Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00038
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p pro...    29   5.1  
AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA ...    29   5.1  
AY071746-1|AAL49368.1|   96|Drosophila melanogaster RH52516p pro...    29   8.9  
AY071011-1|AAL48633.1|   96|Drosophila melanogaster RE09176p pro...    29   8.9  
AL021106-9|CAA15943.1|   96|Drosophila melanogaster EG:63B12.12 ...    29   8.9  
AE014298-278|AAF45682.1|   96|Drosophila melanogaster CG14818-PA...    29   8.9  

>AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p
           protein.
          Length = 1674

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 143 ILGSYVTSPLH*PPTKNLPGSSSRSNGDNI 54
           + G Y  +P H   TK LP S  R+NG  I
Sbjct: 82  LFGGYRITPKHCRATKTLPSSDPRANGPTI 111


>AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA
           protein.
          Length = 1629

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 143 ILGSYVTSPLH*PPTKNLPGSSSRSNGDNI 54
           + G Y  +P H   TK LP S  R+NG  I
Sbjct: 82  LFGGYRITPKHCRATKTLPSSDPRANGPTI 111


>AY071746-1|AAL49368.1|   96|Drosophila melanogaster RH52516p
           protein.
          Length = 96

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 107 PPTKNLPGSSSRSNGDNIDEYRLYAVEDNENTLDA 3
           P   + P SS  S   N+ E  L  +ED  N+LDA
Sbjct: 3   PKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDA 37


>AY071011-1|AAL48633.1|   96|Drosophila melanogaster RE09176p
           protein.
          Length = 96

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 107 PPTKNLPGSSSRSNGDNIDEYRLYAVEDNENTLDA 3
           P   + P SS  S   N+ E  L  +ED  N+LDA
Sbjct: 3   PKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDA 37


>AL021106-9|CAA15943.1|   96|Drosophila melanogaster EG:63B12.12
           protein.
          Length = 96

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 107 PPTKNLPGSSSRSNGDNIDEYRLYAVEDNENTLDA 3
           P   + P SS  S   N+ E  L  +ED  N+LDA
Sbjct: 3   PKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDA 37


>AE014298-278|AAF45682.1|   96|Drosophila melanogaster CG14818-PA
           protein.
          Length = 96

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 107 PPTKNLPGSSSRSNGDNIDEYRLYAVEDNENTLDA 3
           P   + P SS  S   N+ E  L  +ED  N+LDA
Sbjct: 3   PKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDA 37


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,027,113
Number of Sequences: 53049
Number of extensions: 623182
Number of successful extensions: 1290
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)