Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00033
(348 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 35 0.013
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 33 0.040
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 33 0.040
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 33 0.040
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 33 0.040
At5g16180.1 68418.m01891 hypothetical protein contains Pfam doma... 33 0.052
At2g38580.1 68415.m04739 expressed protein ; expression supporte... 33 0.052
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 33 0.069
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 33 0.069
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 32 0.091
At2g02410.1 68415.m00181 expressed protein 32 0.12
At5g18590.2 68418.m02198 kelch repeat-containing protein identic... 31 0.16
At5g18590.1 68418.m02197 kelch repeat-containing protein identic... 31 0.16
At3g22790.1 68416.m02873 kinase interacting family protein simil... 31 0.16
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 31 0.28
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 31 0.28
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 30 0.37
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 30 0.37
At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical... 29 0.64
At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical... 29 0.64
At4g22540.2 68417.m03252 oxysterol-binding family protein simila... 29 0.85
At4g22540.1 68417.m03253 oxysterol-binding family protein simila... 29 0.85
At4g12460.1 68417.m01971 oxysterol-binding family protein simila... 29 0.85
At3g55060.1 68416.m06115 expressed protein contains weak similar... 29 0.85
At2g46380.1 68415.m05773 hypothetical protein weak similarity to... 29 0.85
At5g40450.1 68418.m04905 expressed protein 29 1.1
At3g59300.1 68416.m06610 expressed protein hypothetical protein ... 29 1.1
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 29 1.1
At3g29660.1 68416.m03739 hypothetical protein 29 1.1
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 29 1.1
At4g36270.1 68417.m05158 ATP-binding region, ATPase-like domain-... 28 1.5
At4g26450.1 68417.m03805 expressed protein 28 1.5
At1g24560.1 68414.m03090 expressed protein 28 1.5
At5g23970.1 68418.m02817 transferase family protein similar to ... 28 2.0
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 28 2.0
At1g52410.1 68414.m05914 caldesmon-related weak similarity to Ca... 28 2.0
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 27 2.6
At5g40410.1 68418.m04901 pentatricopeptide (PPR) repeat-containi... 27 2.6
At5g26350.1 68418.m03150 hypothetical protein 27 2.6
At4g31570.1 68417.m04483 expressed protein 27 2.6
At1g74830.1 68414.m08670 expressed protein contains Pfam profile... 27 2.6
At1g11420.1 68414.m01312 agenet domain-containing protein contai... 27 2.6
At5g09450.1 68418.m01094 pentatricopeptide (PPR) repeat-containi... 27 3.4
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 27 3.4
At4g25070.1 68417.m03596 expressed protein ; expression supporte... 27 3.4
At4g14840.1 68417.m02281 expressed protein 27 3.4
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 3.4
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 27 3.4
At2g42860.1 68415.m05307 expressed protein 27 3.4
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 27 3.4
At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membr... 27 3.4
At1g18990.1 68414.m02362 expressed protein contains Pfam profile... 27 3.4
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 27 4.5
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 27 4.5
At1g56040.1 68414.m06434 U-box domain-containing protein contain... 27 4.5
At1g21660.1 68414.m02711 expressed protein low similarity to SP|... 27 4.5
At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5... 26 6.0
At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family pr... 26 6.0
At4g18240.1 68417.m02709 starch synthase-related protein contain... 26 6.0
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 26 6.0
At3g30640.1 68416.m03878 Ulp1 protease family protein contains P... 26 6.0
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 26 6.0
At1g52080.1 68414.m05875 actin binding protein family contains P... 26 6.0
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 26 6.0
At5g50840.2 68418.m06299 expressed protein 26 7.9
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 26 7.9
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 26 7.9
At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing ... 26 7.9
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 26 7.9
At2g21510.1 68415.m02560 DNAJ heat shock N-terminal domain-conta... 26 7.9
At1g12150.1 68414.m01407 expressed protein contains Pfam profile... 26 7.9
At1g11300.1 68414.m01298 S-locus lectin protein kinase family pr... 26 7.9
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 35.1 bits (77), Expect = 0.013
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 4 ELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHE 162
+L+ + + + Q+K A E E+++K ++ L Q+ E K KN LQHE
Sbjct: 234 QLLLLKQHVSSLQMKEEEAMNKDTEVERKLKAVQDLEVQVMELKRKNRELQHE 286
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 33.5 bits (73), Expect = 0.040
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 43 LKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSN 216
LK E T+KE K ++ NK L +E L+H DA+ D + ++ DPS++
Sbjct: 157 LKLGKCEETIKECTKALELNPTYNKALVRRAEAHEKLEHFEDAVTDLKKILELDPSND 214
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 33.5 bits (73), Expect = 0.040
Identities = 20/90 (22%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 EELITVSRDRDNF---QLKYVSAETTLKES--EKQVKEIEQLNKQLSETKNKNELLQHEI 165
EEL +S++RD +L+ + + + + + E+++L +L E++++ E ++E+
Sbjct: 125 EELRKLSQERDKTWQSELEAMQRQHGMDSTALSSAINEVQKLKSKLFESESELEQSKYEV 184
Query: 166 DALKDALRQMKHDPSSNVDVASLIDHAEIK 255
+L+ +RQ++ + ++ D +S ++ E+K
Sbjct: 185 RSLEKLVRQLEEERVNSRDSSSSMEVEELK 214
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 33.5 bits (73), Expect = 0.040
Identities = 20/90 (22%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 EELITVSRDRDNF---QLKYVSAETTLKES--EKQVKEIEQLNKQLSETKNKNELLQHEI 165
EEL +S++RD +L+ + + + + + E+++L +L E++++ E ++E+
Sbjct: 125 EELRKLSQERDKTWQSELEAMQRQHGMDSTALSSAINEVQKLKSKLFESESELEQSKYEV 184
Query: 166 DALKDALRQMKHDPSSNVDVASLIDHAEIK 255
+L+ +RQ++ + ++ D +S ++ E+K
Sbjct: 185 RSLEKLVRQLEEERVNSRDSSSSMEVEELK 214
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 33.5 bits (73), Expect = 0.040
Identities = 20/90 (22%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 EELITVSRDRDNF---QLKYVSAETTLKES--EKQVKEIEQLNKQLSETKNKNELLQHEI 165
EEL +S++RD +L+ + + + + + E+++L +L E++++ E ++E+
Sbjct: 127 EELRKLSQERDKTWQSELEAMQRQHGMDSTALSSAINEVQKLKSKLFESESELEQSKYEV 186
Query: 166 DALKDALRQMKHDPSSNVDVASLIDHAEIK 255
+L+ +RQ++ + ++ D +S ++ E+K
Sbjct: 187 RSLEKLVRQLEEERVNSRDSSSSMEVEELK 216
>At5g16180.1 68418.m01891 hypothetical protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 718
Score = 33.1 bits (72), Expect = 0.052
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHE 162
+E+ + DR+ +Y E T +ES+ ++ E+ KQL ET LL+ +
Sbjct: 450 DEVADLVEDRERLLSRYQHFEETKRESDIELLEVVTNGKQLKETNKSGTLLEFQ 503
>At2g38580.1 68415.m04739 expressed protein ; expression supported
by MPSS
Length = 377
Score = 33.1 bits (72), Expect = 0.052
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +1
Query: 10 ITVSRDRDNFQLKYVSAETTLKESEKQVKEI--------EQLNKQLSETKNKNELLQHEI 165
+ + D + K +E L+E+ KQ++E E+L ++L + KNKN++L E+
Sbjct: 64 VVATEDDSGVENKSQGSEVLLEETIKQLREENGSYLQKEEKLEERLVQYKNKNDMLLREM 123
Query: 166 DALKDALRQMKHDPSS 213
+ + +RQ+ + S+
Sbjct: 124 SSTEAQMRQLLDERST 139
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 32.7 bits (71), Expect = 0.069
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +1
Query: 4 ELITVSRDRDNFQLKYVSAETTLK-ESE-KQVKE-IEQLNKQLSETKNKNELLQHEIDAL 174
EL +S +RDNF +K + + + E+E K+++E IE L L + + + +++ E + L
Sbjct: 407 ELQFISEERDNFSMKLMKNQKEIDVEAELKKLREAIENLKADLMDKETELQIVSDENETL 466
Query: 175 KDALRQMKHD 204
K + + + D
Sbjct: 467 KSDIHKSETD 476
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 32.7 bits (71), Expect = 0.069
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 40 QLKYVSAETTLKESEKQV---KEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPS 210
Q+ +SA E E + K +E +NK L +T+N + L E+ LKD+ R+ + + S
Sbjct: 169 QVSDLSASLKAAEEENKAISSKNVETMNK-LEQTQNTIQELMAELGKLKDSHREKESELS 227
Query: 211 SNVDV 225
S V+V
Sbjct: 228 SLVEV 232
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 32.3 bits (70), Expect = 0.091
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 ETTLKESEKQVKEIEQLNKQLSETKNKN-ELLQHEIDALKDALRQMKHDPSS 213
E ++E K+V EI+Q N L+E K ELL+ AL+D LRQ K S+
Sbjct: 179 EQQMEEKIKEVVEIKQRN--LAEENQKTMELLKDREQALQDQLRQAKDSVST 228
>At2g02410.1 68415.m00181 expressed protein
Length = 308
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 55 SAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDA-LKDALRQMKHDPSSN 216
S++ + E + KE+E++ ++ T + LL+H +D+ + DAL+ ++ S N
Sbjct: 250 SSKALVSEIKSMHKEVEKMMQETRSTSFQGRLLKHNLDSEVVDALKDLRDKLSEN 304
>At5g18590.2 68418.m02198 kelch repeat-containing protein identical
to RanGAP1 interacting protein (GI:21950739)
[Arabidopsis thaliana]; similar to Tip elongation
aberrant protein 1 (Cell polarity protein tea1)
(SP:P87061) [Schizosaccharomyces pombe]; contains Pfam
PF01344: Kelch motif (5 repeats)
Length = 708
Score = 31.5 bits (68), Expect = 0.16
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 58 AETTLKESEKQVKEIEQLNKQLSETKNKN---ELLQHEIDALKDALRQMKHDPSSNVDVA 228
AET + + K + ++ Q S T NK LLQH+ A K DPS+ VD
Sbjct: 315 AETLVFDILKVEWSVASISSQSSVTSNKGFSLVLLQHKDKDFLVAFGGTKKDPSNQVDAF 374
Query: 229 SLIDHAEIKPNYPK 270
++ + P +P+
Sbjct: 375 TIDKNKSESPTHPQ 388
>At5g18590.1 68418.m02197 kelch repeat-containing protein identical
to RanGAP1 interacting protein (GI:21950739)
[Arabidopsis thaliana]; similar to Tip elongation
aberrant protein 1 (Cell polarity protein tea1)
(SP:P87061) [Schizosaccharomyces pombe]; contains Pfam
PF01344: Kelch motif (5 repeats)
Length = 708
Score = 31.5 bits (68), Expect = 0.16
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 58 AETTLKESEKQVKEIEQLNKQLSETKNKN---ELLQHEIDALKDALRQMKHDPSSNVDVA 228
AET + + K + ++ Q S T NK LLQH+ A K DPS+ VD
Sbjct: 315 AETLVFDILKVEWSVASISSQSSVTSNKGFSLVLLQHKDKDFLVAFGGTKKDPSNQVDAF 374
Query: 229 SLIDHAEIKPNYPK 270
++ + P +P+
Sbjct: 375 TIDKNKSESPTHPQ 388
>At3g22790.1 68416.m02873 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 76 ESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
+S++ ++E+L + L E N+LL+H+I ++ LRQ
Sbjct: 1126 DSQELNSKLEKLQESLEEANELNDLLEHQILVKEETLRQ 1164
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 4 ELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLS 126
EL+ V+ +D +L+Y T+ + E++V + K+LS
Sbjct: 336 ELVKVNEVKDGLRLRYQQCLETISKLEREVSHAQDNAKRLS 376
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 30.7 bits (66), Expect = 0.28
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 ELITVSRDRDNFQLKYVSAETTLKESEKQVKE----IEQLNKQLSETKNKNELLQHEIDA 171
E++ ++ N + + + A+T+ E+EK++ E +E+L+K E KNK L+ +
Sbjct: 125 EVLKKFLEQKNKEKELIEAQTS--ETEKKLNELNSRVEKLHKTNEEQKNKIRKLERALKI 182
Query: 172 LKDALRQMKHDPSSNVDVASLIDHAEIKP 258
++ + + KH+ ++ + A + P
Sbjct: 183 SEEEMLRTKHEATTKAKELMEVHGAWLPP 211
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 30.7 bits (66), Expect = 0.28
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 ELITVSRDRDNFQLKYVSAETTLKESEKQVKE----IEQLNKQLSETKNKNELLQHEIDA 171
E++ ++ N + + + A+T+ E+EK++ E +E+L+K E KNK L+ +
Sbjct: 125 EVLKKFLEQKNKEKELIEAQTS--ETEKKLNELNSRVEKLHKTNEEQKNKIRKLERALKI 182
Query: 172 LKDALRQMKHDPSSNVDVASLIDHAEIKP 258
++ + + KH+ ++ + A + P
Sbjct: 183 SEEEMLRTKHEATTKAKELMEVHGAWLPP 211
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 30.3 bits (65), Expect = 0.37
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +1
Query: 16 VSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQM 195
V R+R+ + A +KE+ V++ E++N SE + LQ E A ++ +
Sbjct: 958 VIREREAARKAIEEAPPVIKETPVLVEDTEKINSLTSEVEALKASLQAERQAAENLRKAF 1017
Query: 196 KHDPSSNVDVASLIDHAEIK 255
+ N ++A+ +++A K
Sbjct: 1018 SEAEARNSELATELENATRK 1037
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 30.3 bits (65), Expect = 0.37
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 19 SRDRDNFQLKYVSAETTL--KESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
S R+N + + ++ +L KESE E++ + E + LLQ E++ ++
Sbjct: 774 SLQRENMKKIELESKISLMRKESESLAAELQVIKLAKDEKETAISLLQTELETVRSQCDD 833
Query: 193 MKHDPSSN 216
+KH S N
Sbjct: 834 LKHSLSEN 841
>At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical to
G-box binding factor 1 SP:P42774 from [Arabidopsis
thaliana]; contains Pfam profile: PF00170 bZIP
transcription factor
Length = 313
Score = 29.5 bits (63), Expect = 0.64
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +1
Query: 46 KYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDV 225
K + E+ + ++ E EQL +++ N+N+ L+ E+ L ++K + +S D
Sbjct: 227 KQSNRESARRSRLRKQAECEQLQQRVESLSNENQSLRDELQRLSSECDKLKSENNSIQDE 286
Query: 226 ASLIDHAEIKPN 261
+ AE N
Sbjct: 287 LQRVLGAEAVAN 298
>At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical to
G-box binding factor 1 SP:P42774 from [Arabidopsis
thaliana]; contains Pfam profile: PF00170 bZIP
transcription factor
Length = 315
Score = 29.5 bits (63), Expect = 0.64
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +1
Query: 46 KYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDV 225
K + E+ + ++ E EQL +++ N+N+ L+ E+ L ++K + +S D
Sbjct: 229 KQSNRESARRSRLRKQAECEQLQQRVESLSNENQSLRDELQRLSSECDKLKSENNSIQDE 288
Query: 226 ASLIDHAEIKPN 261
+ AE N
Sbjct: 289 LQRVLGAEAVAN 300
>At4g22540.2 68417.m03252 oxysterol-binding family protein similar
to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
cuniculus}; contains Pfam profiles PF00169: PH domain,
PF01237: Oxysterol-binding protein
Length = 510
Score = 29.1 bits (62), Expect = 0.85
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 SEKQVKEIEQLN-KQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVASLIDH 243
+E VKE EQ+ + SE + +LL E L DALRQ++ ++N++V + H
Sbjct: 2 NENLVKECEQIMLSEFSEMHGQVKLLHEERTNLLDALRQLE---AANLEVGASGKH 54
>At4g22540.1 68417.m03253 oxysterol-binding family protein similar
to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
cuniculus}; contains Pfam profiles PF00169: PH domain,
PF01237: Oxysterol-binding protein
Length = 721
Score = 29.1 bits (62), Expect = 0.85
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 SEKQVKEIEQLN-KQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVASLIDH 243
+E VKE EQ+ + SE + +LL E L DALRQ++ ++N++V + H
Sbjct: 213 NENLVKECEQIMLSEFSEMHGQVKLLHEERTNLLDALRQLE---AANLEVGASGKH 265
>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 694
Score = 29.1 bits (62), Expect = 0.85
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 79 SEKQVKEIEQL-NKQLSETKNKNELLQHEIDALKDALRQMK 198
+E VKE EQ+ + + E + + +LL E L DALRQ++
Sbjct: 191 NESLVKECEQIVDSEFCEVQEQIKLLHEERKKLLDALRQLE 231
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 29.1 bits (62), Expect = 0.85
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 94 KEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
KEIEQL +L+ NE+L+ E+ + D L H+
Sbjct: 753 KEIEQLQAELAAAVRGNEILRCEVQSSLDNLSVTTHE 789
>At2g46380.1 68415.m05773 hypothetical protein weak similarity to
extra-large G-protein [Arabidopsis thaliana] GI:3201682
Length = 732
Score = 29.1 bits (62), Expect = 0.85
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 67 TLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDV 225
++K E + KEIE + E + N L+H+ D + + +DPSS ++V
Sbjct: 52 SVKSVENRSKEIEVTSGSSEEESDSNASLRHQQDGQTETW-DVHNDPSSKMNV 103
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +1
Query: 7 LITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDAL 186
L+ V ++ + ++K AE L EK+ E + Q ++ N E HE ++LK
Sbjct: 1193 LLEVRKEEEEAEMK-TDAEPRLDAIEKEELETVKTVVQDAKIVNNEETTAHESESLKGDN 1251
Query: 187 RQMKHDPSSNVDVASLIDHAE 249
Q K+ + V+ +D AE
Sbjct: 1252 HQEKN--AEPVEATQNLDDAE 1270
>At3g59300.1 68416.m06610 expressed protein hypothetical protein
T2J13.20 - Arabidopsis thaliana, PIR:T46116
Length = 459
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 141 KRTTATRNRCFKGCIKANET*SLIERRCGLTY 236
KRT+ RNR F GC AN S++ RC + +
Sbjct: 31 KRTSNARNRVFDGCGSANL--SVLSSRCKIPF 60
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 16 VSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNEL 150
++R + + + KE K KEIEQ+ K + E K EL
Sbjct: 315 IARIKAKIETNRKDVDKRKKEKGKHSKEIEQMQKSIKELNKKMEL 359
>At3g29660.1 68416.m03739 hypothetical protein
Length = 138
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 25 DRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDA 183
D D F K E ++E Q E E++ + + K +NEL + DAL ++
Sbjct: 60 DLDKFNAKIGEVEQQVRELRTQSLEFEKMVCEKVQMKIENELFEKVDDALAES 112
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 55 SAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
S + + E +K++ +LN L ETK+ N + +I+ L+ + + D
Sbjct: 302 SKSSASESMESVMKQLAELNHVLHETKSDNAAQKEKIELLEKTIEAQRTD 351
>At4g36270.1 68417.m05158 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 625
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 31 DNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
+N QL E KE+E + + + L K+L ETK+K L +DA + ++Q
Sbjct: 558 ENIQLFMRCEEYVKKETELE-QTVSNLAKELEETKSKCARLALLVDAKRREMQQ 610
>At4g26450.1 68417.m03805 expressed protein
Length = 1248
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 91 VKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKH 201
V +EQL L ET++ E+ + I L+ Q KH
Sbjct: 1030 VNNVEQLENMLEETRSMLEVKESHIRDLESTTNQSKH 1066
>At1g24560.1 68414.m03090 expressed protein
Length = 678
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 61 ETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVAS 231
+ LKE E E+E +NK E K + D LK + H S ++ S
Sbjct: 87 DEALKEKENLTNELENVNKGKDEMSKKLDEALRSRDGLKAEIENSSHMLVSGIEKIS 143
>At5g23970.1 68418.m02817 transferase family protein similar to
acetyl CoA: benzylalcohol acetyltransferase; BEAT
[Clarkia breweri][GI:3170250][PMID:9628024],
deacetylvindoline 4-O-acetyltransferase [Catharanthus
roseus][GI:4091808][PMID:9681034]
Length = 428
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 70 LKESEKQVKEIEQLNKQLSETKNK-NELLQHEIDALKDAL 186
LKES + EIE+ +L +TK + NEL++++ + K ++
Sbjct: 289 LKESSESKMEIEETVSKLQKTKQELNELIRNDSEDAKSSV 328
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +1
Query: 31 DNFQLKYVSAETTLKESEKQ-VK-EIEQLNKQLSETKNKN-ELLQHEIDALKDALRQMKH 201
D +L++ + ++ ++ VK E + +++LS + K E ++HE +A D+L+Q+K
Sbjct: 106 DQIKLEFEAHHNSINQAGSDGVKAESKDDDEELSAHRQKMLEEIEHEFEAASDSLKQLKT 165
Query: 202 D 204
D
Sbjct: 166 D 166
>At1g52410.1 68414.m05914 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 755
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +1
Query: 31 DNFQLKYVSAETTLKESEKQ-VK-EIEQLNKQLSETKNKN-ELLQHEIDALKDALRQMKH 201
D +L++ + ++ ++ VK E + +++LS + K E ++HE +A D+L+Q+K
Sbjct: 106 DQIKLEFEAHHNSINQAGSDGVKAESKDDDEELSAHRQKMLEEIEHEFEAASDSLKQLKT 165
Query: 202 D 204
D
Sbjct: 166 D 166
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 27.5 bits (58), Expect = 2.6
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Frame = +1
Query: 1 EELITVSRDRDNF--QLKYVSAE--TTLKE-SEKQVK----EIEQLNKQLSETKNKNELL 153
EEL SRDR+ Q K + E +LKE +EK+++ E+++L+ + E K E
Sbjct: 664 EELENSSRDREKAFEQEKKLEEERIQSLKEMAEKELEHVQVELKRLDAERLEIKLDRERR 723
Query: 154 QHEIDALKDALRQMK 198
+ E LKD++ ++K
Sbjct: 724 EREWAELKDSVEELK 738
>At5g40410.1 68418.m04901 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1155
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 46 KYVSAETTLKESEKQVKEIEQLNKQLSET---KNKNELLQHEIDALKDALRQMKHDPSSN 216
K+V + + ESEK K+++++ K++ K+K E + H++ +D +M + S
Sbjct: 1033 KFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVG--EDVKEEMINQHSEK 1090
Query: 217 VDVA 228
+ +A
Sbjct: 1091 IAMA 1094
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 61 ETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQM 195
E K+ EK+ K++E+ KQL E K + E + + LRQ+
Sbjct: 61 EEEKKKLEKEKKQLEEEKKQLEEEKKQLEFEVMGANEREKVLRQL 105
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 31 DNFQLKYVSAETTLKESEKQVKEIE-QLNKQLSETKNKNELLQ 156
DN ++ S T L+ S+KQV ++E L +SE N +E L+
Sbjct: 1603 DNLEVYCQSVTTDLEVSQKQVGDVEGNLQSCVSERVNLSERLE 1645
>At1g74830.1 68414.m08670 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 542
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 22 RDRDNFQLKYVSAETTLKESEKQ--VKEIEQLNKQLSETKNKNELLQHEIDAL 174
R ++ VSA+ K+ VKE+ ++ ++LS ++ +LL+H D L
Sbjct: 458 RSEESTAENVVSADEEKGSESKEGIVKELSEITERLSTLQSNGDLLKHIADVL 510
>At1g11420.1 68414.m01312 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 604
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 91 VKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVASLIDHAE 249
+KE+E+ + L + NK+ + + + D+LR P +V L+DH E
Sbjct: 172 IKELEKDKRFLVKYWNKSYSCRESKNLIVDSLRLRPMQPPLSVGKYELLDHVE 224
>At5g09450.1 68418.m01094 pentatricopeptide (PPR) repeat-containing
protein low similiarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile: PF01535 PPR
repeat
Length = 409
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 163 IDALKDALRQMKHDPSSNVDVASLIDHAEIKPN 261
ID L+ L +M+HD SSN ID I N
Sbjct: 243 IDELRKILEEMRHDASSNEGWVRYIDLTSIYIN 275
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 73 KESEKQVKEIEQLNKQLSETKNK-NELLQHEIDALKDA-LRQMKHDPSSNVDVAS 231
+ EK+ +E +Q+ KQL E K LQ E A ++A +R+++ + + + A+
Sbjct: 139 RRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAA 193
>At4g25070.1 68417.m03596 expressed protein ; expression supported
by MPSS
Length = 765
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKN-ELLQHEIDALK 177
+EL + + DN K AE + +E + KE+E+ L E N + +LL+ + AL+
Sbjct: 408 DELDMLQEENDNIMDKLQRAEERREAAEARAKELEKQVASLGEGANFDVKLLKRKEAALR 467
>At4g14840.1 68417.m02281 expressed protein
Length = 555
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKD 180
EE+ T S Q V A+ E ++ L + S+ K+K +Q E+D +
Sbjct: 409 EEIPTFSEVFQENQSMIVEADRFFSALELNKAKVASLKYEYSDLKDKLGNIQTEVDRNSE 468
Query: 181 ALRQM 195
+RQ+
Sbjct: 469 TIRQI 473
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 115 KQLSETKNKNELLQHEIDALKDALRQMK 198
K LS+ +K L + +DA+K+ LRQMK
Sbjct: 265 KLLSKLLDKKNLEINHLDAVKERLRQMK 292
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 55 SAETTLKESEKQV----KEIEQLNKQLSETKNKNELLQHEIDALKDALRQMK 198
+AET LK+ ++ KE+++ QL +++ +++E+DA K+ + +K
Sbjct: 409 TAETELKQLNTKISHCEKELKEKKSQLMSKQDEAVAVENELDARKNDVESVK 460
>At2g42860.1 68415.m05307 expressed protein
Length = 224
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +1
Query: 28 RDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDP 207
R+NF S L+ E E EQ N+ + NE+L E A + D
Sbjct: 93 RNNFPYVNNSERMVLQFQEDTSAETEQTNEMFHSLNDSNEIL--EGTKSSSASDEDTEDS 150
Query: 208 SSNVDVAS 231
SSN D+ S
Sbjct: 151 SSNSDLDS 158
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAETT----LKESEKQVKEIEQLNKQLSETKNKNELLQHEID 168
EEL + + ++ +AE LKE E + IEQL L + + + + + + +
Sbjct: 203 EELKKIHEEIPEYKTHSETAEAAKLQVLKELESTKRLIEQLKLNLDKAQTEEQQAKQDSE 262
Query: 169 ALKDALRQMKHDPSSNVDVAS 231
K + +M+ + +V VA+
Sbjct: 263 LAKLRVEEMEQGIAEDVSVAA 283
>At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membrane
protein (PEX10) identical to zinc-binding peroxisomal
integral membrane protein GI:4337011 from [Arabidopsis
thaliana]
Length = 381
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 242 WSISEATSTFDEGSCFICLN 183
WS S++TST G C +CL+
Sbjct: 313 WSTSDSTSTEAVGKCTLCLS 332
>At1g18990.1 68414.m02362 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 524
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 91 VKEIEQLNKQLSETKNKNELLQHEIDAL 174
VKEI ++ ++L+ ++K ELLQ D L
Sbjct: 468 VKEISEITERLNAIESKGELLQQISDVL 495
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 46 KYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
+ V+ ETT+ + ++ ++ EQ + E +KNE E++ LK L +K +
Sbjct: 374 RIVTLETTVAKQKEDLEVSEQRLGSVEEEVSKNE---KEVEKLKSELETVKEE 423
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +1
Query: 1 EELITVSRDRDNFQLKYVSAET-------TLKESEKQVKEIEQLNKQLSETKNKNELLQH 159
EE++ + D ++ V E +E+EKQVKE+ + K++ E + K +
Sbjct: 653 EEIVEAVKHYDEHKMSVVEKEVWERDVLLAKQETEKQVKELGEKEKKIKEWRAKMTEMAA 712
Query: 160 EIDALKDALRQMKHDPSSNVDVASLIDHAEIKP 258
++ L D R H S ++S +D + KP
Sbjct: 713 KLGDL-DMKRARLH--KSFTFLSSKVDKFQGKP 742
>At1g56040.1 68414.m06434 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 437
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 31 DNFQLKYVSAETTLKESE----KQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
+ F+ KY +ESE K+ KE+E++ +L + + E L E+ +D Q
Sbjct: 240 EEFERKYEGEMILRRESEIALEKEKKELEEVKLKLETYEREQENLSSEVRTWQDKYEQ 297
>At1g21660.1 68414.m02711 expressed protein low similarity to
SP|O14976 Cyclin G-associated kinase (EC 2.7.1.-) {Homo
sapiens}; supporting cDNA gi|20466222|gb|AY099577.1|
Length = 523
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/43 (25%), Positives = 27/43 (62%)
Frame = +3
Query: 213 ERRCGLTYRPR*NQAQLSKALVERNNLANKYEVEQKERVRLDQ 341
ERR R + ++++++A+ + NN ++ +EQ++R R+ +
Sbjct: 384 ERRKARWDREQRTKSRVAQAVADMNNRDHQSRIEQEQRTRISE 426
>At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5
protein GI:2251085 from [Arabidopsis thaliana]
Length = 168
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/61 (18%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 25 DRDNFQLKYVSAETTLKESEKQVKE--IEQLNKQLSETKNKNELLQHEIDALKDALRQMK 198
+++N +LK + + ++ K+ + +L ++ + +NKN L+ + L++ + ++
Sbjct: 86 EKENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQNENQMLR 145
Query: 199 H 201
H
Sbjct: 146 H 146
>At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain, weak hit to PF01661: Appr-1-p
processing enzyme family
Length = 912
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +1
Query: 28 RDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKD 180
+D +L S++T + +S + +KE + NK+ +++K E ++L+D
Sbjct: 651 QDQSKLPKRSSQTAVSDSGEDIKEDSERNKKYKGSQDKAVTNNLESESLED 701
>At4g18240.1 68417.m02709 starch synthase-related protein contains
similarity to starch synthase GI:4582783 from [Vigna
unguiculata]
Length = 1040
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 94 KEIEQLNKQLSETKNKNELLQHEIDALKD 180
KE+E L + +N E+L+ E+D++KD
Sbjct: 280 KELETLKLENLSLRNDIEMLKSELDSVKD 308
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 82 EKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
E+ +KE + + + NEL+QH++ L++ L +
Sbjct: 393 EESLKEANVYKESSEKIQQYNELMQHKVTLLEERLEK 429
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Frame = +1
Query: 61 ETTLKESEKQV---------KEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHD 204
E T+KE +KQ+ +EI Q+ K+L K+ NE+L+ + + + L++ D
Sbjct: 224 EATIKEKQKQIEEMKGWSSKQEISQMKKELE--KSHNEMLEGIKEKISNQLKESLED 278
>At3g30640.1 68416.m03878 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 661
Score = 26.2 bits (55), Expect = 6.0
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 31 DNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHE--IDALKDALRQMKHD 204
D + K V +K SEK+ K ++ + +SET K + + H + + + ++ K +
Sbjct: 29 DIHEAKLVKGYWDVKTSEKKKKLVKDKDADVSETPAKKQKVSHSEGVHSREKDAQKKKKN 88
Query: 205 PSSNVDVASLIDHAE 249
V V S D E
Sbjct: 89 KKKEVAVKSDEDEDE 103
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 31 DNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHE---IDALKDALRQMKH 201
D + K + + EK++ ++L ++ E K K ++++HE + +K +++MK
Sbjct: 388 DEHKRKKEETLNKILQLEKELDSKQKLQMEIQELKGKLKVMKHEDEDDEGIKKKMKKMKE 447
Query: 202 D 204
+
Sbjct: 448 E 448
>At1g52080.1 68414.m05875 actin binding protein family contains
Prosite PS00019: Actinin-type actin-binding domain
signature 1; similar to actin binding protein
(GI:28071265) [Arabidopsis thaliana]; similar to A-type
inclusion protein (ATI) (Swiss-Prot:P16602) [Cowpox
virus]
Length = 573
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 31 DNFQL--KYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALK 177
+NF+L K S + ++ +EIE L + + +++NE L+ +++ L+
Sbjct: 296 ENFELSEKLESVQIIANSKLEEPEEIETLREDCNRLRSENEELKKDVEQLQ 346
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 85 KQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
+ V++ +L + L+ TKN++ LL +ID DA R+
Sbjct: 273 QSVRDDGELREILTSTKNRSILLIEDIDCGADASRR 308
>At5g50840.2 68418.m06299 expressed protein
Length = 405
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 55 SAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
S + L+ +K+ + +++ LSE +N L E+D+LK +Q
Sbjct: 76 SIKLELEFEQKEKEASPPISQTLSEGSTQNSTLSKEMDSLKPKKQQ 121
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 37 FQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKN 144
F + + + +ESEK VKE++ + +QLS + N++
Sbjct: 118 FDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQD 153
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 37 FQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKN 144
F + + + +ESEK VKE++ + +QLS + N++
Sbjct: 118 FDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQD 153
>At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing
protein heterogeneous nuclear ribonucleoprotein R, Homo
sapiens, PIR:T02673; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 471
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 154 QHEIDA--LKDALRQMKHDPSSNVDVASLIDHAEIKPNYPKL 273
++EID L L + + D +N + + ++++PNYP L
Sbjct: 331 RYEIDGHMLDCTLAKPQADQKTNTNTVQNVQKSQLQPNYPPL 372
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 70 LKESEKQVKEIEQLNKQLSET-KNKNELLQHEIDALKDALRQ 192
+ + + +++ I Q K ET KN ++ L HE D L++ L++
Sbjct: 589 IMKEKLEMERIVQREKDREETAKNADKKLLHECDVLQNRLQE 630
>At2g21510.1 68415.m02560 DNAJ heat shock N-terminal
domain-containing protein similar to SP|P39101 CAJ1
protein, Saccharomyces cerevisiae; contains Pfam profile
PF00226 DnaJ domain
Length = 346
Score = 25.8 bits (54), Expect = 7.9
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 22 RDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQ 192
RD+ + V A + + E+ +LN+ E NK E +Q I+A DAL Q
Sbjct: 214 RDKGHHMKSQVMAASGAVSLLQLQDEVNKLNEHQGE--NKEEHIQKAIEAKMDALLQ 268
>At1g12150.1 68414.m01407 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 548
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +1
Query: 97 EIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVASLIDHAEIK 255
E+E++NK+ +E NK E I+ +K A ++ + + + A + +E++
Sbjct: 486 ELEEINKRRAEADNKLEANLKAIEEMKQA-TELAQKSAESAEAAKRMVESELQ 537
>At1g11300.1 68414.m01298 S-locus lectin protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains S-locus glycoprotein family domain,
Pfam:PF00954
Length = 1635
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 113 FNCSISLTCFSDSFNVVSADTYFSWKLSRSRLTVINS 3
F C + L+CF S ++ +FS KL+ S T+++S
Sbjct: 10 FVCILVLSCFFLSVSLAQERAFFSGKLNDSE-TIVSS 45
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,747,510
Number of Sequences: 28952
Number of extensions: 87007
Number of successful extensions: 526
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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