Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00044
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   3.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   3.8  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   3.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   3.8  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   3.8  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 505 NQPAP*CFSLKFSSSKRSPYI 443
           NQ +  CFSLK  + K  P++
Sbjct: 519 NQNSEMCFSLKLKNKKLPPFL 539


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 129 NEFSSFPCYFYKIRFE 82
           N+ SS P YFY++  E
Sbjct: 401 NKTSSVPIYFYRMSIE 416


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 129 NEFSSFPCYFYKIRFE 82
           N+ SS P YFY++  E
Sbjct: 401 NKTSSVPIYFYRMSIE 416


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 129 NEFSSFPCYFYKIRFE 82
           N+ SS P YFY++  E
Sbjct: 401 NKTSSVPIYFYRMSIE 416


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 129 NEFSSFPCYFYKIRFE 82
           N+ SS P YFY++  E
Sbjct: 401 NKTSSVPIYFYRMSIE 416


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 129 NEFSSFPCYFYKIRFE 82
           N+ SS P YFY++  E
Sbjct: 400 NKTSSVPIYFYRMSIE 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,481
Number of Sequences: 336
Number of extensions: 3381
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)