Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00020
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L12760-1|AAA02558.1| 622|Homo sapiens phosphoenolpyruvate carbo... 144 2e-34
L05144-1|AAA60084.1| 622|Homo sapiens phosphoenolpyruvate carbo... 144 2e-34
BC023978-1|AAH23978.1| 622|Homo sapiens phosphoenolpyruvate car... 144 2e-34
AY794987-1|AAV50001.1| 622|Homo sapiens phosphoenolpyruvate car... 144 2e-34
AL035541-3|CAB55863.1| 622|Homo sapiens phosphoenolpyruvate car... 144 2e-34
CR456913-1|CAG33194.1| 640|Homo sapiens PCK2 protein. 143 7e-34
BC001454-1|AAH01454.1| 640|Homo sapiens phosphoenolpyruvate car... 143 7e-34
Y11484-1|CAA72272.1| 640|Homo sapiens phosphoenolpyruvate carbo... 142 1e-33
X92720-1|CAA63380.1| 640|Homo sapiens phosphoenolpyruvate carbo... 142 1e-33
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 31 4.2
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 31 4.2
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 31 4.2
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 31 4.2
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 31 4.2
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 31 4.2
BC071592-1|AAH71592.1| 1076|Homo sapiens FARP1 protein protein. 30 7.3
BC041595-1|AAH41595.1| 1045|Homo sapiens FERM, RhoGEF (ARHGEF) a... 30 7.3
BC019826-1|AAH19826.1| 183|Homo sapiens COMM domain containing ... 30 7.3
BC015145-1|AAH15145.1| 183|Homo sapiens COMM domain containing ... 30 7.3
BC008371-1|AAH08371.1| 183|Homo sapiens COMM domain containing ... 30 7.3
AY542163-1|AAS22245.1| 183|Homo sapiens COMMD8 protein. 30 7.3
AL161896-1|CAI12946.1| 1045|Homo sapiens FERM, RhoGEF (ARHGEF) a... 30 7.3
AL137249-8|CAI39458.1| 1045|Homo sapiens FERM, RhoGEF (ARHGEF) a... 30 7.3
AL137249-1|CAI39451.1| 183|Homo sapiens FERM, RhoGEF (ARHGEF) a... 30 7.3
AL136300-3|CAI10953.1| 1045|Homo sapiens FERM, RhoGEF (ARHGEF) a... 30 7.3
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 30 7.3
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 30 7.3
AK000509-1|BAA91216.1| 183|Homo sapiens protein ( Homo sapiens ... 30 7.3
AB008430-1|BAA24267.1| 1045|Homo sapiens CDEP protein. 30 7.3
>L12760-1|AAA02558.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase protein.
Length = 622
Score = 144 bits (350), Expect = 2e-34
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P+ID WE+ EGVPI I+ GGRRPAGVPLV E W +GVF+G +MRSEATAAAEH GK
Sbjct: 414 PIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWL 255
++MHDPFAM PFFGYNFG YL HWL
Sbjct: 474 IIMHDPFAMRPFFGYNFGKYLAHWL 498
Score = 120 bits (290), Expect = 4e-27
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SMPQ-PGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYI 431
SM Q P +PKIFHVNWFRKD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYI
Sbjct: 499 SMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYI 558
Query: 432 PRAGALNTENLSAVDMNELFSIPKDF 509
P+ ALN + L ++M ELFSI K+F
Sbjct: 559 PKEDALNLKGLGHINMMELFSISKEF 584
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W +E + IEKY +++V DLP E+ E+ L++ I
Sbjct: 585 WEKEVEDIEKYLEDQVNADLPCEIEREILALKQRI 619
>L05144-1|AAA60084.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase protein.
Length = 622
Score = 144 bits (350), Expect = 2e-34
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P+ID WE+ EGVPI I+ GGRRPAGVPLV E W +GVF+G +MRSEATAAAEH GK
Sbjct: 414 PIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWL 255
++MHDPFAM PFFGYNFG YL HWL
Sbjct: 474 IIMHDPFAMRPFFGYNFGKYLAHWL 498
Score = 120 bits (290), Expect = 4e-27
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SMPQ-PGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYI 431
SM Q P +PKIFHVNWFRKD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYI
Sbjct: 499 SMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTNVTPIGYI 558
Query: 432 PRAGALNTENLSAVDMNELFSIPKDF 509
P+ ALN + L ++M ELFSI K+F
Sbjct: 559 PKEDALNLKGLGHINMMELFSISKEF 584
Score = 30.7 bits (66), Expect = 5.5
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W +E + IEKY ++V DLP E+ E+ L++ I
Sbjct: 585 WDKEVEDIEKYLVDQVNADLPCEIEREILALKQRI 619
>BC023978-1|AAH23978.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 144 bits (350), Expect = 2e-34
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P+ID WE+ EGVPI I+ GGRRPAGVPLV E W +GVF+G +MRSEATAAAEH GK
Sbjct: 414 PIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWL 255
++MHDPFAM PFFGYNFG YL HWL
Sbjct: 474 IIMHDPFAMRPFFGYNFGKYLAHWL 498
Score = 120 bits (290), Expect = 4e-27
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SMPQ-PGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYI 431
SM Q P +PKIFHVNWFRKD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYI
Sbjct: 499 SMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYI 558
Query: 432 PRAGALNTENLSAVDMNELFSIPKDF 509
P+ ALN + L ++M ELFSI K+F
Sbjct: 559 PKEDALNLKGLGHINMMELFSISKEF 584
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W +E + IEKY +++V DLP E+ E+ L++ I
Sbjct: 585 WEKEVEDIEKYLEDQVNADLPCEIEREILALKQRI 619
>AY794987-1|AAV50001.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 144 bits (350), Expect = 2e-34
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P+ID WE+ EGVPI I+ GGRRPAGVPLV E W +GVF+G +MRSEATAAAEH GK
Sbjct: 414 PIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWL 255
++MHDPFAM PFFGYNFG YL HWL
Sbjct: 474 IIMHDPFAMRPFFGYNFGKYLAHWL 498
Score = 120 bits (290), Expect = 4e-27
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SMPQ-PGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYI 431
SM Q P +PKIFHVNWFRKD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYI
Sbjct: 499 SMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYI 558
Query: 432 PRAGALNTENLSAVDMNELFSIPKDF 509
P+ ALN + L ++M ELFSI K+F
Sbjct: 559 PKEDALNLKGLGHINMMELFSISKEF 584
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W +E + IEKY +++V DLP E+ E+ L++ I
Sbjct: 585 WEKEVEDIEKYLEDQVNADLPCEIEREILALKQRI 619
>AL035541-3|CAB55863.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 144 bits (350), Expect = 2e-34
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P+ID WE+ EGVPI I+ GGRRPAGVPLV E W +GVF+G +MRSEATAAAEH GK
Sbjct: 414 PIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWL 255
++MHDPFAM PFFGYNFG YL HWL
Sbjct: 474 IIMHDPFAMRPFFGYNFGKYLAHWL 498
Score = 120 bits (290), Expect = 4e-27
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SMPQ-PGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYI 431
SM Q P +PKIFHVNWFRKD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYI
Sbjct: 499 SMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYI 558
Query: 432 PRAGALNTENLSAVDMNELFSIPKDF 509
P+ ALN + L ++M ELFSI K+F
Sbjct: 559 PKEDALNLKGLGHINMMELFSISKEF 584
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W +E + IEKY +++V DLP E+ E+ L++ I
Sbjct: 585 WEKEVEDIEKYLEDQVNADLPCEIEREILALKQRI 619
>CR456913-1|CAG33194.1| 640|Homo sapiens PCK2 protein.
Length = 640
Score = 143 bits (346), Expect = 7e-34
Identities = 63/97 (64%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P++D WE EGVPI AI+ GGRRP GVPLV E +W +GVF+G++MRSE+TAAAEH GK
Sbjct: 432 PIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVYEAFNWRHGVFVGSAMRSESTAAAEHKGK 491
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWLRCRSR-DATCPR 288
++MHDPFAM PFFGYNFG YL+HWL R A PR
Sbjct: 492 IIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPR 528
Score = 120 bits (288), Expect = 7e-27
Identities = 51/90 (56%), Positives = 65/90 (72%)
Frame = +3
Query: 270 GRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGAL 449
G +P+IFHVNWFR+DE G FLW GFGEN+RVLDWI RR +GE ETP+G +P+ GAL
Sbjct: 523 GAQLPRIFHVNWFRRDEAGHFLWLGFGENARVLDWICRRLEGEDSARETPIGLVPKEGAL 582
Query: 450 NTENLSAVDMNELFSIPKDFGCRSLTPSRS 539
+ L A+D +LFS+PKDF + + RS
Sbjct: 583 DLSGLRAIDTTQLFSLPKDFWEQEVRDIRS 612
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W QE I Y E+V +DLP E+ EL L + +
Sbjct: 603 WEQEVRDIRSYLTEQVNQDLPKEVLAELEALERRV 637
>BC001454-1|AAH01454.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase 2 (mitochondrial) protein.
Length = 640
Score = 143 bits (346), Expect = 7e-34
Identities = 63/97 (64%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P++D WE EGVPI AI+ GGRRP GVPLV E +W +GVF+G++MRSE+TAAAEH GK
Sbjct: 432 PIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVYEAFNWRHGVFVGSAMRSESTAAAEHKGK 491
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWLRCRSR-DATCPR 288
++MHDPFAM PFFGYNFG YL+HWL R A PR
Sbjct: 492 IIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPR 528
Score = 124 bits (298), Expect = 4e-28
Identities = 52/90 (57%), Positives = 66/90 (73%)
Frame = +3
Query: 270 GRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGAL 449
G +P+IFHVNWFR+DE G FLWPGFGEN+RVLDWI RR +GE ETP+G +P+ GAL
Sbjct: 523 GAQLPRIFHVNWFRRDEAGHFLWPGFGENARVLDWICRRLEGEDSARETPIGLVPKEGAL 582
Query: 450 NTENLSAVDMNELFSIPKDFGCRSLTPSRS 539
+ L A+D +LFS+PKDF + + RS
Sbjct: 583 DLSGLRAIDTTQLFSLPKDFWEQEVRDIRS 612
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W QE I Y E+V +DLP E+ EL L + +
Sbjct: 603 WEQEVRDIRSYLTEQVNQDLPKEVLAELEALERRV 637
>Y11484-1|CAA72272.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase (GTP) protein.
Length = 640
Score = 142 bits (344), Expect = 1e-33
Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P++D WE EGVPI AI+ GGRRP GVPLV E +W +GVF+G +MRSE+TAAAEH GK
Sbjct: 432 PIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVYEAFNWRHGVFVGRAMRSESTAAAEHKGK 491
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWLRCRSR-DATCPR 288
++MHDPFAM PFFGYNFG YL+HWL R A PR
Sbjct: 492 IIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPR 528
Score = 124 bits (298), Expect = 4e-28
Identities = 52/90 (57%), Positives = 66/90 (73%)
Frame = +3
Query: 270 GRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGAL 449
G +P+IFHVNWFR+DE G FLWPGFGEN+RVLDWI RR +GE ETP+G +P+ GAL
Sbjct: 523 GAQLPRIFHVNWFRRDEAGHFLWPGFGENARVLDWICRRLEGEDSARETPIGLVPKEGAL 582
Query: 450 NTENLSAVDMNELFSIPKDFGCRSLTPSRS 539
+ L A+D +LFS+PKDF + + RS
Sbjct: 583 DLSGLRAIDTTQLFSLPKDFWEQEVRDIRS 612
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W QE I Y E+V +DLP E+ EL L + +
Sbjct: 603 WEQEVRDIRSYLTEQVNQDLPKEVLAELEALERRV 637
>X92720-1|CAA63380.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase (GTP) protein.
Length = 640
Score = 142 bits (344), Expect = 1e-33
Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 PMIDGEWENSEGVPISAILLGGRRPAGVPLVVEXRDWXYGVFMGTSMRSEATAAAEHSGK 180
P++D WE EGVPI AI+ GGRRP GVPLV E +W +GVF+G +MRSE+TAAAEH GK
Sbjct: 432 PIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVYEAFNWRHGVFVGRAMRSESTAAAEHKGK 491
Query: 181 MVMHDPFAMSPFFGYNFGDYLKHWLRCRSR-DATCPR 288
++MHDPFAM PFFGYNFG YL+HWL R A PR
Sbjct: 492 IIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPR 528
Score = 124 bits (298), Expect = 4e-28
Identities = 52/90 (57%), Positives = 66/90 (73%)
Frame = +3
Query: 270 GRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGAL 449
G +P+IFHVNWFR+DE G FLWPGFGEN+RVLDWI RR +GE ETP+G +P+ GAL
Sbjct: 523 GAQLPRIFHVNWFRRDEAGHFLWPGFGENARVLDWICRRLEGEDSARETPIGLVPKEGAL 582
Query: 450 NTENLSAVDMNELFSIPKDFGCRSLTPSRS 539
+ L A+D +LFS+PKDF + + RS
Sbjct: 583 DLSGLRAIDTTQLFSLPKDFWEQEVRDIRS 612
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 613
W QE I Y E+V +DLP E+ EL L + +
Sbjct: 603 WEQEVRDIRSYLTEQVNQDLPKEVLAELEALERRV 637
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 RCRSRDATCPRSSTSTGSVKMNRVSSSGPXSARTLGS*TGSCVAATGSPATPR 414
R RS + SSTSTGS + SS+ S + S + S +++GSP+ R
Sbjct: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSR 128
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 RCRSRDATCPRSSTSTGSVKMNRVSSSGPXSARTLGS*TGSCVAATGSPATPR 414
R RS + SSTSTGS + SS+ S + S + S +++GSP+ R
Sbjct: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSR 128
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 RCRSRDATCPRSSTSTGSVKMNRVSSSGPXSARTLGS*TGSCVAATGSPATPR 414
R RS + SSTSTGS + SS+ S + S + S +++GSP+ R
Sbjct: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSR 128
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 RCRSRDATCPRSSTSTGSVKMNRVSSSGPXSARTLGS*TGSCVAATGSPATPR 414
R RS + SSTSTGS + SS+ S + S + S +++GSP+ R
Sbjct: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSR 128
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 RCRSRDATCPRSSTSTGSVKMNRVSSSGPXSARTLGS*TGSCVAATGSPATPR 414
R RS + SSTSTGS + SS+ S + S + S +++GSP+ R
Sbjct: 53 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSR 105
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 RCRSRDATCPRSSTSTGSVKMNRVSSSGPXSARTLGS*TGSCVAATGSPATPR 414
R RS + SSTSTGS + SS+ S + S + S +++GSP+ R
Sbjct: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSR 128
>BC071592-1|AAH71592.1| 1076|Homo sapiens FARP1 protein protein.
Length = 1076
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 237 LPEALASMPQPGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDW 374
+PEAL S+ P FH N+ ++ EQ LW G N+++ D+
Sbjct: 576 MPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEG-RSNAQIRDY 620
>BC041595-1|AAH41595.1| 1045|Homo sapiens FERM, RhoGEF (ARHGEF) and
pleckstrin domain protein 1 (chondrocyte-derived)
protein.
Length = 1045
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 237 LPEALASMPQPGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDW 374
+PEAL S+ P FH N+ ++ EQ LW G N+++ D+
Sbjct: 576 MPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEG-RSNAQIRDY 620
>BC019826-1|AAH19826.1| 183|Homo sapiens COMM domain containing 8
protein.
Length = 183
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPN-EMWDELNKLRKNIQAQALN*TKDIK 649
W+ + I K+FK VG++LP+ E++ +LN+L Q + K K
Sbjct: 51 WMHVLEDIAKFFKAIVGKNLPDEEIFQQLNQLNSLHQETIMKCVKSRK 98
>BC015145-1|AAH15145.1| 183|Homo sapiens COMM domain containing 8
protein.
Length = 183
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPN-EMWDELNKLRKNIQAQALN*TKDIK 649
W+ + I K+FK VG++LP+ E++ +LN+L Q + K K
Sbjct: 51 WMHVLEDIAKFFKAIVGKNLPDEEIFQQLNQLNSLHQETIMKCVKSRK 98
>BC008371-1|AAH08371.1| 183|Homo sapiens COMM domain containing 8
protein.
Length = 183
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPN-EMWDELNKLRKNIQAQALN*TKDIK 649
W+ + I K+FK VG++LP+ E++ +LN+L Q + K K
Sbjct: 51 WMHVLEDIAKFFKAIVGKNLPDEEIFQQLNQLNSLHQETIMKCVKSRK 98
>AY542163-1|AAS22245.1| 183|Homo sapiens COMMD8 protein.
Length = 183
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPN-EMWDELNKLRKNIQAQALN*TKDIK 649
W+ + I K+FK VG++LP+ E++ +LN+L Q + K K
Sbjct: 51 WMHVLEDIAKFFKAIVGKNLPDEEIFQQLNQLNSLHQETIMKCVKSRK 98
>AL161896-1|CAI12946.1| 1045|Homo sapiens FERM, RhoGEF (ARHGEF) and
pleckstrin domain protein 1 (chondrocyte-derived)
protein.
Length = 1045
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 237 LPEALASMPQPGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDW 374
+PEAL S+ P FH N+ ++ EQ LW G N+++ D+
Sbjct: 576 MPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEG-RSNAQIRDY 620
>AL137249-8|CAI39458.1| 1045|Homo sapiens FERM, RhoGEF (ARHGEF) and
pleckstrin domain protein 1 (chondrocyte-derived)
protein.
Length = 1045
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 237 LPEALASMPQPGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDW 374
+PEAL S+ P FH N+ ++ EQ LW G N+++ D+
Sbjct: 576 MPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEG-RSNAQIRDY 620
>AL137249-1|CAI39451.1| 183|Homo sapiens FERM, RhoGEF (ARHGEF) and
pleckstrin domain protein 1 (chondrocyte-derived)
protein.
Length = 183
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 237 LPEALASMPQPGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDW 374
+PEAL S+ P FH N+ ++ EQ LW G N+++ D+
Sbjct: 104 MPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEG-RSNAQIRDY 148
>AL136300-3|CAI10953.1| 1045|Homo sapiens FERM, RhoGEF (ARHGEF) and
pleckstrin domain protein 1 (chondrocyte-derived)
protein.
Length = 1045
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 237 LPEALASMPQPGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDW 374
+PEAL S+ P FH N+ ++ EQ LW G N+++ D+
Sbjct: 576 MPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEG-RSNAQIRDY 620
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 53 SCWAADGRPACRS*WSXGTGXTACSW 130
SC ++ RS WS GT T+CSW
Sbjct: 29 SCRSSGTSSTSRSWWSSGTSSTSCSW 54
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 53 SCWAADGRPACRS*WSXGTGXTACSW 130
SC ++ RS WS GT T+CSW
Sbjct: 29 SCRSSGTSSTSRSWWSSGTSSTSCSW 54
>AK000509-1|BAA91216.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ20502 fis, clone KAT09323. ).
Length = 183
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 509 WLQESDAIEKYFKEEVGEDLPN-EMWDELNKLRKNIQAQALN*TKDIK 649
W+ + I K+FK VG++LP+ E++ +LN+L Q + K K
Sbjct: 51 WMHVLEDIAKFFKAIVGKNLPDEEIFQQLNQLNSLHQETIMKCVKSRK 98
>AB008430-1|BAA24267.1| 1045|Homo sapiens CDEP protein.
Length = 1045
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 237 LPEALASMPQPGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDW 374
+PEAL S+ P FH N+ ++ EQ LW G N+++ D+
Sbjct: 576 MPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEG-RSNAQIRDY 620
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,372,257
Number of Sequences: 237096
Number of extensions: 2365717
Number of successful extensions: 9213
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 8781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9202
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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