Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00015
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   5.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   5.6  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   5.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.3  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   7.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.3  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 223 VCPSMHKDGTCSIG 182
           + PS++ DGTC  G
Sbjct: 362 ISPSINDDGTCGNG 375


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 223 VCPSMHKDGTCSIG 182
           + PS++ DGTC  G
Sbjct: 363 ISPSINDDGTCGNG 376


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 223 VCPSMHKDGTCSIG 182
           + PS++ DGTC  G
Sbjct: 363 ISPSINDDGTCGNG 376


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 442 SSEAPCDPV 416
           + EAPCDPV
Sbjct: 53  TGEAPCDPV 61


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 85  MRTRQEHECASMSII 41
           M+ ++EH+ ASM+I+
Sbjct: 273 MKWKKEHKMASMNIV 287


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 85  MRTRQEHECASMSII 41
           M+ ++EH+ ASM+I+
Sbjct: 273 MKWKKEHKMASMNIV 287


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 85  MRTRQEHECASMSII 41
           M+ ++EH+ ASM+I+
Sbjct: 273 MKWKKEHKMASMNIV 287


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 85  MRTRQEHECASMSII 41
           M+ ++EH+ ASM+I+
Sbjct: 229 MKWKKEHKMASMNIV 243


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 85  MRTRQEHECASMSII 41
           M+ ++EH+ ASM+I+
Sbjct: 273 MKWKKEHKMASMNIV 287


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 85  MRTRQEHECASMSII 41
           M+ ++EH+ ASM+I+
Sbjct: 61  MKWKKEHKMASMNIV 75


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 85  MRTRQEHECASMSII 41
           M+ ++EH+ ASM+I+
Sbjct: 273 MKWKKEHKMASMNIV 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,344
Number of Sequences: 336
Number of extensions: 2842
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)