Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00041
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 73 2e-13
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 73 2e-13
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 38 0.011
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 38 0.011
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 38 0.011
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 31 0.75
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 31 0.75
U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical pr... 31 0.99
AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical ... 31 0.99
AF016675-4|AAB66137.1| 356|Caenorhabditis elegans Hypothetical ... 30 2.3
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 29 3.0
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 3.0
Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical p... 29 4.0
U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine rec... 29 4.0
DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein. 29 4.0
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 29 5.3
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 29 5.3
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 9.2
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 9.2
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 9.2
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 9.2
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +2
Query: 293 IRDGNAVDPASELDEECHVYTDRYK-TTYSVVLSLADVVAQKNSFYKLQILKHNKENRYW 469
I+ G VD L + CHV+ + + Y LS D+ KNS+YK+Q+LK ++ Y+
Sbjct: 449 IKKGTVVDAKFALADRCHVFKNEIDGSLYQATLSFTDLTQNKNSYYKIQLLKDDQRENYY 508
Query: 470 LFRSWGRIGTTIGAVK 517
+FRSWGR+GT +G K
Sbjct: 509 VFRSWGRVGTEVGGNK 524
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +1
Query: 511 SKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNETKT---LT 681
+K E + + A+ +FQ ++ EKT+N W R +F K+PG + +E DY + T +T
Sbjct: 523 NKHESYSNSNEAILKFQDVFHEKTKNDWIYRKHFRKMPGMFSYVETDYSEFAQITDTEIT 582
Query: 682 VDPKCELAEPVQRLIVTIFDIHYMK 756
K L + V+ ++++IFD+ MK
Sbjct: 583 PGSKTLLPKSVKEVVMSIFDVENMK 607
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans
Poly(adp-ribose) metabolism enzymeprotein 1 protein.
Length = 945
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +2
Query: 293 IRDGNAVDPASELDEECHVYTDRYK-TTYSVVLSLADVVAQKNSFYKLQILKHNKENRYW 469
I+ G VD L + CHV+ + + Y LS D+ KNS+YK+Q+LK ++ Y+
Sbjct: 449 IKKGTVVDAKFALADRCHVFKNEIDGSLYQATLSFTDLTQNKNSYYKIQLLKDDQRENYY 508
Query: 470 LFRSWGRIGTTIGAVK 517
+FRSWGR+GT +G K
Sbjct: 509 VFRSWGRVGTEVGGNK 524
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +1
Query: 511 SKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNETKT---LT 681
+K E + + A+ +FQ ++ EKT+N W R +F K+PG + +E DY + T +T
Sbjct: 523 NKHESYSNSNEAILKFQDVFHEKTKNDWIYRKHFRKMPGMFSYVETDYSEFAQITDTEIT 582
Query: 682 VDPKCELAEPVQRLIVTIFDIHYMK 756
K L + V+ ++++IFD+ MK
Sbjct: 583 PGSKTLLPKSVKEVVMSIFDVENMK 607
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +2
Query: 350 YTDRYKTTYSVVLSLADVVAQK---NSFYKLQILKHNKENRYWLFRSWGRIGTTIG 508
+ D + + V+++ D++ + ++FY++QI+K + LF +WGRIG+ +G
Sbjct: 1754 FCDETQQYFDVLMNKTDLMYGRCGFHNFYRMQIIKRRDAELFILFTNWGRIGSGMG 1809
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +2
Query: 350 YTDRYKTTYSVVLSLADVVAQK---NSFYKLQILKHNKENRYWLFRSWGRIGTTIG 508
+ D + + V+++ D++ + ++FY++QI+K + LF +WGRIG+ +G
Sbjct: 1792 FCDETQQYFDVLMNKTDLMYGRCGFHNFYRMQIIKRRDAELFILFTNWGRIGSGMG 1847
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +2
Query: 350 YTDRYKTTYSVVLSLADVVAQK---NSFYKLQILKHNKENRYWLFRSWGRIGTTIG 508
+ D + + V+++ D++ + ++FY++QI+K + LF +WGRIG+ +G
Sbjct: 1754 FCDETQQYFDVLMNKTDLMYGRCGFHNFYRMQIIKRRDAELFILFTNWGRIGSGMG 1809
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +1
Query: 511 SKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNETK 672
++++ DLD A F++ + EKT W++R++ +P +Y +E+ +T+
Sbjct: 55 TQLKDFDDLDRAKKFFESKFYEKTHLHWEERDD-EPVPNKYAVVELATNARQTE 107
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +1
Query: 511 SKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNETK 672
++++ DLD A F++ + EKT W++R++ +P +Y +E+ +T+
Sbjct: 55 TQLKDFDDLDRAKKFFESKFYEKTHLHWEERDD-EPVPNKYAVVELATNARQTE 107
>U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical
protein C18F10.2 protein.
Length = 711
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -3
Query: 602 LSFQRFSVFSSYSAWNLSKALSRSFIFSTLLRRSLCRSDPT 480
L FQ F +F + SA+N+S +RSF+F +L LC + T
Sbjct: 3 LFFQHFLLFYAASAYNVSVNTNRSFLFGDVL-EPLCSINVT 42
>AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical
protein C36C9.5 protein.
Length = 484
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +1
Query: 478 FVGSDRHNDRRSKVEKMKDLDNALDRFQALYEEKTENRW-KDRNNFVKIPGRYF-PLEID 651
F ++H ++ ++ + ++ F+ + + T+N + RN+FV PG +F +E+
Sbjct: 176 FTNEEKHAKKKKIKRELFEQEDLQTNFRGIQKTPTKNSLEQSRNDFV-APGPFFTKMEVS 234
Query: 652 YGDNETKTLTVDPKCE 699
G +E +T+ KCE
Sbjct: 235 EGSSE-ETMDYRRKCE 249
>AF016675-4|AAB66137.1| 356|Caenorhabditis elegans Hypothetical
protein T27B7.5 protein.
Length = 356
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +1
Query: 610 FVKIPGRYFPLEIDYGDNETKTLTVDPK-----CEL-AEPVQRLIVTIFDIHYMKQTCSN 771
F+ P +F + +D+ N +K +DP CEL A+ +VT + +
Sbjct: 28 FLYPPVLHFLISLDFFSNNSKKPNMDPGLVCRICELQADGTHFGVVTCRACAVFFRRSTT 87
Query: 772 SSWTQRKCLSES 807
S W +RKC++ S
Sbjct: 88 SKWIKRKCMARS 99
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -1
Query: 538 RDLSSSRLYCADRCAD-PTPRTEQPVSVLFIMFQDLQFVERVLLSDNISEREHDRVRCFV 362
+D S+ + +D C + P P + P I+F DL ++ + + H+ + CF
Sbjct: 809 KDKSNILVTTSDNCEEIPDPSSIDPNKKTLIIFDDLMLEKQNKIEQYYTRGRHNNIDCFY 868
Query: 361 AVRVHVAL 338
+ ++ L
Sbjct: 869 ISQNYIKL 876
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -1
Query: 538 RDLSSSRLYCADRCAD-PTPRTEQPVSVLFIMFQDLQFVERVLLSDNISEREHDRVRCFV 362
+D S+ + ++ C D P P + P I+F DL ++ + + H+ + CF
Sbjct: 773 KDKSNILVTTSENCEDIPDPSSIDPNKKTLIIFDDLMLEKQNKIEQYYTRGRHNNIDCFY 832
Query: 361 AVRVHVAL 338
+ ++ L
Sbjct: 833 ISQNYIKL 840
>Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 729 DDESLHGLGELTLGVDSECFRLIVTVVYFQREVSPRNLDKVIPVFPTVLSFFFVQR 562
DD+SL +G LG F+ + ++YF E NL ++ T S +V+R
Sbjct: 93 DDDSLKKIGISALGARKTIFQAVSLLLYFCHESEHENLQRLAQQVKT--SCLYVER 146
>Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 729 DDESLHGLGELTLGVDSECFRLIVTVVYFQREVSPRNLDKVIPVFPTVLSFFFVQR 562
DD+SL +G LG F+ + ++YF E NL ++ T S +V+R
Sbjct: 93 DDDSLKKIGISALGARKTIFQAVSLLLYFCHESEHENLQRLAQQVKT--SCLYVER 146
>U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 40 protein.
Length = 363
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 635 KYRPGILTKLFLSFQRFSVFSSYSAWNL 552
K RPG+ + Q F+ +YSAWNL
Sbjct: 166 KDRPGVYIFAIVFIQTFTALVAYSAWNL 193
>DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein.
Length = 801
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 729 DDESLHGLGELTLGVDSECFRLIVTVVYFQREVSPRNLDKVIPVFPTVLSFFFVQR 562
DD+SL +G LG F+ + ++YF E NL ++ T S +V+R
Sbjct: 93 DDDSLKKIGISALGARKTIFQAVSLLLYFCHESEHENLQRLAQQVKT--SCLYVER 146
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +2
Query: 269 EKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKH 448
E+S +K + +G+++ ELDE ++ +D + TYS+V + + N + + K
Sbjct: 726 ERSPMKKENTNGSSMH--DELDENDYLKSDIHPGTYSLVAVVCHLGDSPNKGHYVAYTKE 783
Query: 449 NKENRYWL 472
+N WL
Sbjct: 784 LYKNSSWL 791
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +2
Query: 269 EKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKH 448
E+S +K + +G+++ ELDE ++ +D + TYS+V + + N + + K
Sbjct: 726 ERSPMKKENTNGSSMH--DELDENDYLKSDIHPGTYSLVAVVCHLGDSPNKGHYVAYTKE 783
Query: 449 NKENRYWL 472
+N WL
Sbjct: 784 LYKNSSWL 791
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 502 DRRSKVEKMKDLDNALDRFQALYEEKTENRWKDR 603
D EK +DLD+ L + + EEK E+R K++
Sbjct: 918 DLEDSHEKSRDLDDKLRKMELTDEEKEEDRKKEQ 951
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 502 DRRSKVEKMKDLDNALDRFQALYEEKTENRWKDR 603
D EK +DLD+ L + + EEK E+R K++
Sbjct: 918 DLEDSHEKSRDLDDKLRKMELTDEEKEEDRKKEQ 951
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 502 DRRSKVEKMKDLDNALDRFQALYEEKTENRWKDR 603
D EK +DLD+ L + + EEK E+R K++
Sbjct: 678 DLEDSHEKSRDLDDKLRKMELTDEEKEEDRKKEQ 711
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 502 DRRSKVEKMKDLDNALDRFQALYEEKTENRWKDR 603
D EK +DLD+ L + + EEK E+R K++
Sbjct: 918 DLEDSHEKSRDLDDKLRKMELTDEEKEEDRKKEQ 951
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,598,368
Number of Sequences: 27780
Number of extensions: 360401
Number of successful extensions: 1150
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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