Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00033
(348 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.001
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 32 0.022
SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyc... 32 0.022
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 32 0.029
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 32 0.029
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 31 0.051
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 30 0.12
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 29 0.16
SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein homolog|Schizos... 29 0.16
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 0.16
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 29 0.21
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 0.36
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 0.36
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 28 0.36
SPAC25B8.18 |||mitochondrial electron carrier |Schizosaccharomyc... 28 0.48
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 0.63
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 27 0.83
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 27 1.1
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 1.1
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 26 1.5
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 26 1.5
SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Ma... 26 1.5
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 1.5
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 26 1.9
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 2.5
SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces pom... 25 2.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 2.5
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 3.4
SPCC338.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 25 3.4
SPAC1782.03 |||microfibrillar-associated protein family protein|... 25 3.4
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 25 3.4
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 3.4
SPBC1711.04 |||methylenetetrahydrofolate reductase |Schizosaccha... 25 4.4
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 25 4.4
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 25 4.4
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 25 4.4
SPBC1105.05 |exg1||glucan 1,3-beta-glucosidase I/II precursor|Sc... 25 4.4
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 25 4.4
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 25 4.4
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 25 4.4
SPCC1393.04 |fta4|sma6|Sim4 and Mal2 associated |Schizosaccharom... 24 5.9
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 24 5.9
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 24 5.9
SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe... 24 5.9
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 24 5.9
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 24 7.8
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 24 7.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 24 7.8
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 24 7.8
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 36.3 bits (80), Expect = 0.001
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 94 KEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVD 222
+E+ NK+L+ +NE +Q EI++LKD+ Q++ SS+ +
Sbjct: 1437 QELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAE 1479
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 32.3 bits (70), Expect = 0.022
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 73 KESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSN 216
KE+ K + QL KQL + + QH++ LKD + M N
Sbjct: 131 KETVASEKRVNQLKKQLVDAETLLSSTQHQLTELKDVMHSMSDSHEQN 178
>SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 240
Score = 32.3 bits (70), Expect = 0.022
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 28 RDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSET-KNKNELLQHEIDALKDALRQMKHD 204
RDN L + ++ E++++EI NK++ T + K + Q E+ + A R ++
Sbjct: 122 RDNVSLTQIKTYLEMESHEEKIQEIVSRNKEIEATEERKRRIKQLELQKKEAARRAAQNL 181
Query: 205 PSSN 216
PS++
Sbjct: 182 PSAD 185
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.9 bits (69), Expect = 0.029
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +1
Query: 61 ETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVASLID 240
E ++ + +E+ +L ++++ KNELL+ + L+D ++ ++ S+ + S
Sbjct: 1498 EEEMERKKVMQQEVLRLRSRIAKELQKNELLRKQNQVLQDQVKALQETVVSSEEAESASV 1557
Query: 241 HAEIK 255
HA+ K
Sbjct: 1558 HADTK 1562
Score = 30.3 bits (65), Expect = 0.089
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAETTLKESE----KQVKEIEQLNKQLSETKNKNELLQHEID 168
E+L D + L++ A +TL++ K ++++E LNK+++ NE I
Sbjct: 1053 EDLRKTREDYEKELLRHADARSTLQKLREDYTKALEQVEDLNKEIALKAGINESQPFPIS 1112
Query: 169 ALKDALRQ 192
+D LRQ
Sbjct: 1113 EKEDPLRQ 1120
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 31.9 bits (69), Expect = 0.029
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 61 ETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMK 198
E LK E QV+ + N+Q++ET K + L ++ D ++Q+K
Sbjct: 288 EKQLKHEESQVELLRTHNRQMTETLEKYKSLDFNMEKEGDVIQQLK 333
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 31.1 bits (67), Expect = 0.051
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 73 KESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
K +E + ++++L +LSE K+K E E+ LK ++RQ D
Sbjct: 44 KVAETENVDVKELQSKLSELKSKYEAKDKEVAELKGSIRQSLAD 87
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 29.9 bits (64), Expect = 0.12
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 4 ELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEI 165
+L + RD+ + + + + ++ E EK V E EQL++ L+ +K L+ E+
Sbjct: 346 QLQLLKEKRDSLKYQVENQDISISEFEKMVSEREQLDRNLNMIGSKISELRKEV 399
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 29.5 bits (63), Expect = 0.16
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Frame = +1
Query: 1 EELITVSR---DRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSET----KNKNELLQH 159
++ +T+++ +RD F+ + + E T+K+ ++++ + LN L E+ + +N L
Sbjct: 761 DQTVTINKFAFERDQFRERSMGFENTIKDLTRKMEATDMLNVSLHESLRSVQTENSELVT 820
Query: 160 EIDALKDAL--RQMKHDPSSNVDVASLIDH 243
E+ LK L +Q D ++N+ DH
Sbjct: 821 EMALLKAELVKKQAIIDANANIYDKLTADH 850
>SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 196
Score = 29.5 bits (63), Expect = 0.16
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 70 LKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVD--VASLIDH 243
+ E EK+ E NK+ + +K E L+H+ D++ + +++ D ++D +S+
Sbjct: 82 ISELEKEKLERPLSNKKKEKNDHKAESLKHDYDSVGE--KRISKDSVKHLDKTYSSIDSK 139
Query: 244 AEIKPNYPK 270
+ K N+PK
Sbjct: 140 KDFKYNFPK 148
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 29.5 bits (63), Expect = 0.16
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +1
Query: 40 QLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALR 189
QLK SA+ + + EK +E++ N +L++ + + +HE++ + + R
Sbjct: 506 QLKASSAQEAIDKKEKMEREMKNKNLELADMILERDRARHELETMHRSQR 555
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 29.1 bits (62), Expect = 0.21
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 16 VSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQM 195
++R+ D Q + +LK + + + L ++L + L +E+DALK L M
Sbjct: 447 LNREIDILQNHVEKLKMSLKNTNSDITGEDVLQQKLKQLAKDRGNLLNELDALKSKLAYM 506
Query: 196 KH---DPSSNVD 222
+ DP+ N D
Sbjct: 507 EFTYTDPTPNFD 518
Score = 25.8 bits (54), Expect = 1.9
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 31 DNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDAL 174
++ QLK + ++ E Q+K+++ N + + +L QHE+ L
Sbjct: 683 NSLQLKLQVVTSEYEKLETQLKDLKTQNANFHRLEQEIQLKQHELTLL 730
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 28.3 bits (60), Expect = 0.36
Identities = 14/80 (17%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 LITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQ--LNKQLSETKNKNELLQHEIDALKD 180
++ D + L+Y + +E E++V E+E+ L K L E+ E +++ +
Sbjct: 439 MLLADADSEMMNLEYEIRQQMTREMEERVSEVERTFLTKLLEESAQGIEYTDQKLEKMGG 498
Query: 181 ALRQMKHDPSSNVDVASLID 240
+++++ + S + + ++
Sbjct: 499 WMKKLQDENSEKTETIAQLE 518
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 0.36
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 70 LKESEKQVKEIEQLNKQLSETKNKNELLQHEIDAL 174
L E++ EIE L+K+LSETK + LQ ++ L
Sbjct: 721 LSEAKPIFDEIELLDKRLSETKTELSDLQGDLQGL 755
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 28.3 bits (60), Expect = 0.36
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKD 180
E L V +R+N E ++E L + LSE + K L+H +L++
Sbjct: 275 EILKNVLNERENEVTDKKGKGKQKAEESTLTSDLENLREMLSELEQKTLDLKHGAPSLEE 334
Query: 181 ALRQMKHDPS 210
A+ H+ S
Sbjct: 335 AVMSKMHESS 344
>SPAC25B8.18 |||mitochondrial electron carrier |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 121
Score = 27.9 bits (59), Expect = 0.48
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 82 EKQVKEIEQLNKQLSET-KNKNELLQHEIDALKDALRQMKHD 204
E ++QLN LS K+K++LL +++DAL + +HD
Sbjct: 47 ETATPTLDQLNIMLSNIGKDKSDLLVAGATSIEDALTKYQHD 88
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.5 bits (58), Expect = 0.63
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 61 ETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
E L+ +++++ IE SETK +NE LQ E +LK +++ +
Sbjct: 879 EEILRRTQERLANIED---SFSETKQQNENLQRESASLKQINNELESE 923
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 27.1 bits (57), Expect = 0.83
Identities = 10/46 (21%), Positives = 28/46 (60%)
Frame = +1
Query: 19 SRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQ 156
+++++ +L+ ++ ETT+ ++ V + +LN+ +S K+ L +
Sbjct: 42 TKEKNQNKLEILNNETTIGSTKSSVSSLPELNRNVSFEKSDQNLAE 87
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 26.6 bits (56), Expect = 1.1
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +1
Query: 61 ETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ---MKHDPSSNVD--- 222
ETT+K++ K K LNK + ET + I L L + DP SN
Sbjct: 19 ETTVKDTLKNKKLSSSLNKVIEETNVGSSGCDRTIGNLLFTLANASLKQKDPKSNAHEAF 78
Query: 223 VASLIDHAEIKPN 261
+AS I ++K N
Sbjct: 79 IASKIVSGDLKTN 91
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 1.1
Identities = 12/52 (23%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +1
Query: 61 ETTLKESEKQV----KEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
E T++E+E+ + +E+E+L ++++ + HE D L+ L+ ++ +
Sbjct: 584 EKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEE 635
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 1.5
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAE--TTLKES-EKQVKEIE----QLNKQLSETKNKNELLQH 159
E+L+ ++ L+ +S E TTLK E + K++E LNK L KN ELL
Sbjct: 230 EQLLDYNKQSIQLGLRPLSEEVVTTLKNLLEVKDKDVEGRNEALNKILHPAKNLVELLTE 289
Query: 160 EIDALKDALRQMKHDP 207
+ + + ++ + DP
Sbjct: 290 KENLINESTLESPSDP 305
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 26.2 bits (55), Expect = 1.5
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +1
Query: 13 TVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
T+ +++ Q + E L+ K++ E+E L L++ KNK L E+ L+ L
Sbjct: 174 TLMKEKTKVQGQRDLLEQRLQGLMKKLTEVESLTVSLNDEKNK---LTLELTNLRICL-- 228
Query: 193 MKHDPSSNVDVASLIDHAEIKPN 261
H+ N + ID +E N
Sbjct: 229 --HELQLNAEKGETIDESEDSKN 249
>SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 26.2 bits (55), Expect = 1.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 100 IEQLNKQLSETKNKNELLQHEIDALKDALR 189
+E L K+L ETK + EI LKD L+
Sbjct: 294 VEPLKKELQETKTLLAQKEEEISNLKDKLQ 323
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 1.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 55 SAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSS 213
S ET +E++K +K++ S +Q E+D+ + Q+K + +S
Sbjct: 405 SCETIREENQKNIKKLNDAESLKSRLLQSRTQMQTELDSYITSNSQLKDEITS 457
Score = 25.8 bits (54), Expect = 1.9
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 58 AETTLKE-SEKQVKEIEQLNKQLSETKNKNELLQHEID 168
AE+TLKE SEK + E L ++ + LQ+EID
Sbjct: 356 AESTLKENSEKFKQNSESLKSRVDNLNDYITKLQNEID 393
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 25.8 bits (54), Expect = 1.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 279 ERNNLANKYEVEQKERVRLDQEL 347
E N L N EVE + +RLD+E+
Sbjct: 453 ELNELKNNLEVESSKVLRLDEEM 475
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.4 bits (53), Expect = 2.5
Identities = 12/57 (21%), Positives = 29/57 (50%)
Frame = +1
Query: 46 KYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSN 216
+Y S + +E Q++E+E+ KQL + ++ + E + L + ++ + +N
Sbjct: 42 EYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETN 98
>SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 910
Score = 25.4 bits (53), Expect = 2.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 130 TKNKNELLQHE---IDALKDALRQMKHDPSSNVDVASLIDHAEIKPNYPKL 273
TKN ELL+ ++ +KD L Q K +V +A++ DH + + KL
Sbjct: 530 TKNAKELLESGLTGVEDIKDVLIQKKEYYLLSVLLATVRDHDGVLQTWKKL 580
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 2.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 94 KEIEQLNKQLSETKNKNELLQHEIDALK 177
KE+E + K NE L+ EIDAL+
Sbjct: 685 KEVEDQKDVILSQKRTNETLKTEIDALQ 712
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 3.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 28 RDNFQLKYVSAETTLKES---EKQVKEIEQLN----KQLSETKNKNELLQHEIDALK 177
+ N + + S T+ +E EKQVK + LN K++ E K + L ++ + LK
Sbjct: 129 KKNVETEVTSRSTSSQEKDELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLK 185
>SPCC338.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 141
Score = 25.0 bits (52), Expect = 3.4
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 116 LFNCSISLTCFSDSFNVVSADTYFSWKLSRS 24
+F SI TC+ SF+++ ++ + + ++SRS
Sbjct: 109 IFCTSILFTCYIQSFSLLISNFFIAIEVSRS 139
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 25.0 bits (52), Expect = 3.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 79 SEKQVKEIEQLNKQLSETKNKNELLQHEID 168
S+K ++E + L ETKN NELL ++ID
Sbjct: 155 SQKILEETIKRELLLKETKNNNELL-NDID 183
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 25.0 bits (52), Expect = 3.4
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +1
Query: 61 ETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVD 222
++ + E KQ+ E E+ +++S+ +K + L E+D K+ + + + +N++
Sbjct: 189 DSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYNNLN 242
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.0 bits (52), Expect = 3.4
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +1
Query: 55 SAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
S +T+ E+Q + E+ +++L + + K L+ E+D K +QM+ +
Sbjct: 639 SLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEEE 688
>SPBC1711.04 |||methylenetetrahydrofolate reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 320
Score = 24.6 bits (51), Expect = 4.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 112 NKQLSETKNKNELLQHEIDALKDALRQMKHDPSSN 216
NK +E + EL + D L+DA+ + +DPS N
Sbjct: 61 NKTCTEIGFQYELREVPKDDLEDAIVEANNDPSVN 95
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 24.6 bits (51), Expect = 4.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 206 PHRTSMWPHLSTTLKSSPTIQSFSRK 283
PH S H T KS P Q FSR+
Sbjct: 80 PHPNSRQKHQHQTSKSVPRSQRFSRE 105
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 24.6 bits (51), Expect = 4.4
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +1
Query: 25 DRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
DR+ + E L +E++ K +E + + L + +KN + E+D ++ L ++ +
Sbjct: 338 DREYIPNELTCVEAVLDINEQERKHLEAMMEDLLDDPDKNAV---ELDTIQTRLTDLETE 394
Query: 205 PSSN 216
S +
Sbjct: 395 NSDH 398
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 24.6 bits (51), Expect = 4.4
Identities = 8/34 (23%), Positives = 22/34 (64%)
Frame = +1
Query: 97 EIEQLNKQLSETKNKNELLQHEIDALKDALRQMK 198
+I + +++E K + +++ +ID++K + +MK
Sbjct: 202 DIASIKGEMAEMKGEMTIMKSDIDSVKGEMAEMK 235
>SPBC1105.05 |exg1||glucan 1,3-beta-glucosidase I/II
precursor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 24.6 bits (51), Expect = 4.4
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Frame = +1
Query: 13 TVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDA------L 174
TV+R D + YV+ + T + V IE +N+ L + ++L Q+++DA L
Sbjct: 181 TVTRTLDI--ITYVANKYTQSQYASVVIGIETVNEPLGYGLDMDQLKQYDLDAYNIVNPL 238
Query: 175 KDALRQMKHDPSSNVDVASLIDHAEIKPN 261
++ + HD + VD+ S+ D+ + P+
Sbjct: 239 SSSVATIIHD--AYVDL-SIWDYGVVSPS 264
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 24.6 bits (51), Expect = 4.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAETTLKESEKQV--KEIEQLNKQL-SETKNK 141
+E I DR+N +L ++ L ESE +V K ++L K L +E K+K
Sbjct: 676 KEKIKKKFDRENEKLAAEDPKSVLPESELEVRLKAADELKKALDAELKSK 725
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 24.6 bits (51), Expect = 4.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 82 EKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVASLIDHAEIKPN 261
+K+VK I + K S + N + E L +L + HDPS + ++DH
Sbjct: 242 DKEVKTIYRKIKANSYSFPSNVDISAEAKDLISSL--LTHDPSIRPSIDDIVDHEFFHTG 299
Query: 262 Y 264
Y
Sbjct: 300 Y 300
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 24.6 bits (51), Expect = 4.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 118 QLSETKNKNELLQHEIDALKDA-LRQMKHDPSSNVDVASLIDHAEIKPN 261
+L KN+L++ E+D+LK+ L K S+N + H +I N
Sbjct: 502 ELEALNRKNDLIRGELDSLKEKNLVAQKQLKSANNTLHVRAKHIQILEN 550
>SPCC1393.04 |fta4|sma6|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 233
Score = 24.2 bits (50), Expect = 5.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 64 TTLKESEKQVKEIEQLNKQL 123
TTL E E++ E+EQ+ K L
Sbjct: 142 TTLSELEQERSELEQIEKML 161
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 24.2 bits (50), Expect = 5.9
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 43 LKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALK 177
+K ++++ +S+ +K+ L +L +NELLQ + L+
Sbjct: 512 VKAMNSQPDDPDSDYAIKQNNALQNRLEALTRENELLQSRVTTLE 556
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 24.2 bits (50), Expect = 5.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 7 LITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQL 111
L+++ R D F ++ S + + +Q+KEIE++
Sbjct: 186 LVSIHRQIDGFAVRPTSDPGFIDRTMEQLKEIEEM 220
>SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 551
Score = 24.2 bits (50), Expect = 5.9
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +1
Query: 67 TLKESEKQVKEIEQLNKQL---SETKNKNELLQHEIDALKDALRQMKHDPS----SNVDV 225
T + S +Q K +++ + L S + K+ LL E KD++ ++K +PS S +
Sbjct: 472 TPEVSTRQTKNVDEEDSALLMASPSVRKSNLLPQEDLISKDSVIKLKENPSVIPHSEPES 531
Query: 226 ASLIDHAEIKPNYPK 270
+S + + + K N K
Sbjct: 532 SSKVINCQAKLNVEK 546
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 24.2 bits (50), Expect = 5.9
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 64 TTLKES-EKQVKEIEQLNKQLSETKNKNEL 150
T LKE +K KE+E++ QL+ ++KN +
Sbjct: 225 TALKEKIDKLNKELEKVEPQLTFLRSKNSI 254
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 23.8 bits (49), Expect = 7.8
Identities = 13/65 (20%), Positives = 30/65 (46%)
Frame = +1
Query: 52 VSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVAS 231
+S + L EK++ E+++ ++ K +Q ++D +ALR K +
Sbjct: 1 MSDQDALDTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRNDKESIDAQSVYVG 60
Query: 232 LIDHA 246
+D++
Sbjct: 61 NVDYS 65
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 23.8 bits (49), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 103 EQLNKQLSETKNKNELLQHEIDALKDALRQ 192
EQL KQLS + K E QH + +A +Q
Sbjct: 334 EQLLKQLSNAQEKLEHEQHSRNQKLEAAKQ 363
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 23.8 bits (49), Expect = 7.8
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +1
Query: 13 TVSRDRDNFQLKYVSAETTLKESEKQVKEIEQ----LNKQLSETKNKNELLQHE 162
+V + ++N Q + S +T+ K+ + +E+E + KQL +T +K + LQ E
Sbjct: 593 SVMQLKENEQ-NFSSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLE 645
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 23.8 bits (49), Expect = 7.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 70 LKESEKQVKEIEQLNKQLSETKNKNELLQ-HEIDALKDALRQMKHDPSSNV-DVASLIDH 243
++++ +E+ N + ETKN+N + E K Q H P++ V SL +
Sbjct: 91 IRQNISTTLNLEKTNDSIKETKNENFRMDVLETYKCKQLNHQTTHLPTNTVLKKRSLFND 150
Query: 244 A-EIKPNYPK 270
A I PN K
Sbjct: 151 AISIVPNKKK 160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,138,092
Number of Sequences: 5004
Number of extensions: 17926
Number of successful extensions: 139
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 104153322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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