Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00030
         (616 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126902-1|BAC86743.1|  247|Homo sapiens protein ( Homo sapiens ...    36   0.15 
BC101162-1|AAI01163.1|  201|Homo sapiens keratin associated prot...    30   5.6  
BC101160-1|AAI01161.1|  201|Homo sapiens keratin associated prot...    30   5.6  
BC101159-1|AAI01160.1|  201|Homo sapiens keratin associated prot...    30   5.6  
BC004212-1|AAH04212.1|  201|Homo sapiens keratin associated prot...    30   5.6  
BC004180-1|AAH04180.1|  201|Homo sapiens keratin associated prot...    30   5.6  
AJ406943-1|CAC27582.1|  201|Homo sapiens keratin associated prot...    30   5.6  

>AK126902-1|BAC86743.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44954 fis, clone BRAWH2010364. ).
          Length = 247

 Score = 35.5 bits (78), Expect = 0.15
 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -2

Query: 108 CCY-RNSACCSRCRSFGCHXCCPSVNLCPRSHHGP 7
           CC+   S CCS   S  C  CC     CPR  H P
Sbjct: 161 CCFLHRSPCCSLQGSLHCSPCCSLHISCPRPSHSP 195


>BC101162-1|AAI01163.1|  201|Homo sapiens keratin associated protein
           4-12 protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLCPR 22
           CC  +S C S C S  C  CC    +C R
Sbjct: 145 CCISSSCCPSCCESSCCRPCCCLRPVCGR 173


>BC101160-1|AAI01161.1|  201|Homo sapiens keratin associated protein
           4-12 protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLCPR 22
           CC  +S C S C S  C  CC    +C R
Sbjct: 145 CCISSSCCPSCCESSCCRPCCCLRPVCGR 173


>BC101159-1|AAI01160.1|  201|Homo sapiens keratin associated protein
           4-12 protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLCPR 22
           CC  +S C S C S  C  CC    +C R
Sbjct: 145 CCISSSCCPSCCESSCCRPCCCLRPVCGR 173


>BC004212-1|AAH04212.1|  201|Homo sapiens keratin associated protein
           4-12 protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLCPR 22
           CC  +S C S C S  C  CC    +C R
Sbjct: 145 CCISSSCCPSCCESSCCRPCCCLRPVCGR 173


>BC004180-1|AAH04180.1|  201|Homo sapiens keratin associated protein
           4-12 protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLCPR 22
           CC  +S C S C S  C  CC    +C R
Sbjct: 145 CCISSSCCPSCCESSCCRPCCCLRPVCGR 173


>AJ406943-1|CAC27582.1|  201|Homo sapiens keratin associated protein
           4.12 protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLCPR 22
           CC  +S C S C S  C  CC    +C R
Sbjct: 145 CCISSSCCPSCCESSCCRPCCCLRPVCGR 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,071,928
Number of Sequences: 237096
Number of extensions: 1036459
Number of successful extensions: 1981
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)