Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00013
         (760 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8D221 Cluster: YfiO protein; n=1; Wigglesworthia gloss...    36   1.4  
UniRef50_Q64Q31 Cluster: Putative glycosyltransferase; n=1; Bact...    33   7.7  
UniRef50_A7AVD3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q8D221 Cluster: YfiO protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           YfiO protein - Wigglesworthia glossinidia brevipalpis
          Length = 226

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = +1

Query: 304 IKKTRFLATDIGSSETCNITGELYKNRYVLKKKQFHL*RLVF*SSYKNYFYVCYLNIISN 483
           +K T F+   I + E      ELYKNRY  K K++    L F + Y NY+Y  Y    +N
Sbjct: 23  LKNTNFIQYKIKNEENNLKNNELYKNRY-KKYKRY----LYFINKYNNYYY--YKEAKNN 75

Query: 484 VFSYSFRGQD-QVKETAIL 537
           + +  +  +D +++  +IL
Sbjct: 76  IINLYYTYKDYEIENNSIL 94


>UniRef50_Q64Q31 Cluster: Putative glycosyltransferase; n=1;
           Bacteroides fragilis|Rep: Putative glycosyltransferase -
           Bacteroides fragilis
          Length = 326

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 644 KAYLEHVVSEIRAYVKYLVCYDGYPPQLLLYYSFCVK 754
           K + +  + E + Y KY+  Y G+  +LLL Y +C+K
Sbjct: 239 KLFNQRYIREKKIYQKYIYPYIGWYTKLLLVYQYCIK 275


>UniRef50_A7AVD3 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 241

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -1

Query: 706 IAHKIFDICPNLAYDMFKVSFRIYKFRTTTFGPSVYRVISPARWKIFP 563
           +AH + +IC    + +FKV+ ++YK       P+  R+I   R +IFP
Sbjct: 157 LAHILTEICEEPDFQLFKVTCKVYK-TIIEADPNFIRLILAIRQRIFP 203


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,110,592
Number of Sequences: 1657284
Number of extensions: 14088960
Number of successful extensions: 31148
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31134
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)