Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00030
(616 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.78
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.78
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 1.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 1.8
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.1
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 4.1
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 22 4.1
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 22 4.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 4.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.6
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 9.6
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.6 bits (51), Expect = 0.78
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 54 HDNQNSYNDYNRQSFGN 104
+ N N+YN+YN ++ N
Sbjct: 324 YSNYNNYNNYNNNNYNN 340
Score = 21.8 bits (44), Expect = 5.5
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3
Query: 60 NQNSYNDYNRQSF 98
N N+YN+YN++ +
Sbjct: 334 NNNNYNNYNKKLY 346
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/26 (30%), Positives = 19/26 (73%)
Frame = +3
Query: 42 WDNXHDNQNSYNDYNRQSFGNSXXRI 119
++N ++N N+YN+YN ++ N+ ++
Sbjct: 327 YNNYNNNYNNYNNYN-NNYNNNYKKL 351
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 1.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFGN 104
N ++ N+YN+YN ++ N
Sbjct: 330 NNNNYNNNYNNYNNNNYNN 348
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 248 KEGTDNTDYSHNIESSR 298
K +DN+DYSH + +R
Sbjct: 225 KHESDNSDYSHTTDENR 241
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +3
Query: 42 WDNXHDNQNSYNDYNRQSFGN 104
+ N ++ N+YN+YN++ + N
Sbjct: 91 YSNYNNYNNNYNNYNKKLYYN 111
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFG-NSXXRIP 122
N ++N N+YN+Y + + N +IP
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFG-NSXXRIP 122
N ++N N+YN+Y + + N +IP
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFG-NSXXRIP 122
N ++N N+YN+Y + + N +IP
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFG-NSXXRIP 122
N ++N N+YN+Y + + N +IP
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFG-NSXXRIP 122
N ++N N+YN+Y + + N +IP
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFG-NSXXRIP 122
N ++N N+YN+Y + + N +IP
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFG-NSXXRIP 122
N ++N N+YN+Y + + N +IP
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSFG-NSXXRIP 122
N ++N N+YN+Y + + N +IP
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 90 NNYNYNNNYNNYNKHNY 106
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 323 NNYNYNNNYNNYNKHNY 339
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 48 NXHDNQNSYNDYNRQSF 98
N ++ N+YN+YN+ ++
Sbjct: 323 NNYNYNNNYNNYNKHNY 339
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 54 HDNQNSYNDYNR 89
+DNQN+ ND NR
Sbjct: 521 NDNQNNQNDNNR 532
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 552 YNFKILFLLWLRYKK 596
+N +IL +LW YKK
Sbjct: 96 WNNQILHILWTSYKK 110
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 552 YNFKILFLLWLRYKK 596
+N +IL +LW YKK
Sbjct: 79 WNNQILHILWTSYKK 93
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 4.1
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +3
Query: 54 HDNQNSYNDYNRQSF 98
+ N N+YN+YN++ +
Sbjct: 91 YSNYNNYNNYNKKLY 105
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 45 DNXHDNQNSYNDYN 86
+N + N N+YN+YN
Sbjct: 92 NNNNYNNNNYNNYN 105
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 42 WDNXHDNQNSYNDYNRQSFG-NSXXRIP 122
++N + N N+YN+Y + + N +IP
Sbjct: 101 YNNYNYNNNNYNNYKKLYYNINYIEQIP 128
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 54 HDNQNSYNDYNRQSFGNSXXRI 119
H+N N +YN ++ N+ ++
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKL 112
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 54 HDNQNSYNDYNRQSFGNSXXRI 119
H+N N +YN ++ N+ ++
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKL 112
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 54 HDNQNSYNDYNRQSFGNSXXRI 119
H+N N +YN ++ N+ ++
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKL 112
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 54 HDNQNSYNDYNRQSFGNSXXRI 119
H+N N +YN ++ N+ ++
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKL 112
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 248 KEGTDNTDYSHN 283
K+G DN DY N
Sbjct: 108 KDGDDNNDYEDN 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,775
Number of Sequences: 438
Number of extensions: 2780
Number of successful extensions: 41
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -