Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00042
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    26   1.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   3.3  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    24   4.4  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    24   4.4  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = +2

Query: 218 VNLNFNAREKFSTTRKKYSKTILWRYAYSCCCFRKVTQEIFSIHSKYSKCSYNYIT 385
           + +N + R   STTR+  + T L+RY ++   + K+  ++ S+ +    CS N+I+
Sbjct: 323 IRINSSTRRN-STTRQNSTTTALYRYNFAKADYVKL-NDMISMFNNSFHCS-NFIS 375


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +2

Query: 566 LRMEKE---LQEAFAFLEDSYTRDHYVSKEPQT 655
           L +EK    +Q A+ F+ DS+  D +V  +P+T
Sbjct: 207 LELEKHQNMMQMAWNFMNDSFRTDVFVRYQPET 239


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = +1

Query: 64  GIHWKDWRGLCAIKFLRLEEFID 132
           GIH ++W G+ ++ ++ + EF++
Sbjct: 185 GIHAREWAGVMSVMYM-IHEFVE 206


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = +1

Query: 64  GIHWKDWRGLCAIKFLRLEEFID 132
           GIH ++W G+ ++ ++ + EF++
Sbjct: 185 GIHAREWAGVMSVMYM-IHEFVE 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,408
Number of Sequences: 2352
Number of extensions: 15933
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)