Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00018
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 71   LSPNSSLVRRTIDLNYENKKRANSLKWIAV 160
            LS   S  RR +D  Y+    +  L WIAV
Sbjct: 1983 LSAAVSPSRRVVDAGYDVPTLSKYLDWIAV 2012


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 488 VSRACCMREDIDSASTGHASSSFIALELL 402
           V   CC+R D+  +  G      + LELL
Sbjct: 553 VDNDCCIRYDVSLSGLGSDRRLELFLELL 581


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 541 ESEAREAKLEDGVKKEETCLELVAC 467
           + EAR+  ++ G+K     LE+ AC
Sbjct: 180 DEEARDDFIKLGIKLSNDKLEITAC 204


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 116 YENKKRANSLK 148
           +ENKKR N++K
Sbjct: 341 FENKKRKNNIK 351


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 575 SQIHHTHLNG 604
           S IH THLNG
Sbjct: 197 SLIHSTHLNG 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,524
Number of Sequences: 336
Number of extensions: 2651
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)