Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00043
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.0  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 664 GFNFNLILTWNFNEFLNLFDDL 729
           G +F LI++++   F+N  DDL
Sbjct: 201 GISFLLIISYSTLHFVNYIDDL 222


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +2

Query: 176 QPLSTWYLPSLYV*SPS---RNSHPSVV 250
           Q  ++W+ PS+Y  SP    R+ +PS +
Sbjct: 183 QVAASWHTPSMYPLSPGAGFRSPYPSAL 210


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +2

Query: 176 QPLSTWYLPSLYV*SPS---RNSHPSVV 250
           Q  ++W+ PS+Y  SP    R+ +PS +
Sbjct: 75  QVAASWHTPSMYPLSPGAGFRSPYPSAL 102


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 389 TIFHTTAILH 418
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 389 TIFHTTAILH 418
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 619 CKIIQIVLEATFIL*IYTLVCSHNKMFQIYY 527
           C  I   +   F+L IY   C+   +  IYY
Sbjct: 270 CAFIIFTMHLLFLLCIYYFYCALIILLCIYY 300


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 389 TIFHTTAILH 418
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,633
Number of Sequences: 336
Number of extensions: 3347
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)