Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00026
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog... 93 6e-18
UniRef50_O60739 Cluster: Eukaryotic translation initiation facto... 81 3e-14
UniRef50_P41567 Cluster: Eukaryotic translation initiation facto... 79 1e-13
UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor... 69 1e-10
UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15; ... 61 2e-08
UniRef50_Q6MVC9 Cluster: Probable translation initiation factor ... 61 3e-08
UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog... 60 7e-08
UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza sat... 54 3e-06
UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|R... 54 3e-06
UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2... 52 1e-05
UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation facto... 51 3e-05
UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating... 50 4e-05
UniRef50_Q00T99 Cluster: Translation initiation factor SUI1, put... 50 5e-05
UniRef50_Q86AU4 Cluster: Similar to translation initiation facto... 48 2e-04
UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations... 45 0.002
UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;... 40 0.059
UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia scl... 39 0.10
UniRef50_UPI000150A7AF Cluster: Translation initiation factor SU... 38 0.31
UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n... 36 0.96
UniRef50_Q01DM1 Cluster: Transducin / WD-40 repeat protein-like;... 36 1.3
UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, wh... 35 1.7
UniRef50_Q9X1T8 Cluster: Transcriptional regulator, biotin repre... 33 5.1
>UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog;
n=11; Bilateria|Rep: Protein translation factor SUI1
homolog - Drosophila melanogaster (Fruit fly)
Length = 110
Score = 93.1 bits (221), Expect = 6e-18
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSS 255
MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+
Sbjct: 1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSA 49
Score = 92.3 bits (219), Expect = 1e-17
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 68 GTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110
Score = 39.9 bits (89), Expect = 0.059
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFAC 305
EYDLKKIVR+CKKEFAC
Sbjct: 50 EYDLKKIVRSCKKEFAC 66
>UniRef50_O60739 Cluster: Eukaryotic translation initiation factor
1b; n=44; Fungi/Metazoa group|Rep: Eukaryotic
translation initiation factor 1b - Homo sapiens (Human)
Length = 113
Score = 80.6 bits (190), Expect = 3e-14
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>UniRef50_P41567 Cluster: Eukaryotic translation initiation factor
1; n=53; Eukaryota|Rep: Eukaryotic translation
initiation factor 1 - Homo sapiens (Human)
Length = 113
Score = 79.0 bits (186), Expect = 1e-13
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1; n=1; Homo
sapiens|Rep: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1 - Homo
sapiens
Length = 288
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+Q QGDQ NICQ+L + GL K +QLKVH F
Sbjct: 246 GTVIEHPEYGEVIQPQGDQCNNICQFLVELGLAKDDQLKVHVF 288
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
Frame = +1
Query: 70 SVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQ 243
+VS ++++ ++ + +IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQ
Sbjct: 166 AVSTEEKE-SYCKFAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQ 224
Query: 244 GLSSN 258
G++ +
Sbjct: 225 GIADD 229
>UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15;
Pezizomycotina|Rep: Translation initiation factor 3 -
Botryotinia fuckeliana B05.10
Length = 169
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +1
Query: 115 IQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGL 249
I+NL FDPFA+A + D +H+RIQQRNGRKTLTTVQGL
Sbjct: 60 IENLKVFDPFAEADEEPGDQKAAEYIHIRIQQRNGRKTLTTVQGL 104
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLT-KSGL-VKPEQLKVHGF 436
GT+V G+V+QLQGDQR+++ ++LT K GL ++ + +KVHGF
Sbjct: 125 GTIVNDVIMGDVIQLQGDQRKDVQEFLTGKDGLELEAKTIKVHGF 169
>UniRef50_Q6MVC9 Cluster: Probable translation initiation factor
SUI1; n=2; Neurospora crassa|Rep: Probable translation
initiation factor SUI1 - Neurospora crassa
Length = 117
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIK--SSEDDVQDGLVHVRIQQRNGRKTLTTVQGL 249
MSI+NL T+DPFA+A + S + +H+RIQQRNGRKTLTTVQG+
Sbjct: 1 MSIENLKTYDPFAEADEEDSGQTKQTQEYIHIRIQQRNGRKTLTTVQGI 49
Score = 37.5 bits (83), Expect = 0.31
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Frame = +2
Query: 308 GTVV--EHPEYGEVLQLQGDQRENICQWLTK--SGL-VKPEQLKVHGF 436
GT++ E + G+V+QLQGDQR I +LT GL + + +KVHGF
Sbjct: 70 GTIIGDEDSKMGDVIQLQGDQRAKIKDFLTNKDEGLGLDAKTIKVHGF 117
>UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog 2;
n=42; Eukaryota|Rep: Protein translation factor SUI1
homolog 2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 59.7 bits (138), Expect = 7e-08
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTVV+ E G+V+QLQGDQR+N+ +L ++GLVK + +K+HGF
Sbjct: 71 GTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGL 249
+ +Q FDPFADA VH+R+QQRNGRK+LTTVQGL
Sbjct: 4 LEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGL 50
>UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza
sativa|Rep: OSJNBa0089N06.3 protein - Oryza sativa
(Rice)
Length = 580
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
G VVE E G+++QLQGD R ++ +L K+G+V+ + +KVHGF
Sbjct: 538 GNVVEDKELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 580
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 190 VHVRIQQRNGRKTLTTVQGL 249
VHVR+QQRNGRKTLTTVQG+
Sbjct: 498 VHVRVQQRNGRKTLTTVQGI 517
>UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|Rep:
H0303G06.6 protein - Oryza sativa (Rice)
Length = 241
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
G VVE E G+++QLQGD R ++ +L K+G+V+ + +KVHGF
Sbjct: 199 GNVVEDKELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 241
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +1
Query: 130 TFDPFADAI---KSSEDDVQDGLVHVRIQQRNGRKTLTTVQGL 249
TFD FADA ++ VHVR+QQRNGRKTLTTVQG+
Sbjct: 136 TFDAFADAEGEDAAAGRGAGGDYVHVRVQQRNGRKTLTTVQGI 178
>UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2;
Cryptosporidium|Rep: Translation initiation factor SUI1
- Cryptosporidium hominis
Length = 112
Score = 52.0 bits (119), Expect = 1e-05
Identities = 17/42 (40%), Positives = 31/42 (73%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 433
GT+++ PE+G +LQ+QGD R N+ ++L +V +++K+HG
Sbjct: 70 GTIIDDPEHGPILQIQGDHRHNVARFLVGENIVNSDEIKIHG 111
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1
Query: 139 PFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSNMT*RR 273
PF S G VH+R QQRNG+K+LTTVQGLS+ +R
Sbjct: 13 PFVVDALSEVGKSSSGYVHIRNQQRNGKKSLTTVQGLSAEFDLKR 57
>UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation factor
1; n=9; Apicomplexa|Rep: Eukaryotic translation
initiation factor 1 - Toxoplasma gondii
Length = 163
Score = 50.8 bits (116), Expect = 3e-05
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 433
GTV+E PE+G ++QLQGDQR + ++L + + +Q+++HG
Sbjct: 121 GTVIEDPEHGSIIQLQGDQRHAVKEFLEREAICSVDQIRIHG 162
Score = 39.9 bits (89), Expect = 0.059
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIKS------SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSNM 261
+ IQN DPFA+ S + L ++R QQRNGRK++TTVQGL ++
Sbjct: 48 LDIQNFGVSDPFANDTSQAGGAGGSSTHLIRKLRNIRNQQRNGRKSVTTVQGLDKSL 104
>UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating
factor DNA sequence; n=1; Nicotiana tabacum|Rep:
Nicotiana tabacum (clone 12) activating factor DNA
sequence - Nicotiana tabacum (Common tobacco)
Length = 81
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 246
+ +Q + FDPFA+A S ++ VH+RIQQRNG+K+LTTVQG
Sbjct: 35 IDVQIPSAFDPFAEAKDSGAPGAKE-YVHIRIQQRNGKKSLTTVQG 79
>UniRef50_Q00T99 Cluster: Translation initiation factor SUI1,
putative; n=1; Ostreococcus tauri|Rep: Translation
initiation factor SUI1, putative - Ostreococcus tauri
Length = 129
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 433
G +VE E+G+++QLQGDQR+NI Q+L + K +KVHG
Sbjct: 86 GCIVEDSEHGDIVQLQGDQRKNIAQFLVDERISKKALIKVHG 127
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +1
Query: 169 DDVQDGLVHVRIQQRNGRKTLTTVQGLS 252
D VQ +H+R+QQRNGRK+LTTVQGL+
Sbjct: 39 DSVQGNYIHIRMQQRNGRKSLTTVQGLN 66
>UniRef50_Q86AU4 Cluster: Similar to translation initiation factor 3
(EIF3); Sui1p; n=2; Dictyostelium discoideum|Rep:
Similar to translation initiation factor 3 (EIF3); Sui1p
- Dictyostelium discoideum (Slime mold)
Length = 110
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSNMT*RRSCGH 285
SIQNLN+ DPFA+ D VH+RI QR+GRK +TTV+GL + ++ H
Sbjct: 3 SIQNLNSADPFAEDSNLGGDS-GISYVHIRIFQRSGRKAVTTVEGLPPKIDLKKILKH 59
Score = 41.1 bits (92), Expect = 0.025
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +2
Query: 284 MQEGVRVQGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
+++ + G +VE G +++LQGD+R+ I +L + + + +K+HGF
Sbjct: 60 LKKSLNCNGNIVEEENLGMIIKLQGDKRKEIALFLIEEKISQKPSIKIHGF 110
>UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations,
putative; n=1; Filobasidiella neoformans|Rep: Suppressor
of initiator codon mutations, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 159
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 8/55 (14%)
Frame = +1
Query: 115 IQNLN-TFDPFADA-----IKSSEDDV--QDGLVHVRIQQRNGRKTLTTVQGLSS 255
++NL FDPFA S E V ++ +H+R+QQRNGRKTLTTVQG+ S
Sbjct: 26 VENLGPAFDPFAPVNDLNDTPSIEKAVGSKNDKIHIRLQQRNGRKTLTTVQGIPS 80
Score = 35.9 bits (79), Expect = 0.96
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = +2
Query: 332 YGEVLQLQGDQRENICQWLTKSGLVKPEQLK----VHGF 436
+G+VLQLQGDQR Q+L SG+V ++ K VHG+
Sbjct: 121 HGDVLQLQGDQRVAAKQFLIDSGIVAQKEAKDLIVVHGY 159
>UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;
Trypanosomatidae|Rep: Translation factor SUI1, putative
- Leishmania major
Length = 107
Score = 39.9 bits (89), Expect = 0.059
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 NTFDPFADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTVQGLSSNMT*RR 273
+T + + + +E V G VH+R+QQR G+K +TTVQGL+ + RR
Sbjct: 3 DTVEAIVNQQRETERAVLGGQKVHIRVQQRKGKKFVTTVQGLNQKLNFRR 52
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVH 430
GTV+ P+ G V+QLQG+ ENI Q+L + L++H
Sbjct: 65 GTVISTPDAGTVIQLQGNWSENIKQFLLDEHMATENNLEIH 105
>UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 165
Score = 39.1 bits (87), Expect = 0.10
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = +2
Query: 311 TVVEHPEYGEVLQLQGDQRENICQWL-TKSGL-VKPEQLKVHG 433
++VE +GEV+Q+QGD R+ I ++L TK GL + E + VHG
Sbjct: 123 SIVEDKVFGEVIQIQGDYRQKIYEFLTTKDGLELDEENVVVHG 165
>UniRef50_UPI000150A7AF Cluster: Translation initiation factor SUI1
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor SUI1 family protein -
Tetrahymena thermophila SB210
Length = 101
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 311 TVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 433
T+VE E +V++L GD R I Q+L++ G+ + + +HG
Sbjct: 60 TIVEEDEGKKVIKLNGDHRNQIQQFLSEEGIAAVDNITIHG 100
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 169 DDVQDGLVHVRIQQRNGRKTLTTVQGL 249
DD Q +H+R++QR GRK TTV+G+
Sbjct: 13 DDFQTH-IHIRVEQRRGRKCFTTVEGI 38
>UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Translation
initiation factor - Entamoeba histolytica HM-1:IMSS
Length = 110
Score = 35.9 bits (79), Expect = 0.96
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 187 LVHVRIQQRNGRKTLTTVQGL 249
+VH RIQQRNGRK +TT+ G+
Sbjct: 27 IVHFRIQQRNGRKCVTTITGI 47
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 335 GEV-LQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GEV +L GDQR+ + G++ PE +K+HGF
Sbjct: 76 GEVEFKLSGDQRKAASNFFLAEGILLPENIKIHGF 110
>UniRef50_Q01DM1 Cluster: Transducin / WD-40 repeat protein-like;
n=2; Ostreococcus|Rep: Transducin / WD-40 repeat
protein-like - Ostreococcus tauri
Length = 1073
Score = 35.5 bits (78), Expect = 1.3
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = -1
Query: 391 GEPLANILSLVAL--KLQHLAVLRVLHDRTLHANSFLHARTIFFRSYSRKGLAP*SASYA 218
G+ +AN++ ++ L K + VLR T H H R R +R+GLAP S
Sbjct: 33 GDDVANLVVVLVLVEKAREFIVLRA--GFTAHDRLIAHDRPASERHRARRGLAPAHDSRR 90
Query: 217 RFVAGYGRGLNHLERRPPS 161
R G+ RG RRPP+
Sbjct: 91 R-TQGHTRGAPQTPRRPPT 108
>UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +2
Query: 308 GTVVEHPEYGE--VLQLQGDQRENICQWLTKSGLVKPEQLKVHG 433
G + + +YG+ ++L GD R+ I ++L + G+ + +KVHG
Sbjct: 63 GIISKDEDYGDQVTIRLTGDNRQQIAKFLVEEGIALQDNIKVHG 106
>UniRef50_Q9X1T8 Cluster: Transcriptional regulator, biotin
repressor family; n=4; Thermotogaceae|Rep:
Transcriptional regulator, biotin repressor family -
Thermotoga maritima
Length = 175
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 VSSNETGVRR*LRCKAFPRI*PEEDRAGMQEGVRVQGTVVEHPEYGEVLQ-LQGDQRENI 376
++ ++GV R + K P EE ++ G R+ +VEHP YGE+ + E +
Sbjct: 64 LAGGKSGVSRLVAVKHAPEEIKEELLCVVRNGGRIVDVIVEHPVYGEIRGIIDVSSEEEV 123
Query: 377 CQWLTKSGLVKPEQL 421
+++ + K E L
Sbjct: 124 LKFVNLMEMAKTEPL 138
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,594,209
Number of Sequences: 1657284
Number of extensions: 12807491
Number of successful extensions: 34152
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 32720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34126
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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