Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00035
(728 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 144 5e-35
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 144 5e-35
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 142 2e-34
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 138 3e-33
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 136 1e-32
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 136 1e-32
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 133 1e-31
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 130 1e-30
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 129 2e-30
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 127 7e-30
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 111 6e-25
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 111 6e-25
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 109 2e-24
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 104 5e-23
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 101 4e-22
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 100 1e-21
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 100 2e-21
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 88 5e-18
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 85 3e-17
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 79 4e-15
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 72 3e-13
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 64 1e-10
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 54 1e-07
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 49 4e-06
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 41 0.001
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 39 0.004
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 34 0.084
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 34 0.084
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 34 0.084
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 33 0.26
At1g50520.1 68414.m05667 cytochrome P450 family protein similar ... 29 4.2
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 7.3
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 28 7.3
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 7.3
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.6
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.6
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 9.6
At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa... 27 9.6
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 27 9.6
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 9.6
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 144 bits (349), Expect = 5e-35
Identities = 70/112 (62%), Positives = 80/112 (71%)
Frame = +3
Query: 174 LRLQGLHFPSCHPQFHAARRGLHQP*RTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 353
L +G F P F TGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 354 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIV 509
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS SGK +K +V
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVV 164
Score = 109 bits (261), Expect = 2e-24
Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 7/81 (8%)
Frame = +1
Query: 40 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 198
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 199 HRVIPNFMLQGGDFTNHNGLG 261
HRVIPNFM QGGDFT NG G
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTG 81
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 144 bits (349), Expect = 5e-35
Identities = 70/112 (62%), Positives = 80/112 (71%)
Frame = +3
Query: 174 LRLQGLHFPSCHPQFHAARRGLHQP*RTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 353
L +G F P F + TGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 354 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIV 509
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS SGK +K +V
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVV 165
Score = 111 bits (266), Expect = 6e-25
Identities = 54/80 (67%), Positives = 60/80 (75%), Gaps = 7/80 (8%)
Frame = +1
Query: 43 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 201
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 202 RVIPNFMLQGGDFTNHNGLG 261
RVIPNFM QGGDFT NG G
Sbjct: 63 RVIPNFMCQGGDFTKGNGTG 82
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 142 bits (345), Expect = 2e-34
Identities = 69/112 (61%), Positives = 81/112 (72%)
Frame = +3
Query: 174 LRLQGLHFPSCHPQFHAARRGLHQP*RTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 353
L +G F P+F TGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 354 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIV 509
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE GS SG+TSK +V
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVV 165
Score = 100 bits (239), Expect = 1e-21
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 7/78 (8%)
Frame = +1
Query: 49 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 207
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 208 IPNFMLQGGDFTNHNGLG 261
IP FM QGGDFT NG G
Sbjct: 65 IPKFMCQGGDFTAGNGTG 82
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 138 bits (334), Expect = 3e-33
Identities = 63/84 (75%), Positives = 70/84 (83%)
Frame = +3
Query: 258 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 437
GG+SIYG KF DENF LKHTGPGVLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG VV
Sbjct: 109 GGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVV 168
Query: 438 EGMEVVKQIETFGSQSGKTSKRIV 509
+GM+VV +IE G QSG ++V
Sbjct: 169 QGMDVVYKIEAEGKQSGTPKSKVV 192
Score = 96.7 bits (230), Expect = 1e-20
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 7/77 (9%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 210
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 211 PNFMLQGGDFTNHNGLG 261
P+FM+QGGDFT+ NG+G
Sbjct: 93 PSFMIQGGDFTHGNGMG 109
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 136 bits (329), Expect = 1e-32
Identities = 62/84 (73%), Positives = 69/84 (82%)
Frame = +3
Query: 258 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 437
GG+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV TSWLDGRHVVFG VV
Sbjct: 112 GGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVV 171
Query: 438 EGMEVVKQIETFGSQSGKTSKRIV 509
GM+VV ++E G+QSG ++V
Sbjct: 172 TGMDVVYKVEAEGNQSGTPKSKVV 195
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 7/77 (9%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 210
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 211 PNFMLQGGDFTNHNGLG 261
P+FMLQGGDFT+ NG+G
Sbjct: 96 PSFMLQGGDFTHGNGMG 112
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 136 bits (329), Expect = 1e-32
Identities = 61/85 (71%), Positives = 71/85 (83%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG V
Sbjct: 80 TGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKV 139
Query: 435 VEGMEVVKQIETFGSQSGKTSKRIV 509
V+G VVK +E GS G S+R+V
Sbjct: 140 VDGYNVVKAMEDVGSDMGNPSERVV 164
Score = 99 bits (238), Expect = 1e-21
Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
Frame = +1
Query: 40 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 198
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 199 HRVIPNFMLQGGDFTNHNGLG 261
HR+IP FM QGGDFT NG G
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTG 81
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 133 bits (322), Expect = 1e-31
Identities = 61/82 (74%), Positives = 70/82 (85%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG+SIYG KF+DENF KHTG G+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG V
Sbjct: 80 TGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQV 139
Query: 435 VEGMEVVKQIETFGSQSGKTSK 500
V+G++VVK IE GS SGKTSK
Sbjct: 140 VKGLDVVKAIEKVGSDSGKTSK 161
Score = 106 bits (255), Expect = 1e-23
Identities = 51/81 (62%), Positives = 59/81 (72%), Gaps = 7/81 (8%)
Frame = +1
Query: 40 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 198
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 199 HRVIPNFMLQGGDFTNHNGLG 261
HRVIP FM QGGDFT NG G
Sbjct: 61 HRVIPGFMCQGGDFTAKNGTG 81
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 130 bits (313), Expect = 1e-30
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = +3
Query: 258 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 437
GG+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV TSWLDG HVVFG V+
Sbjct: 136 GGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVL 195
Query: 438 EGMEVVKQIETFGSQSGKTSKRIV 509
GMEVV++IE G SG ++
Sbjct: 196 SGMEVVRKIEAQGQDSGVPKANVI 219
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 7/77 (9%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 210
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 211 PNFMLQGGDFTNHNGLG 261
P FM+QGGDFT +G G
Sbjct: 120 PGFMIQGGDFTRGDGRG 136
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 129 bits (312), Expect = 2e-30
Identities = 60/86 (69%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTSWLDGRHVVFG V
Sbjct: 162 TGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQV 221
Query: 435 VEGMEVVKQIETFGSQSG-KTSKRIV 509
+EGMEVVK IE + G + K++V
Sbjct: 222 IEGMEVVKLIEEQETDRGDRPRKKVV 247
Score = 95.9 bits (228), Expect = 2e-20
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 4/74 (5%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 219
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 220 MLQGGDFTNHNGLG 261
M+QGGDF NG G
Sbjct: 150 MIQGGDFEKGNGTG 163
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 127 bits (307), Expect = 7e-30
Identities = 56/72 (77%), Positives = 65/72 (90%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD +HVVFG V
Sbjct: 164 TGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQV 223
Query: 435 VEGMEVVKQIET 470
+EGM++V+ +E+
Sbjct: 224 IEGMKLVRTLES 235
Score = 98.3 bits (234), Expect = 5e-21
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 231
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +FM+QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 232 GDFTNHNGLG 261
GDFT NG G
Sbjct: 156 GDFTEGNGTG 165
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 111 bits (266), Expect = 6e-25
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG V
Sbjct: 84 TGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKV 143
Query: 435 VEGMEVVKQIETFGSQSGKTSKRI 506
VEGM V+K++E G+ GK + +
Sbjct: 144 VEGMAVIKKMELVGTSDGKPTSPV 167
Score = 94.7 bits (225), Expect = 6e-20
Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Frame = +1
Query: 37 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 192
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 193 IFHRVIPNFMLQGGDFTNHNGLG 261
FHRVI FM QGGDF+N NG G
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTG 85
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 111 bits (266), Expect = 6e-25
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG V
Sbjct: 84 TGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKV 143
Query: 435 VEGMEVVKQIETFGSQSGKTSKRI 506
VEGM V+K++E G+ GK + +
Sbjct: 144 VEGMAVIKKMELVGTSDGKPTSPV 167
Score = 94.7 bits (225), Expect = 6e-20
Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Frame = +1
Query: 37 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 192
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 193 IFHRVIPNFMLQGGDFTNHNGLG 261
FHRVI FM QGGDF+N NG G
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTG 85
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 109 bits (261), Expect = 2e-24
Identities = 50/71 (70%), Positives = 59/71 (83%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG+SIYG KF+DENF LKH G+LSMAN+G +TNGSQFFITT +TS LDG+HVVFG V
Sbjct: 81 TGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRV 140
Query: 435 VEGMEVVKQIE 467
+GM VV+ IE
Sbjct: 141 TKGMGVVRSIE 151
Score = 84.2 bits (199), Expect = 8e-17
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Frame = +1
Query: 40 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 195
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 196 FHRVIPNFMLQGGDFTNHNGLG 261
FHRVI FM+QGGD + ++G G
Sbjct: 61 FHRVIKGFMIQGGDISANDGTG 82
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 104 bits (250), Expect = 5e-23
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K WLD +HVVFG V
Sbjct: 106 SGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRV 165
Query: 435 V-EGMEVVKQIE 467
+ +G+ V+++IE
Sbjct: 166 LGDGLLVMRKIE 177
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Frame = +1
Query: 49 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 213
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 214 NFMLQGGDFTNHNGLG 261
+FM+Q GDF ++G G
Sbjct: 92 DFMVQSGDFLKNDGSG 107
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 101 bits (243), Expect = 4e-22
Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 SIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 446
SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTVK SWL+G HVV G V++GM
Sbjct: 127 SIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGM 186
Query: 447 EVVKQIE-TFGSQSGKTSKRIV 509
+ V IE G+ SGK K++V
Sbjct: 187 DNVFAIEGGAGTYSGKPRKKVV 208
Score = 81.0 bits (191), Expect = 7e-16
Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 210
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 211 PNFMLQGGDFTNHNG 255
F++QGGD + +G
Sbjct: 108 SGFVIQGGDIIHGDG 122
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 100 bits (239), Expect = 1e-21
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Frame = +3
Query: 258 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG V
Sbjct: 71 GGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRV 130
Query: 435 VEGMEVVKQIETFGSQSGKTSKRIVSKTVVR 527
GMEV+K++ + Q+ T + I ++R
Sbjct: 131 CRGMEVIKRLGSV--QTDNTDRPIHEVKILR 159
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +1
Query: 64 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFT 243
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F++QGGD T
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPT 66
Query: 244 NHNGLGES 267
GES
Sbjct: 67 GTGRGGES 74
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 99.5 bits (237), Expect = 2e-21
Identities = 47/72 (65%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 TGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 431
TGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VFG
Sbjct: 536 TGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGR 595
Query: 432 VVEGMEVVKQIE 467
VV+GM+VV+ IE
Sbjct: 596 VVKGMDVVQGIE 607
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/75 (37%), Positives = 39/75 (52%)
Frame = +1
Query: 13 IAYIANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGS 192
++ I N+ SLP + + LG I ++L + PKT ENF C G+ Y
Sbjct: 463 VSDIGNSATTSLP----ENVIMHTTLGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNH 515
Query: 193 IFHRVIPNFMLQGGD 237
+FHRVI FM+Q GD
Sbjct: 516 LFHRVIRGFMIQTGD 530
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 7/78 (8%)
Frame = +1
Query: 40 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 198
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 199 HRVIPNFMLQGGDFTNHN 252
++P+ M GGD N
Sbjct: 61 DHIVPDLMWCGGDIIFEN 78
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +3
Query: 270 IYGNKFEDENFTLKHT-GPGVLSMANAGADTNGSQFFITTVKTSW-LDGRHVVFGNVVEG 443
I+ + +DE F L H GPG++SMA D+NGSQF I +DG HVV G VVEG
Sbjct: 81 IHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEG 136
Query: 444 MEVVKQIETFGSQSGKTSKRIVSKTVV 524
+++++ IE + T+ R SK VV
Sbjct: 137 LDLMRNIE---KEVITTTTRTPSKPVV 160
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 85.4 bits (202), Expect = 3e-17
Identities = 45/86 (52%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +1
Query: 37 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 192
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 193 IFHRVIPNFMLQGGDFTNHNG-LGES 267
FHR++ Q GDF N NG GES
Sbjct: 63 FFHRIMKGSSAQAGDFVNRNGTAGES 88
Score = 74.1 bits (174), Expect = 8e-14
Identities = 39/91 (42%), Positives = 55/91 (60%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
T G+SIY KF DE+ L+H G+LSM+ A D GS F IT LD +VVFG +
Sbjct: 84 TAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKL 143
Query: 435 VEGMEVVKQIETFGSQSGKTSKRIVSKTVVR 527
++G E++K+IE G + GK + VS ++R
Sbjct: 144 IQGKEILKKIERVGDEEGKPT---VSVKIIR 171
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 258 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG V
Sbjct: 62 GGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKV 121
Query: 435 VEGMEVVKQIE 467
+ G EV+ +E
Sbjct: 122 IHGFEVLDIME 132
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +1
Query: 88 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 237
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM+QGGD
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD 55
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 72.1 bits (169), Expect = 3e-13
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +3
Query: 258 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
GG+SI+G F+DE N L H+G GV+SMAN+G TNGSQFF+ + L+ +H VFG V
Sbjct: 405 GGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGV 464
Query: 435 VEGMEVVKQIE 467
V G+ + +E
Sbjct: 465 VGGLATLAAME 475
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NFM+QGGD T GES
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTGTGKGGES 408
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 255 TGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVVFG 428
TGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T K WLD +H +FG
Sbjct: 73 TGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFG 132
Query: 429 NV 434
V
Sbjct: 133 KV 134
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
G I +EL PK+ NF LC +G+ + +IFHRVIP F++QGGD T G+S
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTGSGTGGDS 77
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Frame = +3
Query: 264 KSIYGNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFG 428
K +YG + ++DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG
Sbjct: 68 KFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFG 127
Query: 429 NVVEGMEVVKQI-ETFGSQSGKTSKRI 506
+ EG + + +I E + + K I
Sbjct: 128 QIAEGFDTLTRINEAYVDPKNRPYKNI 154
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +1
Query: 88 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
LG IVI+L SD P TC+NF LC K Y G +FH V +F Q GD T G+S
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTGTGAGGDS 65
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 52 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 231
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++ G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152
Query: 232 G 234
G
Sbjct: 153 G 153
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 360 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 497
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 79 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 237
D G + IEL D P + F C + G+ +KG +F RV+ +F++Q GD
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGD 132
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 303 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 467
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +1
Query: 76 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNG 255
D PLG++V+ L P T F+ +CT YK + H++ P G G
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFPGQYFLAG----RQG 135
Query: 256 LGESPSTAISLKTRISPLSTLDLASSPWLMP 348
G + + R P +T + S +L+P
Sbjct: 136 GGRRDTAEVGYSLRDLPRNTDVVNSKAFLLP 166
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 354 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 470
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 234
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 369 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 467
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 234
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 369 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 467
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 234
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 369 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 467
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/80 (33%), Positives = 39/80 (48%)
Frame = -2
Query: 526 LTTVFDTILLEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAP 347
+T VF IL F ++ T PS++ P TC ++E+ V+ P VS+P
Sbjct: 5 ITGVFILILTITFSS---SSAVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSP 56
Query: 346 ALAMERTPGPVCLRVKFSSS 287
M TP P+C V F+SS
Sbjct: 57 PNNMSETPDPICCSV-FTSS 75
>At1g50520.1 68414.m05667 cytochrome P450 family protein similar to
CYTOCHROME P450 93A3 GB:O81973 from [Glycine max]
Length = 533
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +1
Query: 148 RALCTGEK-GFGYKGSIFHRVIPNF-MLQGGDFTNHNGLGESPST-AISLK----TRISP 306
R C GEK G+ + G ++ F + GD N GE T A LK TR++P
Sbjct: 454 RRACPGEKLGYLFTGVAIGTMVQCFDWIIDGDKVNVEEAGEMTLTMAHPLKCTPVTRVNP 513
Query: 307 LSTLDLASSPWLM 345
L++ + WLM
Sbjct: 514 LASFESEDPKWLM 526
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 179 VTRAPFSIVSSPISCCKEGTSPTITDWG 262
VT +PF V+ P+ C EGT P G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 434 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG--EILVFKLIAVDGLS 261
N+ D+ S+ + S D+E+G + S G G+D V K +++ + V G
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCKKVVQLIHGNISVVPGSD 602
Query: 260 PSP 252
SP
Sbjct: 603 GSP 605
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 23 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 148
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 382 VMKNWEPLVSAPALAMERTPGPVCLR 305
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 382 VMKNWEPLVSAPALAMERTPGPVCLR 305
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -2
Query: 427 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 260
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 997
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 178 GYKGSIFHRVIPNFMLQGGDF-TNHNGLGESPSTAISLKTRISPLSTLDLASSPW 339
G S+F + ++Q F T G G + S++ SL T ISP + A +P+
Sbjct: 545 GQSSSVFGQNTNPALVQSNTFSTPSTGFGNTFSSSSSLTTSISPFGQITPAVTPF 599
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 288 EDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVK 458
E+E KH+ L + A +G DTNG FF KT+ +VF N + EVV+
Sbjct: 536 EEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLS--EVVE 593
Query: 459 QIETFGSQ 482
+++ Q
Sbjct: 594 KLQRADEQ 601
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 382 VMKNWEPLVSAPALAMERTPGPVCLR 305
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,858,834
Number of Sequences: 28952
Number of extensions: 382922
Number of successful extensions: 1063
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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