Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00016
(511 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 105 8e-22
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 83 3e-15
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 81 1e-14
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-12
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 71 2e-11
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 66 3e-10
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 62 9e-09
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 60 3e-08
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 60 4e-08
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 58 2e-07
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 53 3e-06
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 52 1e-05
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 50 4e-05
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 48 1e-04
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 47 3e-04
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 46 5e-04
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 46 5e-04
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 44 0.002
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 44 0.002
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 43 0.004
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 43 0.005
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 41 0.019
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 39 0.057
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 37 0.23
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 37 0.31
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 34 1.6
UniRef50_Q7MT74 Cluster: ThiH protein; n=1; Porphyromonas gingiv... 34 2.2
UniRef50_Q2JJD7 Cluster: Hydrolase, alpha/beta fold family; n=2;... 33 2.8
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 33 2.8
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 33 3.8
UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1; Guill... 33 3.8
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ... 33 5.0
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 33 5.0
UniRef50_A6RK49 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella pneu... 32 8.7
UniRef50_A6PS10 Cluster: Putative uncharacterized protein precur... 32 8.7
UniRef50_Q22BQ6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 105 bits (251), Expect = 8e-22
Identities = 49/57 (85%), Positives = 55/57 (96%)
Frame = +3
Query: 84 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVR 254
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVK 57
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 83.4 bits (197), Expect = 3e-15
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = +3
Query: 84 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNI 56
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 81.4 bits (192), Expect = 1e-14
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = +3
Query: 72 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
S++K+ + A +C YSALIL DDDVAVT EKISTI A VD+EPYWPGLF KALEGINV
Sbjct: 9 SQVKITAIA--SCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINV 64
Query: 252 R 254
+
Sbjct: 65 K 65
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 72.5 bits (170), Expect = 5e-12
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +3
Query: 111 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVR 254
VYSALILVDD VAVT EKISTILKAA +VEPYW LFAKALEGINV+
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVK 80
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/57 (61%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +3
Query: 87 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVR 254
+SK+ELACVY+AL+L DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV+
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVK 57
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 66.5 bits (155), Expect = 3e-10
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +3
Query: 87 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
+S +ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNI 55
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 61.7 bits (143), Expect = 9e-09
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +3
Query: 99 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGI 245
+ C+YSA IL +D V V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +3
Query: 63 LARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 242
++ ++L EL C Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL
Sbjct: 4 VSMNELPQSQVQELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALST 63
Query: 243 INV 251
NV
Sbjct: 64 TNV 66
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +3
Query: 87 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVR 254
+S AELA Y+ALIL D+ + +T +K+ ++ AA V ++EP W LFAKALEG +V+
Sbjct: 1 MSAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVK 57
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +3
Query: 72 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 242
S+L + EL CVYS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G
Sbjct: 7 SELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKG 63
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVR 254
M + E A Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVK 58
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3
Query: 96 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
+E AC Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKV 68
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +3
Query: 99 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVR 254
E A Y+ALIL D +V +T EK+ ++ A V+VE W LFAKALEG +++
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLK 55
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +3
Query: 72 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
++L K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++
Sbjct: 7 AELPECEKQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDI 66
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +3
Query: 93 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 242
K ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 186 AAVDVEPYWPGLFAKALEGINVR 254
A VD+EPYWP LFAKALEGINV+
Sbjct: 6 ANVDIEPYWPALFAKALEGINVK 28
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 46.0 bits (104), Expect = 5e-04
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +3
Query: 87 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRT 257
+S LAC Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V T
Sbjct: 1 MSAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVET 57
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 46.0 bits (104), Expect = 5e-04
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +3
Query: 99 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVR 254
E ACV +A+IL D++ T + +I AA V V+ W LFA LEG NV+
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVK 56
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +3
Query: 96 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
AELACVY+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANV 54
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 102 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALE 239
LAC Y+AL+L D + + E I+ +KAA V V P P +FA+ LE
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLE 51
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 99 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
ELA +AL++ + +T E I+T+L A + VE +WP + AKAL N+
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANI 59
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = +3
Query: 114 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVR 254
++A IL D + +T + + TI KAA +V+ W ++AKALEG +++
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLK 54
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 40.7 bits (91), Expect = 0.019
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 99 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 212
ELACVY+ALIL D D +T + + I+ A+ + + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 39.1 bits (87), Expect = 0.057
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 84 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
M SK +LAC Y+ALIL D + + + KAA VDV FA L+ +++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDI 55
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 37.1 bits (82), Expect = 0.23
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 87 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
++ A+LAC Y+ALIL + I + KAA V+V FA AL +NV
Sbjct: 1 MTTAQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNV 54
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 36.7 bits (81), Expect = 0.31
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 105 ACVYSALILVDDDVAVTGEKISTIL-KAAAVDVEPYWPGLF 224
AC Y+ L+L DD A+T + I+ +L KA +VE Y P L+
Sbjct: 8 ACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLY 48
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 34.3 bits (75), Expect = 1.6
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 111 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
VY+AL+L +T + + +L+AA V+V+ ALEG+N+
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNI 50
>UniRef50_Q7MT74 Cluster: ThiH protein; n=1; Porphyromonas
gingivalis|Rep: ThiH protein - Porphyromonas gingivalis
(Bacteroides gingivalis)
Length = 370
Score = 33.9 bits (74), Expect = 2.2
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = -2
Query: 228 WRTDLANMALHLQPPLSRWW--KFSHQLRQHHHPPG*EQSKHM-----LIQLLTPFLVLN 70
WR D ALHL+ +W KFS L + G + K ++QL+T F +L+
Sbjct: 232 WRVDSVFTALHLRYLEQTYWKSKFSISLPRLRPATGGWEPKDPIDDVGMVQLITAFRLLD 291
Query: 69 VQVAVGLSSRENK 31
V + LS+RE++
Sbjct: 292 KDVEISLSTRESR 304
>UniRef50_Q2JJD7 Cluster: Hydrolase, alpha/beta fold family; n=2;
Synechococcus|Rep: Hydrolase, alpha/beta fold family -
Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 274
Score = 33.5 bits (73), Expect = 2.8
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 264 VIRYGH*CLPRLWRTDLANMALHLQPPLSRWWKFSHQLRQ 145
V RY H P LW + + L PL+RWW + QL Q
Sbjct: 130 VRRYNH-LRPLLWESAWVDWLLRAITPLARWWHWEDQLAQ 168
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 33.5 bits (73), Expect = 2.8
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 111 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 251
VY+ALIL + D + + ++ +L AA VDVE ALE +++
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDI 50
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 33.1 bits (72), Expect = 3.8
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 84 MVSKAELACVYSALILVDDD 143
M S +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1;
Guillardia theta|Rep: Acidic ribosomal protein P1 -
Guillardia theta (Cryptomonas phi)
Length = 104
Score = 33.1 bits (72), Expect = 3.8
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 102 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAK 230
++C+ S LIL ++ + +T + IS +LK + +VE Y+ F +
Sbjct: 10 ISCILSILILKENKIKITKDLISLVLKTSNNNVEDYFLSYFER 52
>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein P1 - Equus caballus
Length = 125
Score = 32.7 bits (71), Expect = 5.0
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 102 LACVYSALILVDDDVAVT 155
LAC+YSALIL DD+V VT
Sbjct: 43 LACIYSALILHDDEVTVT 60
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 32.7 bits (71), Expect = 5.0
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 126 ILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 242
+L + VT E+ ST+ + A+D++ PG+F++ L G
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRG 96
>UniRef50_A6RK49 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 410
Score = 32.3 bits (70), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 227 GEQTWPIWLYIYSRRFQDGGNFLTSYGNIIIHQDESR 117
G QT P W + YS + GG S+G ++H D ++
Sbjct: 67 GSQTSPTWTHPYSLAWSKGGGATKSWGMTLVHIDANQ 103
>UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella
pneumophila|Rep: Expressed protein - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 509
Score = 31.9 bits (69), Expect = 8.7
Identities = 12/53 (22%), Positives = 30/53 (56%)
Frame = +3
Query: 54 LRQLARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 212
L+ + + + S +L Y +L + ++TG+++ + ++A +++EPYW
Sbjct: 374 LKDIVKCTGYLNSSPKLEFCYKTQLLKLETCSITGKELQSAVQATLINLEPYW 426
>UniRef50_A6PS10 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 615
Score = 31.9 bits (69), Expect = 8.7
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 135 DDDVAVTGEKISTILKA-----AAVDVEPYWPGLFAKALEGINVRT*SPTSALEWVLLRP 299
++ A+ G++ + +L A AA+ EP +PG A+ LE I+ T SP + L P
Sbjct: 395 EEQRAILGDRRAKLLAAIVERIAAMQAEPAFPGYMAQLLEAIDFATPSPGHEKQLGKLWP 454
Query: 300 LV 305
LV
Sbjct: 455 LV 456
>UniRef50_Q22BQ6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 191
Score = 31.9 bits (69), Expect = 8.7
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 149 RNW*ENFHHLESGGCRCRAILARSVRQSLGRHQCPYLIT 265
R++ E+F +GGC C I A V +S G+ C YL T
Sbjct: 21 RSYFESFFSTSTGGCSCSGIEA-MVAESEGKRSCVYLDT 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,967,878
Number of Sequences: 1657284
Number of extensions: 7220533
Number of successful extensions: 18398
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 18016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18386
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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