Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00023
         (679 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D564FA Cluster: PREDICTED: similar to CG13760-PB...    39   0.13 
UniRef50_Q7PSP3 Cluster: ENSANGP00000011200; n=2; Culicidae|Rep:...    37   0.52 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    35   1.6  
UniRef50_UPI0000587548 Cluster: PREDICTED: hypothetical protein;...    34   3.7  
UniRef50_Q1FHG3 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;...    34   3.7  
UniRef50_A6CLU5 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_A5DFW8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_UPI0000D564FA Cluster: PREDICTED: similar to CG13760-PB;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG13760-PB - Tribolium castaneum
          Length = 228

 Score = 38.7 bits (86), Expect = 0.13
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = -1

Query: 499 GPAIVLVDAGLLSCDLCKHNKLGSE 425
           GP IVL +A LL+CD+CK NK+ SE
Sbjct: 139 GPVIVLTNARLLNCDVCKLNKISSE 163



 Score = 33.5 bits (73), Expect = 4.8
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 636 SSYLLSFVIQDTQRVYSRFRDALDSGVQAVERSVSMKELVSHLLIGARL*YLWMRVC-CR 460
           +S+  + + +D  RV  RF  A  SGV     S+SM+ ++ HL+ G  +     R+  C 
Sbjct: 94  NSFYHNILTKDEFRVNQRFETAKASGVLVERASISMQTILDHLINGPVIVLTNARLLNCD 153

Query: 459 ATCANTISSAL 427
               N ISS L
Sbjct: 154 VCKLNKISSEL 164


>UniRef50_Q7PSP3 Cluster: ENSANGP00000011200; n=2; Culicidae|Rep:
           ENSANGP00000011200 - Anopheles gambiae str. PEST
          Length = 222

 Score = 36.7 bits (81), Expect = 0.52
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = -1

Query: 499 GPAIVLVDAGLLSCDLCKHNKLGSEQ*VGTHF--LCKVNRYSGSIHISAPQTSLRILPIP 326
           G  I+L+ A LL CDLCK NKL  E     H+  LC  N+         P    R+  IP
Sbjct: 138 GNIILLISASLLYCDLCKFNKLPCEIRYMGHYIVLCGYNKKLQKFMYRNPACKDRVCYIP 197


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -3

Query: 356 PN-VITDPPDPLTVLLGTTSTGHXXXXXXXXXXRADE*INPQTQPTEFLAG 207
           PN V++DP D L+VLL  +STG+                NP+TQP +FLAG
Sbjct: 37  PNHVLSDPRDSLSVLLDLSSTGYCPCRVRRA-------TNPKTQPMKFLAG 80


>UniRef50_UPI0000587548 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 164

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -1

Query: 496 PAIVLVDAGLLSCDLCKHNKLGSEQ 422
           PAIVL+DA +L C +C+  ++G E+
Sbjct: 136 PAIVLIDASILHCQMCEGTRVGREK 160


>UniRef50_Q1FHG3 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;
           n=1; Clostridium phytofermentans ISDg|Rep: 4Fe-4S
           ferredoxin, iron-sulfur binding - Clostridium
           phytofermentans ISDg
          Length = 749

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -1

Query: 562 GCTGCRAICLYEGAGLPPTDRGPAIVLVDAG-LLSCDLCK 446
           GCT CR +C Y    + P + G    +VD    + C LCK
Sbjct: 304 GCTACREVCPYNAIEMKPDEEGFIYPVVDHDKCVKCMLCK 343


>UniRef50_A6CLU5 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. SG-1|Rep: Putative uncharacterized protein
           - Bacillus sp. SG-1
          Length = 71

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 345 NDVWGAEI*ILPL-YRFTLHKKCVPTYCSEPSLLCLHKSHDNRPASTSTIAGPRSVGGRP 521
           +  W AE+  LPL Y   +H K VP    EP+   L K HD    +++  A P SV  R 
Sbjct: 11  SSAWKAEV--LPLNYTRNIHMKLVPVAGVEPA---LQKEHDFESCASANSATPASVDWRR 65

Query: 522 AP 527
            P
Sbjct: 66  QP 67


>UniRef50_A5DFW8 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 1076

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 63  SDSLEKL---YQLLVDVLTHGAQTRSVANTSPSKSSASQNLPLDR-KRDSLRSGEKLSGL 230
           SD LE L   Y  +VD +   A  R+  NT+ +K S +   P+   +R SL  GEK   L
Sbjct: 493 SDLLENLCSRYPFIVDHMRQTANERNALNTTSTKLSLNMTTPIQSPRRLSLVQGEKTPAL 552

Query: 231 CL 236
            +
Sbjct: 553 AI 554


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,143,134
Number of Sequences: 1657284
Number of extensions: 13563480
Number of successful extensions: 36395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36385
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)