Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00019
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 435 INRYLLLVLISHFFYCVY 488
           ++R+L L   S+FFY  Y
Sbjct: 76  MSRFLCLPFYSYFFYLSY 93


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 435 INRYLLLVLISHFFYCVY 488
           ++R+L L   S+FFY  Y
Sbjct: 32  MSRFLCLPFYSYFFYLSY 49


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 15  LHGADRLERSRRVLP 59
           ++  D+LE+ R+VLP
Sbjct: 86  VNNCDKLEKPRKVLP 100


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 429 DVVMN*KPQTIVSTEEK*KQFQLFVLFKSQNHEVLQN 319
           D++ +  PQ ++  EEK        L   ++  VL+N
Sbjct: 116 DIIQDIVPQNVLDEEEKSSTKHYAALLTERSSLVLRN 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,004
Number of Sequences: 336
Number of extensions: 2198
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)