Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00044
(638 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 97 2e-21
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 82 6e-17
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 79 4e-16
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 71 1e-13
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 67 2e-12
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 65 9e-12
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 51 2e-07
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 40 4e-04
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 32 0.080
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 30 0.32
SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces... 27 1.7
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 5.3
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 5.3
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 7.0
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 96.7 bits (230), Expect = 2e-21
Identities = 48/83 (57%), Positives = 53/83 (63%)
Frame = +3
Query: 261 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 440
+G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI NFMIQ +
Sbjct: 40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGK 99
Query: 441 SIYGERFEDENFKLKHYGAGWLS 509
SIYG RF DENFKL H G LS
Sbjct: 100 SIYGSRFPDENFKLSHQRPGLLS 122
Score = 82.2 bits (194), Expect = 6e-17
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
L+ MANAG D+NGSQFFITTVKTPWLDG HVVFG+VL G D+V+KI
Sbjct: 120 LLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 82.2 bits (194), Expect = 6e-17
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
L+ MANAG +TNGSQFFITTV TPWLDG+HVVFG+V EGMDVV+K+
Sbjct: 95 LLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKV 140
Score = 79.8 bits (188), Expect = 3e-16
Identities = 41/83 (49%), Positives = 46/83 (55%)
Frame = +3
Query: 261 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 440
+G IV LF VPKT NF L +G GY GS FHRVI FM+Q +
Sbjct: 15 LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGK 74
Query: 441 SIYGERFEDENFKLKHYGAGWLS 509
SIYGE+F DENF LKH G LS
Sbjct: 75 SIYGEKFPDENFALKHNKPGLLS 97
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 79.4 bits (187), Expect = 4e-16
Identities = 41/78 (52%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +3
Query: 267 TIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNFMIQXXXXXXXXXXX 434
TI LF VPKT +NF L E +G YKGS+FHRVIKNFM+Q
Sbjct: 18 TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTG 77
Query: 435 XRSIYGERFEDENFKLKH 488
SIYGE+FEDENF+LKH
Sbjct: 78 GESIYGEKFEDENFELKH 95
Score = 70.9 bits (166), Expect = 1e-13
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +2
Query: 497 WLVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
+L+ MANAG +TNGSQFFITTV TP LDG+HVVFGKV++G V+ I
Sbjct: 99 FLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTI 145
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 70.9 bits (166), Expect = 1e-13
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
L+ MANAGKD+NG QFFITTV +LDG+HVVFG+V+EG D+V++I
Sbjct: 105 LLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEI 150
Score = 62.1 bits (144), Expect = 7e-11
Identities = 43/105 (40%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Frame = +3
Query: 261 IGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVIKNFMIQXXXXX 416
+G I I LF VPKT ENF Q QKP G YK S FHR+I+ FMIQ
Sbjct: 18 LGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRIIQGFMIQGGDFV 75
Query: 417 XXXXXXXRSIYGER-FEDENFKLKHYGAGWLSWLMQAKTQMDLNF 548
+I+ R F DENF LKH G LS K F
Sbjct: 76 SGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQF 120
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +2
Query: 503 VIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
V MAN+G +TNGSQFFITT TPWLDG+H +F + G+DVV +I
Sbjct: 541 VSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRI 585
Score = 41.9 bits (94), Expect = 8e-05
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 443
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ-GGDPLGDGTGGES 519
Query: 444 IYGERFEDE-NFKLKH 488
I+ + FEDE + LKH
Sbjct: 520 IWKKDFEDEISPNLKH 535
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 64.9 bits (151), Expect = 9e-12
Identities = 25/46 (54%), Positives = 36/46 (78%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
++ MANAG +TN SQFFIT TPWLDG+H +FG+V+ G+ V +++
Sbjct: 87 ILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
Score = 57.6 bits (133), Expect = 1e-09
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 437
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQ-GGDPTGTGRGG 64
Query: 438 RSIYGERFEDE-NFKLKHYGAGWLS 509
SIYG++F+DE + L H GAG LS
Sbjct: 65 TSIYGDKFDDEIHSDLHHTGAGILS 89
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 50.8 bits (116), Expect = 2e-07
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
++ MAN GK+TNGSQFFI LD +H +FG+V+ G++V+ +
Sbjct: 361 IISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDAL 406
Score = 38.3 bits (85), Expect = 0.001
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 258 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 437
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQ-GGDPSGTGRGG 338
Query: 438 RSIYGERFEDENFK-LKHYGAGWLSWLMQAK 527
+SI+G+ F+DE LKH G +S + K
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGK 369
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 39.5 bits (88), Expect = 4e-04
Identities = 29/69 (42%), Positives = 33/69 (47%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 443
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 444 IYGERFEDE 470
IYGE F E
Sbjct: 78 IYGEPFAVE 86
Score = 34.3 bits (75), Expect = 0.015
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 610
LV MA + N SQFFIT TP +G+ +FG+V+
Sbjct: 98 LVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 31.9 bits (69), Expect = 0.080
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 261 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 401
+G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQ 52
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 536 GSQFFIT-TVKTPWLDGRHVVFGKVLEGMDVVQKI 637
GSQF IT + LD R+ ++G+V EG D + KI
Sbjct: 112 GSQFIITLSDNLEGLDERYPIYGQVAEGFDTLLKI 146
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 29.9 bits (64), Expect = 0.32
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 269 STNIVSPIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 108
S NI PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3524 SKNIYVPIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 475
Score = 27.5 bits (58), Expect = 1.7
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -1
Query: 362 PFVPLPLRFLS*LKEVLSCLRYSLSK*SNHNSTN---IVSPIFMSKLTL*VTLGPLGISS 192
PFVP F S V S + S S SN N N I +P+F S T+ + P+G SS
Sbjct: 371 PFVPPNTTFESPFANVTS--KISASGFSNDNPANKNIIQTPMFGSSNTIDGPINPIGASS 428
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 440 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 288
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 123 FSSFPCYFYKIRFECLFFQNLRY 55
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 79 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 231
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,722,143
Number of Sequences: 5004
Number of extensions: 55241
Number of successful extensions: 137
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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