
G D
Sbjct: 3292 SNGLSGYKD 3300
>AC006017-3|AAD45822.1| 1813|Homo sapiens WUGSC:H_DJ0981O07.3 protein.
Length = 1813
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 4 TSAPNVPPMKTFSPPHINKPTFGQIHQHLLKNDPNPTQQTPLSIITANNKHGPNNMHLPV 183
+SAP+VP M S IN + QHLL P P P ++++ PN P
Sbjct: 1022 SSAPDVPSMGLVSSHRINPGL--EYRQHLLLRGPPPGSANPPRLVSSYRLKQPNVPFPPT 1079
Query: 184 QTLSVGQSD 210
G D
Sbjct: 1080 SNGLSGYKD 1088
>D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein.
Length = 1696
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 22 PPMKTFSPPHINKPTFGQIHQHLLKNDPNPTQQTP--LSIITANNKHGPNNMHLPVQTLS 195
P + PP N+ G + DP P P L + + GP NM + V+T++
Sbjct: 31 PELLLIPPPLSNRGILGPVQSPCPSRDPAPIPTEPGCLLVEATATEEGPGNMEIIVETVA 90
>BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific
peptidase 42 protein.
Length = 1316
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Frame = +1
Query: 73 QIHQHLLKNDPN-----PTQQTPLSIITAN------NKHGPNNMHLPVQTLSVGQSDIIV 219
Q+ H++KN P+ P + TP S +++ N+ P N VQ SV +S +I
Sbjct: 455 QLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNASASVQNWSVNRSSVIP 514
Query: 220 NQVVKSQITL 249
K +IT+
Sbjct: 515 EHPKKQKITI 524
>BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein.
Length = 1202
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Frame = +1
Query: 73 QIHQHLLKNDPN-----PTQQTPLSIITAN------NKHGPNNMHLPVQTLSVGQSDIIV 219
Q+ H++KN P+ P + TP S +++ N+ P N VQ SV +S +I
Sbjct: 455 QLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNASASVQNWSVNRSSVIP 514
Query: 220 NQVVKSQITL 249
K +IT+
Sbjct: 515 EHPKKQKITI 524
>AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific
protease 42 protein.
Length = 1324
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Frame = +1
Query: 73 QIHQHLLKNDPN-----PTQQTPLSIITAN------NKHGPNNMHLPVQTLSVGQSDIIV 219
Q+ H++KN P+ P + TP S +++ N+ P N VQ SV +S +I
Sbjct: 455 QLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNASASVQNWSVNRSSVIP 514
Query: 220 NQVVKSQITL 249
K +IT+
Sbjct: 515 EHPKKQKITI 524
>AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens
cDNA FLJ12697 fis, clone NT2RP1000522, weakly similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
3.1.2.15). ).
Length = 1198
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Frame = +1
Query: 73 QIHQHLLKNDPN-----PTQQTPLSIITAN------NKHGPNNMHLPVQTLSVGQSDIIV 219
Q+ H++KN P+ P + TP S +++ N+ P N VQ SV +S +I
Sbjct: 455 QLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNASASVQNWSVNRSSVIP 514
Query: 220 NQVVKSQITL 249
K +IT+
Sbjct: 515 EHPKKQKITI 524
>AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific
protease 42 protein.
Length = 1325
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Frame = +1
Query: 73 QIHQHLLKNDPN-----PTQQTPLSIITAN------NKHGPNNMHLPVQTLSVGQSDIIV 219
Q+ H++KN P+ P + TP S +++ N+ P N VQ SV +S +I
Sbjct: 455 QLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNASASVQNWSVNRSSVIP 514
Query: 220 NQVVKSQITL 249
K +IT+
Sbjct: 515 EHPKKQKITI 524
>AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15
protein.
Length = 2789
Score = 29.9 bits (64), Expect = 8.7
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 34 TFSPPHINKPTFGQIHQHLLKNDPNPTQQTPLSII 138
TFSP H G + Q LKN P+PTQ++ LS I
Sbjct: 2468 TFSPDH------GTLLQKFLKNSPDPTQKSCLSDI 2496
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,254,739
Number of Sequences: 237096
Number of extensions: 2167444
Number of successful extensions: 4376
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4374
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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