Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00039
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   3.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.9  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 8   ENCPICCYELYYLS 49
           +NC I  +ELYYLS
Sbjct: 256 KNCVIVIFELYYLS 269


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 477 APQPWLHNQ 451
           AP+PW+HN+
Sbjct: 214 APRPWIHNE 222


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 172 IDNNHLEGTNGSMNMTDNSLGGGD 243
           +D NHLE T  +  M D S+   D
Sbjct: 1   MDENHLEQTLENAGMPDESINISD 24


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = -3

Query: 477 APQPWLHNQ 451
           AP+PW++N+
Sbjct: 214 APRPWIYNE 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,247
Number of Sequences: 336
Number of extensions: 3404
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)