Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00018
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16KY0 Cluster: Cytochrome B561; n=4; Culicidae|Rep: Cy...    42   0.013
UniRef50_Q18997 Cluster: Putative uncharacterized protein; n=1; ...    38   0.28 
UniRef50_Q95SF0 Cluster: GM01209p; n=4; Sophophora|Rep: GM01209p...    35   1.9  
UniRef50_A3WCT5 Cluster: Putative uncharacterized protein; n=4; ...    33   5.9  
UniRef50_UPI00004D5AA7 Cluster: Zinc finger protein 438.; n=5; X...    33   7.8  
UniRef50_A7K907 Cluster: Putative uncharacterized protein z397L;...    33   7.8  
UniRef50_A6SJ65 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q16KY0 Cluster: Cytochrome B561; n=4; Culicidae|Rep:
           Cytochrome B561 - Aedes aegypti (Yellowfever mosquito)
          Length = 923

 Score = 41.9 bits (94), Expect = 0.013
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = +2

Query: 68  SLSPNSSLVRRTIDLNYENKKRANSLKWIAVNGILFAIFIYDLSCKCPGYTSILHYVELG 247
           S S  S LV RT+DL    ++    L W ++N  L ++ ++D+S KCP   S  +Y+E  
Sbjct: 8   SPSLRSPLVDRTLDLKLTARRSRECLVWGSINVGLLSVLLFDISNKCPYSFSQWYYLEYA 67

Query: 248 LA 253
            A
Sbjct: 68  AA 69


>UniRef50_Q18997 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 180

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +2

Query: 200 CKCPGYTSILHYVELGLARYWLLTLSNTHCNCCQDELHLLPSHL 331
           C C G  +   YV  G    W+ T SN  C  CQD   L+P+ L
Sbjct: 42  CSCSGTVA---YVHNGCLEQWVRTTSNIQCTICQDMFELIPAGL 82


>UniRef50_Q95SF0 Cluster: GM01209p; n=4; Sophophora|Rep: GM01209p -
           Drosophila melanogaster (Fruit fly)
          Length = 542

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +2

Query: 71  LSPNSSLVRRTIDLNYENKKRANSLKWIAVNGILFAIFIYDLSCKC 208
           LS N  +V+R++DL  +  +  + LKW ++N +L ++ ++DL   C
Sbjct: 11  LSKNP-VVQRSLDLRLQGAQARHYLKWCSINVVLLSLLLFDLWQAC 55


>UniRef50_A3WCT5 Cluster: Putative uncharacterized protein; n=4;
           Sphingomonadales|Rep: Putative uncharacterized protein -
           Erythrobacter sp. NAP1
          Length = 81

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 152 IAVNGILFAIFIYDLSCKCPGYTSILHYVELGLARYWLLTL 274
           + + GIL A+++ D+    PG+   + YV LG+   WLL L
Sbjct: 20  LIIYGILIAVYLADILATWPGWAQTITYVTLGV--IWLLPL 58


>UniRef50_UPI00004D5AA7 Cluster: Zinc finger protein 438.; n=5;
           Xenopus tropicalis|Rep: Zinc finger protein 438. -
           Xenopus tropicalis
          Length = 773

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +2

Query: 44  CLTSIIEMSLSPNSSLVRRTIDLNYENKKRANSLKWIAV-NGILFAIFIYDLSCKCPGYT 220
           C +S I+ +   N+SLV     L+YE+KK ANS   +AV + ++F   +  +     G  
Sbjct: 209 CSSSPIKFNAEENTSLVENGSLLSYESKKVANSTNSLAVLSQVMFGSPVRVVPSVPKGKL 268

Query: 221 SILHYVEL 244
           +IL Y ++
Sbjct: 269 AILPYSKM 276


>UniRef50_A7K907 Cluster: Putative uncharacterized protein z397L;
           n=1; Chlorella virus ATCV-1|Rep: Putative
           uncharacterized protein z397L - Chlorella virus ATCV-1
          Length = 187

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = +2

Query: 2   QRVVKLNYSHLLI*CLTSIIEMSLSPNSSLVRRTIDLNYENKKRANSLKWIAVNGILFAI 181
           QRV   N+S LL+  L  +  + +       R  +      K+ AN+++W   N ++  I
Sbjct: 23  QRVAVPNFSVLLVWILIHLGHLDIGGYVCKHRNELGHYLVIKRIANAVQWRNKNTVVSII 82

Query: 182 FIYDLSCKCP 211
           F+ DL   CP
Sbjct: 83  FLEDLGSDCP 92


>UniRef50_A6SJ65 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 609

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 239 ELGLARYWLLTLSNTHCNCCQDELHLLPSHLL 334
           +L +A  WL     +H +CCQ+    LPS L+
Sbjct: 111 QLQIANQWLAECLTSHVHCCQNPTEFLPSRLI 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,166,616
Number of Sequences: 1657284
Number of extensions: 10433305
Number of successful extensions: 23235
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23222
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)