Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00035
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 134 5e-32
09_06_0359 + 22508900-22509439 131 6e-31
02_01_0160 + 1116160-1116678 130 1e-30
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 129 3e-30
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 111 4e-25
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 109 2e-24
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 109 2e-24
10_01_0309 + 3417602-3418147 108 5e-24
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 102 3e-22
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 102 3e-22
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 97 1e-20
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 92 5e-19
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 89 3e-18
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 87 2e-17
06_01_0214 + 1634171-1634173,1634263-1634742 78 8e-15
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 71 7e-13
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 66 2e-11
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 59 4e-09
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 58 9e-09
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 56 2e-08
02_01_0086 + 613113-613532 50 1e-06
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 44 9e-05
01_01_0077 - 585670-585787,585921-586687 42 4e-04
08_02_0053 + 11721658-11721689,11721960-11722710 37 0.014
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 37 0.019
10_01_0310 + 3425099-3425218 37 0.019
05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-48... 32 0.54
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439... 30 2.2
12_02_0854 + 23697826-23698033,23699111-23699276,23699430-236994... 29 2.9
10_08_1022 + 22337332-22339398 29 3.8
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 29 5.0
06_01_0719 + 5239238-5239635,5239735-5239945,5240379-5240454,524... 28 6.6
03_06_0769 + 36134298-36134356,36134740-36134919,36134975-361350... 28 6.6
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 6.6
02_05_1351 - 35855543-35856751 28 6.6
01_06_1312 - 36205549-36206649,36207558-36207883,36209083-362091... 28 6.6
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 134 bits (325), Expect = 5e-32
Identities = 60/84 (71%), Positives = 69/84 (82%)
Frame = +3
Query: 258 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 437
GG+SIYG KF DENF +KHTGPG+LSMANAG DTNGSQFFITTV TSWLDG+HVVFG V+
Sbjct: 128 GGESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVL 187
Query: 438 EGMEVVKQIETFGSQSGKTSKRIV 509
GM+VV +IE G QSG ++V
Sbjct: 188 SGMDVVYKIEAEGQQSGSPKSKVV 211
Score = 92.3 bits (219), Expect = 4e-19
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 7/77 (9%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 210
+V+FDV +D P G++V+ L PKT ENFRALCTGEKG G +KGS FHR+I
Sbjct: 52 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRII 111
Query: 211 PNFMLQGGDFTNHNGLG 261
P+FM+QGGDFT +G G
Sbjct: 112 PSFMIQGGDFTLGDGRG 128
>09_06_0359 + 22508900-22509439
Length = 179
Score = 131 bits (316), Expect = 6e-31
Identities = 62/112 (55%), Positives = 80/112 (71%)
Frame = +3
Query: 174 LRLQGLHFPSCHPQFHAARRGLHQP*RTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 353
L +G F P F + TGG+SIYG++F DENF L+HTGPGVLSMANAG
Sbjct: 55 LHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGP 114
Query: 354 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIV 509
+TNGSQFFI T +T+WLDG+HVVFG VV+G VV+++E GS SG T++R++
Sbjct: 115 NTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGGTAERVL 166
Score = 102 bits (245), Expect = 3e-22
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Frame = +1
Query: 49 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 207
P+VFFD+ + A G++V+EL +D PKT ENFR LCTGEKG G YKGS FHR+
Sbjct: 6 PKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRI 65
Query: 208 IPNFMLQGGDFTNHNGLG 261
IPNFM QGGDFT NG G
Sbjct: 66 IPNFMCQGGDFTRGNGTG 83
>02_01_0160 + 1116160-1116678
Length = 172
Score = 130 bits (313), Expect = 1e-30
Identities = 64/112 (57%), Positives = 75/112 (66%)
Frame = +3
Query: 174 LRLQGLHFPSCHPQFHAARRGLHQP*RTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 353
L +G F P+F + TGG+SIYG KF DE F KH PG+LSMANAG
Sbjct: 53 LHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGP 112
Query: 354 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIV 509
+TNGSQFFI TV SWLDG+HVVFG VVEGM+VVK IE GS+ G T+K +V
Sbjct: 113 NTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVV 164
Score = 103 bits (247), Expect = 1e-22
Identities = 52/81 (64%), Positives = 57/81 (70%), Gaps = 7/81 (8%)
Frame = +1
Query: 40 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 198
MS RVFFD+TV AP G+IV+EL + P+T ENFRALCTGEKG G YKGS F
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 199 HRVIPNFMLQGGDFTNHNGLG 261
HRVIP FM QGGDFT NG G
Sbjct: 61 HRVIPEFMCQGGDFTRGNGTG 81
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 129 bits (311), Expect = 3e-30
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGGKSIYG F+DENF L HTGPGV+SMANAG +TNGSQFFI TVKT WLDGRHVVFG V
Sbjct: 155 TGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQV 214
Query: 435 VEGMEVVKQIETFGSQSGKTSKRIV 509
+EGM++VK IE+ + G K+ V
Sbjct: 215 IEGMDIVKMIESQETDRGDRPKKKV 239
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Frame = +1
Query: 52 RVFFDVTVDDAP---LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFM 222
+V+FD+++ + +G++VI L D P+T ENFRALCTGEKGFGYKGS FHRVI +FM
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFM 143
Query: 223 LQGGDFTNHNGLG 261
+QGGDF NG G
Sbjct: 144 IQGGDFDKGNGTG 156
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 111 bits (268), Expect = 4e-25
Identities = 52/85 (61%), Positives = 63/85 (74%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TG SIYG F DENF + H+ PG+LSMAN DTNGSQFFITTVK + LDG+HVVFG V
Sbjct: 116 TGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKV 175
Query: 435 VEGMEVVKQIETFGSQSGKTSKRIV 509
+ GM+VV +IE GSQSG +++
Sbjct: 176 LSGMDVVYKIEAEGSQSGTPRSKVL 200
Score = 92.7 bits (220), Expect = 3e-19
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 7/77 (9%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 210
+VFFD+T++ P G+IV+ L + PKT ENFRA+CTGEKG G YKG+ FHR+I
Sbjct: 41 KVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRII 100
Query: 211 PNFMLQGGDFTNHNGLG 261
P FM+QGGD + NG G
Sbjct: 101 PGFMIQGGDTVSGNGTG 117
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 109 bits (263), Expect = 2e-24
Identities = 50/71 (70%), Positives = 58/71 (81%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG+SIYG FEDENF LKH G+LSMANAG DTNGSQFFITT +T LDG+HVVFG V
Sbjct: 124 TGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRTPHLDGKHVVFGRV 183
Query: 435 VEGMEVVKQIE 467
++GM VV+ +E
Sbjct: 184 IKGMGVVRSME 194
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 22/93 (23%)
Frame = +1
Query: 49 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG---------------- 180
PR + DV++ G+IV+EL + V P+T ENFRALCTGEKG
Sbjct: 33 PRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAA 92
Query: 181 ------YKGSIFHRVIPNFMLQGGDFTNHNGLG 261
KGS HR++ FM+QGGD T +G G
Sbjct: 93 SVCTRWTKGSCIHRIVKGFMVQGGDITAGDGTG 125
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 109 bits (262), Expect = 2e-24
Identities = 49/71 (69%), Positives = 59/71 (83%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG+SIYG KFEDENF LKH G+LSMAN+G +TNGSQFFITT +T LDG+HVVFG V
Sbjct: 142 TGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGRV 201
Query: 435 VEGMEVVKQIE 467
++GM VV+ +E
Sbjct: 202 IKGMGVVRSVE 212
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +1
Query: 49 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG 180
PR F DV++ G+IVIEL + V P+T ENFRALCTGEKG G
Sbjct: 26 PRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVG 69
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 169 KGFGYKGSIFHRVIPNFMLQGGDFTNHNGLG 261
K F +GS FHRVI FM+QGGD T +G G
Sbjct: 113 KIFHVQGSCFHRVIKGFMVQGGDITAGDGTG 143
>10_01_0309 + 3417602-3418147
Length = 181
Score = 108 bits (259), Expect = 5e-24
Identities = 58/118 (49%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Frame = +3
Query: 165 RERLRLQGLHFPSCHPQFHAARRGLHQP*RTGGKSIY---GNKFEDENFTLKHTGPGVLS 335
+ RL +G F P F + TGG+S F DE F +KH GPGV+S
Sbjct: 57 KSRLHYKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVS 116
Query: 336 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIV 509
MANAG +TNGSQFFIT K WLDGRHV FG VV GM V+ I+ G+ SGKT K +V
Sbjct: 117 MANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVV 174
Score = 85.8 bits (203), Expect = 3e-17
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 7/80 (8%)
Frame = +1
Query: 43 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFH 201
S PRVF D+ + +G++VIEL +D P T ENFR LCTGE+ YKGS FH
Sbjct: 9 SNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFH 68
Query: 202 RVIPNFMLQGGDFTNHNGLG 261
RV+P FM QGGD T NG G
Sbjct: 69 RVVPGFMCQGGDITAGNGTG 88
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 102 bits (245), Expect = 3e-22
Identities = 44/70 (62%), Positives = 54/70 (77%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 231
+ FFDV V P G+IVI L +V PKT +NFRALCTG+KG+GYKG FHR+I +FM+QG
Sbjct: 67 KCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMIQG 126
Query: 232 GDFTNHNGLG 261
GDF N+NG G
Sbjct: 127 GDFQNNNGTG 136
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTS 398
TGG+SIYG F+DENFTLKHTGPGVLSMANAG DTNGSQFFI TVK S
Sbjct: 135 TGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVKFS 182
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 102 bits (244), Expect = 3e-22
Identities = 48/72 (66%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 TGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 431
TGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VFG
Sbjct: 556 TGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGR 615
Query: 432 VVEGMEVVKQIE 467
VV+GM+VV+QIE
Sbjct: 616 VVKGMDVVQQIE 627
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/78 (38%), Positives = 39/78 (50%)
Frame = +1
Query: 4 VL*IAYIANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGY 183
+L ++ + T SLP D V +G I + L + PKT ENF C G+ Y
Sbjct: 480 LLAVSDLGKTATTSLP----DNLVMHTSMGDIHLRLYPEECPKTVENFTTHC--RNGY-Y 532
Query: 184 KGSIFHRVIPNFMLQGGD 237
IFHRVI FM+Q GD
Sbjct: 533 DNLIFHRVIKGFMIQTGD 550
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Frame = +3
Query: 258 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
GG+SIYG KFEDE LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG V
Sbjct: 71 GGESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRV 130
Query: 435 VEGMEVVKQIETFGSQSGKTSKRIVSKTVVR 527
+GME+VK++ + Q+ K+ + I ++R
Sbjct: 131 SKGMEIVKRLGSV--QTDKSDRPIHEVKILR 159
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +1
Query: 64 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFT 243
+VT++ + +G IE+ PKTC NF L +G+ Y IFHR+I +F++QGGD T
Sbjct: 11 EVTLETS-MGAFTIEMYYKHAPKTCRNFLEL--SRRGY-YDNVIFHRIIKDFIVQGGDPT 66
Query: 244 NHNGLGES 267
GES
Sbjct: 67 GTGRGGES 74
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 91.9 bits (218), Expect = 5e-19
Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Frame = +1
Query: 37 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 192
K P VF DV++ D P ++V EL +DV P+T ENFRALCTGE G G YKGS
Sbjct: 3 KKKNPIVFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGS 62
Query: 193 IFHRVIPNFMLQGGDFTNHNGLG 261
+FHRVI FM QGGDF+N +G G
Sbjct: 63 LFHRVIKGFMAQGGDFSNGDGSG 85
Score = 89.4 bits (212), Expect = 3e-18
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
+GG+SIYG FEDENF L+H G+LSMANAG +TNGSQFFIT S LD + VFG +
Sbjct: 84 SGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHNSRLDRKSTVFGKL 143
Query: 435 VEGMEVVKQIE 467
+ G +V+K+IE
Sbjct: 144 ILGNDVLKRIE 154
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 11/87 (12%)
Frame = +1
Query: 34 GKMSLP----RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG------- 180
G++ LP RV+ DV +D +G+IVI L DV PKT NFRALCTGE+G G
Sbjct: 29 GEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLH 88
Query: 181 YKGSIFHRVIPNFMLQGGDFTNHNGLG 261
YKGS FHR+IP FM+QGGD +G G
Sbjct: 89 YKGSRFHRIIPGFMIQGGDIVRGDGKG 115
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +3
Query: 327 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKR 503
V++MAN+G D+NGSQF+ITT+KTSWLDG HVVFG V++GM+ V IE G+ +GK K+
Sbjct: 117 VIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKK 176
Query: 504 IV 509
+V
Sbjct: 177 VV 178
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
Frame = +1
Query: 49 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE---KGF--GYKGSIFHRVIP 213
P VFFDVT+ P G+I +EL +D+ PKT ENFR CTGE G GYKG FHRVI
Sbjct: 37 PVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIK 96
Query: 214 NFMLQGGDFTNHNGLG 261
+FM+QGGD+ +G G
Sbjct: 97 DFMIQGGDYMKGDGTG 112
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANA 347
TG SIYG KF+DENF KHTGPG+LSM +
Sbjct: 111 TGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +3
Query: 369 QFFITTVKTSWLDGRHVVFGNVV-EGMEVVKQIE 467
QFFIT K WLD +HVVFG V+ +GM V++IE
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIE 233
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 77.8 bits (183), Expect = 8e-15
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +3
Query: 258 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
GG SI+G KF DE +LKH GV+SMAN+G +TNGSQFFIT K L+G + VF V
Sbjct: 62 GGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKV 121
Query: 435 VEGMEVVKQIE 467
+ G EV+ +E
Sbjct: 122 IHGFEVLDLME 132
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = +1
Query: 88 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
LG I E+ D P+T ENF ALC G+ Y G+IFHR I FM+QGGD T G S
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGDPTGTGKGGTS 65
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 TGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 431
+GG+SI+G F+DE N L H+G GV+SMAN+G TNGSQFFI L+ +H VFG
Sbjct: 405 SGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGM 464
Query: 432 VVEGMEVVKQIE 467
VV G+ + +E
Sbjct: 465 VVGGLTTLSAME 476
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
G + +EL D+TP+TCENF C E G+ Y G IFHR I NFM+QGGD T GES
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIKNFMIQGGDPTGTGSGGES 409
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Frame = +1
Query: 49 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 204
P VFFD+ + +I EL +DV PKT ENFRALCTGE+G G +KG+ HR
Sbjct: 8 PHVFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHR 67
Query: 205 VIPNFMLQ 228
++ FM Q
Sbjct: 68 ILKGFMAQ 75
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3
Query: 387 VKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 491
V TS + +HVVFG VV GM ++K++E GS +GK
Sbjct: 87 VSTSCVS-KHVVFGKVVTGMPLLKKLEAVGSDTGK 120
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD-TNGSQFFITTVKTSWLDGRHVVFG 428
TGG+SIYG F DE T L+ G+++ ANAG +NGSQFFI+ + WLD ++ +FG
Sbjct: 73 TGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFG 132
Query: 429 NV 434
V
Sbjct: 133 KV 134
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
G + IEL PK NF LC +G+ Y G++FHRVI +F++QGGD T GES
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGGDPTGSGTGGES 77
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 57.6 bits (133), Expect = 9e-09
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Frame = +3
Query: 264 KSIYGNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFG 428
K +YG++ F+DE L+H+ G ++MA+AG + N SQF+IT +LD +H VFG
Sbjct: 68 KFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHTVFG 127
Query: 429 NVVEGMEVVKQI-ETFGSQSGKTSKRI 506
V EG + + +I ET+ G+ K I
Sbjct: 128 MVAEGFDTLTKISETYVDDKGRPFKDI 154
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 88 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
+G I ++L +D+ P T +NF LC K Y G +FH+V +F+ Q GD T G+S
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC---KMKYYNGCLFHKVEKDFLAQTGDPTGTGAGGDS 65
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +3
Query: 285 FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK-TSWLDGRHVVFGNVVEGMEVVK 458
F+DE + L+H+ G ++MA+AG + N SQF+IT +LD +H VFG V EG + +
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTIT 167
Query: 459 QI-ETFGSQSGKTSKRI 506
+I ET+ G+ K I
Sbjct: 168 KINETYVDDKGRPFKDI 184
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 88 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 204
+G I ++L +D+ P T +NF LC G +G G F +
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRK 47
>02_01_0086 + 613113-613532
Length = 139
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/104 (30%), Positives = 48/104 (46%)
Frame = +3
Query: 156 VHWRERLRLQGLHFPSCHPQFHAARRGLHQP*RTGGKSIYGNKFEDENFTLKHTGPGVLS 335
++ ++ L +GL +P+ H R L Q + +ENF L H P
Sbjct: 18 LYTKKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRRHLPNENFLLPHDRPW--- 74
Query: 336 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 467
+ N A+ N SQFF + W DG +VVFG ++ G +K IE
Sbjct: 75 LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIE 115
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 103 IELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 231
+EL +D+ P T ENFRAL T +K YKG + P ++G
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKGLCLSQHYPRIHVEG 42
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +1
Query: 73 VDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHN 252
V D G I IE+ D + + F +LC K +KG F VI NF++QGGDF + N
Sbjct: 97 VIDTAKGSITIEIYKDASADVVDRFVSLC---KSNHFKGMPFRHVIKNFVIQGGDF-DFN 152
Query: 253 GLGE 264
G +
Sbjct: 153 GAAQ 156
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 354 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 467
+ G FITT L+ + VVFG V+ G ++V++IE
Sbjct: 186 NNKGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIE 223
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 231
+ F DV++ P G+I I L D P F +L T G GY+ F +++P ++ G
Sbjct: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVPGYVQHG 132
Query: 232 G 234
G
Sbjct: 133 G 133
Score = 34.7 bits (76), Expect = 0.076
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 348 GADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 464
G NG++F ITT LD +V G VV+GM+V+ +I
Sbjct: 202 GVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 76 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNG 255
D PLG+++ L + P T NF+A CT Y+G++ H+++ G
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACTSA---AYRGTLVHKLLQGQFFVAGRQGPRRD 179
Query: 256 LGE-SPSTAI 282
GE P T +
Sbjct: 180 RGEVQPPTGL 189
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Frame = +3
Query: 300 FTLKHTGPGVLSMANAGADTNGS----------QFFITTVKTSW--LDGRHVVFGNVVEG 443
F LKH PG LS+ D + +F +TT LDG+++VFG V+EG
Sbjct: 201 FELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDGQNIVFGTVLEG 260
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 303 TLKHTGPGVLSMA-NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 467
T+KH G+LSM ++ ++ GS F I LDG++ VFG + +G + ++++E
Sbjct: 156 TVKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLE 210
>10_01_0310 + 3425099-3425218
Length = 39
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTG 165
G +VIE +D PKT ENFR +CTG
Sbjct: 8 GSVVIEQFADKVPKTTENFRPMCTG 32
>05_01_0072 -
486211-486254,486350-486524,486658-486852,487489-487599,
487693-487905,488432-488539,488621-488762,489157-490418,
490460-490480,490842-491228
Length = 885
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 220 MLQGGDFTNHNGLGESPSTAISLKTRISP 306
++ G +F N+NG+G SP+ A SL+T I P
Sbjct: 379 LVGGSNFLNYNGIG-SPNAATSLQTAIDP 406
>12_02_1032 +
25542420-25542573,25543511-25543577,25543816-25543918,
25544435-25544505,25544639-25544702,25545260-25545316,
25545435-25545593,25545967-25546035,25546111-25546202,
25546579-25546657,25546923-25547088,25547480-25547604,
25547737-25548078,25548271-25548432,25548520-25548624,
25548766-25548860,25548948-25549044,25549848-25550165,
25550228-25550296
Length = 797
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 188 PL*PKPFSPVHRARKFSHVLGVTSLLSSITIFPSGASSTVTSKNTRGRDILP 33
PL P SP+ R+ H + + + +++ PS +SSTVTS G D P
Sbjct: 722 PLLLSPRSPMSELRRPLH-MPFSPVRKAVSPSPSSSSSTVTSPRNAGEDQKP 772
>12_02_0854 +
23697826-23698033,23699111-23699276,23699430-23699466,
23699531-23700145
Length = 341
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 527 SDHSL*YDSLRGLPRLAAKGLNLLDNFHAFNN 432
SDHS+ D+L +P L +G + L F AFN+
Sbjct: 85 SDHSVQTDALYDIPHLRLRGPSPLSLFRAFND 116
>10_08_1022 + 22337332-22339398
Length = 688
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 260 PSPLWLVKSPPCSMKLGMTRWKMEPL*PKPFSPVHRARKFSHVLGVTSLLS 108
PS LWL +PP MK ++ + P P P H+ + F + G TS L+
Sbjct: 258 PSVLWLADAPPMDMKDSISAADISVSKPPP-PPPHQIQHFEN--GSTSTLT 305
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 460 CLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAM 335
C T ++P +T PK+ L +S L V M+N + S ALA+
Sbjct: 2901 CFTAALPLSTIPKS--LNNSHFALEVTMRNGKKHASLRALAI 2940
>06_01_0719 +
5239238-5239635,5239735-5239945,5240379-5240454,
5240573-5240675,5241089-5241157,5241318-5241354,
5241445-5241519,5241598-5241649,5241752-5241796,
5241994-5242080,5242348-5242445
Length = 416
Score = 28.3 bits (60), Expect = 6.6
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +2
Query: 38 KCLYHEYSSTSLLTMPHW 91
+CL+HEY+++S + +P W
Sbjct: 396 RCLFHEYNTSSQIFLPIW 413
>03_06_0769 +
36134298-36134356,36134740-36134919,36134975-36135007,
36135008-36135128,36135227-36135266,36135811-36135863,
36135937-36135998,36136354-36136506,36136949-36137160,
36137480-36138972,36140560-36141483,36141734-36142043,
36143818-36143874,36144114-36144167,36144452-36144510
Length = 1269
Score = 28.3 bits (60), Expect = 6.6
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = -1
Query: 443 AFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSS---VLKGEILVFKLIAV 273
A + P N S I G D+ + L T+SIS G ++GEDA + + + +
Sbjct: 263 ARSEFPPFNASGIMFMG-DNMKQNLETLSISNGDANGEDAAKADQRTAQHSGAPSEYLHG 321
Query: 272 DGLSPSPLWLVKSPPCSMKLGMTRWK-MEPL*PKPFSPVHRAR 147
S P W + PP M+ GM + + P P P+ P+ R
Sbjct: 322 PYQSAYPPWAI-HPPYPMQ-GMPYYPGVNPYYPPPYPPMDDPR 362
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 362 ISISTGISHGEDARSSVLKGEILVF 288
++I T I HG D R+S L GE LVF
Sbjct: 119 LAILTAIFHGVDPRTSFLIGEGLVF 143
>02_05_1351 - 35855543-35856751
Length = 402
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 282 YCRRWTFPQSVMVGEVPSLQHEIGDD 205
Y R W FP S +V V SL H G D
Sbjct: 139 YLRSWVFPSSNLVDLVRSLSHLFGLD 164
>01_06_1312 -
36205549-36206649,36207558-36207883,36209083-36209198,
36210472-36211577
Length = 882
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 428 PKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKGEILVFKLIAVDGLSPSPL 249
P DN S I+P DS + G+ +IS G R + + E + +S L
Sbjct: 57 PDDNPSDIRPPSRDSDGDHSGSATISPASRSGRGRRVTTVYNEGSNRIRARIILISVPFL 116
Query: 248 WLVKSPP 228
+LV SPP
Sbjct: 117 FLVCSPP 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,914,113
Number of Sequences: 37544
Number of extensions: 479352
Number of successful extensions: 1251
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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