Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00021
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.52 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.2  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   1.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 267 FCSSCEPAPASVLNTGSRLETRPP 196
           F SSC+P P ++   GSR    PP
Sbjct: 75  FSSSCDPVPGNLEQIGSR-PLHPP 97



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 361 RLRADAEGAAHPRRREVLRG 420
           +L  DA+GA  P RRE  RG
Sbjct: 303 KLDEDADGAVSPLRREKDRG 322


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 254 QDEQKSAALRAHLGRID 304
           Q+EQ  + +RAHL R+D
Sbjct: 498 QEEQTQSRVRAHLKRLD 514


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 93  PILIDNGLAILENEKIERHIMKSVP 167
           PI +D+G+ IL++ K E   + S+P
Sbjct: 341 PIQLDDGIDILDDVKCEDERVISIP 365


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 552 FQCLLEFVVVNDVL 511
           FQC+ +F  +ND+L
Sbjct: 120 FQCITKFKTINDIL 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,669
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)