Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00013
(760 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 23 2.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.5
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.5
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.5
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 3.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 4.6
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 22 6.1
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 22 6.1
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 22 6.1
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 8.1
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 8.1
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 8.1
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 8.1
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 464 ILILFLTSSVTVFVVRTKSKKLPYYLLCG 550
I+I + +SV F++ S+ +Y+ CG
Sbjct: 503 IIIPVILTSVCYFMIGLNSQGFRFYIACG 531
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 734 IVTVVAGSHHSTQDI*HMPE 675
+ VV HH T DI MP+
Sbjct: 291 LTVVVLNYHHRTADIHEMPQ 310
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 734 IVTVVAGSHHSTQDI*HMPE 675
+ VV HH T DI MP+
Sbjct: 291 LTVVVLNYHHRTADIHEMPQ 310
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 734 IVTVVAGSHHSTQDI*HMPE 675
+ VV HH T DI MP+
Sbjct: 291 LTVVVLNYHHRTADIHEMPQ 310
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 734 IVTVVAGSHHSTQDI*HMPE 675
+ VV HH T DI MP+
Sbjct: 291 LTVVVLNYHHRTADIHEMPQ 310
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 734 IVTVVAGSHHSTQDI*HMPE 675
+ VV HH T DI MP+
Sbjct: 291 LTVVVLNYHHRTADIHEMPQ 310
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +3
Query: 30 GTWLMCCHVLFFIYANF-MFLQV 95
G WL CH LF I + LQV
Sbjct: 665 GFWLFHCHFLFHIVIGMNLVLQV 687
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 30 GTWLMCCHVLFFI 68
G WL CH LF I
Sbjct: 665 GYWLFHCHFLFHI 677
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 546 VGITTKGKIFHRAGD 590
V + KG+IFH GD
Sbjct: 365 VNMLPKGEIFHMGGD 379
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.8 bits (44), Expect = 6.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = -1
Query: 472 Y*DSKRKSS--FYMKIK----KQAVIDEIVFFLIHTGFYIILR*YYM 350
Y DS +SS F K K K +I +VFF+ T +Y++ Y++
Sbjct: 254 YGDSVTRSSLAFLGKAKVRTLKMTIIIVLVFFVCWTPYYVMCIWYWL 300
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.8 bits (44), Expect = 6.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = -1
Query: 472 Y*DSKRKSS--FYMKIK----KQAVIDEIVFFLIHTGFYIILR*YYM 350
Y DS +SS F K K K +I +VFF+ T +Y++ Y++
Sbjct: 254 YGDSVTRSSLAFLGKAKVRTLKMTIIIVLVFFVCWTPYYVMCIWYWL 300
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 306 KKNAIPRYRHWLI 344
++ A P YRHW I
Sbjct: 337 QQGAAPDYRHWQI 349
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 439 YKNYFYVCYLNIISNVFSY 495
Y +Y Y Y +S +F Y
Sbjct: 90 YLSYIYTTYSRKLSGIFKY 108
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 439 YKNYFYVCYLNIISNVFSY 495
Y +Y Y Y +S +F Y
Sbjct: 46 YLSYIYTTYSRKLSGIFKY 64
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 464 ILILFLTSSVTVFVVRTKSKKLPYYLLCG 550
I+I +SV F++ S +Y+ CG
Sbjct: 503 IIIPVTLTSVCYFMIGLNSHGFRFYIACG 531
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,978
Number of Sequences: 336
Number of extensions: 4257
Number of successful extensions: 35
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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