Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00018
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   4.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.8  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 221 SILHYVELGLARYWLLTLSNTHCNCCQDELHLLPSHLLNRSY*VLVMLIWI 373
           SIL+   + L RYW +T   T+           PS +  R   VL+ ++WI
Sbjct: 133 SILNLCVISLDRYWAITDPFTY-----------PSKMSRRRAAVLIAIVWI 172


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 530 RLTLHIYLLGIDHLPSQIHHTHLNGLRETS 619
           R+++H  LLG D +  +I H+ +   R  S
Sbjct: 415 RMSIHDELLGADLVEHRIRHSQIGISRAMS 444


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 221 SILHYVELGLARYWLLT 271
           SIL+   + L RYW +T
Sbjct: 123 SILNLCAIALDRYWAIT 139


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 221 SILHYVELGLARYWLLT 271
           SIL+   + L RYW +T
Sbjct: 123 SILNLCAIALDRYWAIT 139


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 221 SILHYVELGLARYWLLT 271
           SIL+   + L RYW +T
Sbjct: 123 SILNLCAIALDRYWAIT 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,014
Number of Sequences: 438
Number of extensions: 3010
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)