Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00026
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein. 81 5e-15
BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation ... 81 5e-15
AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1... 81 5e-15
AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eI... 81 5e-15
AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein. 81 5e-15
L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein. 79 2e-14
CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein. 79 2e-14
BT006645-1|AAP35291.1| 113|Homo sapiens putative translation in... 79 2e-14
BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation ... 79 2e-14
BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation ... 79 2e-14
AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein. 79 2e-14
AF100737-1|AAD19900.1| 113|Homo sapiens putative translation in... 79 2e-14
AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein. 79 2e-14
BC085196-1|AAH85196.1| 257|Homo sapiens MAPK13 protein protein. 30 9.1
AB209586-1|BAD92823.1| 255|Homo sapiens mitogen-activated prote... 30 9.1
>CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation
initiation factor 1B protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1
homolog protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eIF-1
protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 60.9 bits (141), Expect = 4e-09
Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSEDDVQDGL---VHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL +FDPFADA K +D + GL +H+RIQQRNG KTLTTVQG++ +
Sbjct: 3 TIQNLQSFDPFADATKG-DDLLPAGLEDYIHIRIQQRNGGKTLTTVQGIADD 53
>L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>BT006645-1|AAP35291.1| 113|Homo sapiens putative translation
initiation factor protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>AF100737-1|AAD19900.1| 113|Homo sapiens putative translation
initiation factor A121/Sui1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + VH+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYVHIRIQQRNGRKTLTTVQGIADD 53
>AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 308 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 436
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>BC085196-1|AAH85196.1| 257|Homo sapiens MAPK13 protein protein.
Length = 257
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 345 STSPYSGCSTTVPCTRTPSCMPARSSSGHIRGKA 244
+T P G + VP + P C PA +G RG+A
Sbjct: 212 ATDPQEGFHSAVPTGQPPGCGPAGEDAGARRGQA 245
>AB209586-1|BAD92823.1| 255|Homo sapiens mitogen-activated protein
kinase 13 variant protein.
Length = 255
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 345 STSPYSGCSTTVPCTRTPSCMPARSSSGHIRGKA 244
+T P G + VP + P C PA +G RG+A
Sbjct: 210 ATDPQEGFHSAVPTGQPPGCGPAGEDAGARRGQA 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,084,148
Number of Sequences: 237096
Number of extensions: 1876250
Number of successful extensions: 4746
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4732
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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