Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00025
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...   135   2e-33
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   4.5  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   4.5  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   4.5  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        24   6.0  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        24   6.0  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   7.9  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score =  135 bits (326), Expect = 2e-33
 Identities = 59/61 (96%), Positives = 60/61 (98%)
 Frame = +3

Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
           EYDLKKIVRACKKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTKSGL KPEQLKVHG
Sbjct: 50  EYDLKKIVRACKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHG 109

Query: 435 F 437
           F
Sbjct: 110 F 110



 Score = 93.5 bits (222), Expect = 7e-21
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = +1

Query: 109 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSS 255
           MSIQNLNTFDPFADAIK ++ DVQDGLVH+RIQQRNGRKTLTTVQGLS+
Sbjct: 1   MSIQNLNTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSA 49


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 681 IVNIPNSLFLFLYDIVFLN 737
           ++NI  SLFLFL ++ F N
Sbjct: 468 VMNINGSLFLFLTNMTFQN 486


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 681 IVNIPNSLFLFLYDIVFLN 737
           ++NI  SLFLFL ++ F N
Sbjct: 468 VMNINGSLFLFLTNMTFQN 486


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 681 IVNIPNSLFLFLYDIVFLN 737
           ++NI  SLFLFL ++ F N
Sbjct: 446 VMNINGSLFLFLTNMTFQN 464


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 568 GC-PRPVPCDFLCCIKYCKSYILSPPSRL 651
           GC P+P+P     CI  C SYI    S++
Sbjct: 52  GCVPKPIPS--FACIGRCASYIQVSGSKI 78


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 568 GC-PRPVPCDFLCCIKYCKSYILSPPSRL 651
           GC P+P+P     CI  C SYI    S++
Sbjct: 52  GCVPKPIPS--FACIGRCASYIQVSGSKI 78


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 261 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQL 422
           DL ++V +  ++F C   V+  PE  E+L LQ  +   I  WLT+    +  Q+
Sbjct: 532 DLMQMVSSQMQQFLCLQNVLLEPETDELL-LQFYEASAI--WLTQLSAREASQI 582


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,569
Number of Sequences: 2352
Number of extensions: 15437
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)