Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00012
(730 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 131 1e-29
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 118 2e-25
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 113 6e-24
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 95 2e-18
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 78 3e-13
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 76 8e-13
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 73 7e-12
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 70 5e-11
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 70 5e-11
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 70 5e-11
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 70 7e-11
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 51 3e-05
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 50 4e-05
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 50 4e-05
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 47 5e-04
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 43 0.009
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725... 42 0.015
UniRef50_Q1NH79 Cluster: Butyryl-CoA dehydrogenase; n=3; Proteob... 35 1.8
UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=... 34 4.1
UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970; ... 33 9.5
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 131 bits (317), Expect = 1e-29
Identities = 59/86 (68%), Positives = 65/86 (75%)
Frame = +2
Query: 251 GSTYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDP 430
G TYGKPKSHGVNQLKP R LQSIA+E +SYW+AQD+SYKYFEVIL+D
Sbjct: 78 GCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDT 137
Query: 431 SHKAIRRDPKINWIVNAVHKHREMRG 508
H AIRRDPKINWI VHKHRE+RG
Sbjct: 138 HHSAIRRDPKINWICKHVHKHRELRG 163
Score = 116 bits (278), Expect = 8e-25
Identities = 50/57 (87%), Positives = 56/57 (98%)
Frame = +3
Query: 21 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQ 57
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 508 LTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
LTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 164 LTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 118 bits (283), Expect = 2e-25
Identities = 52/86 (60%), Positives = 62/86 (72%)
Frame = +2
Query: 251 GSTYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDP 430
G+TYGKP HGVNQLK R+LQS+A+E +SYWV +DS+YK+FEVIL+DP
Sbjct: 78 GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137
Query: 431 SHKAIRRDPKINWIVNAVHKHREMRG 508
HKAIRR+P WI VHKHREMRG
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRG 163
Score = 110 bits (265), Expect = 3e-23
Identities = 49/57 (85%), Positives = 54/57 (94%)
Frame = +3
Query: 21 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQ 57
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +1
Query: 508 LTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
LTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R
Sbjct: 164 LTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 113 bits (271), Expect = 6e-24
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +2
Query: 245 C*GSTYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILV 424
C G TYGKPK+HGVN+LK ++ Q++A+ +SYWVA+DS+YK++EV+L+
Sbjct: 76 CKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLI 135
Query: 425 DPSHKAIRRDPKINWIVNAVHKHREMRG 508
DP HKAIRR+P WI VHKHRE RG
Sbjct: 136 DPFHKAIRRNPDTQWITKPVHKHREQRG 163
Score = 100 bits (239), Expect = 4e-20
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = +3
Query: 21 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
MGAY+Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQ
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQ 57
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1
Query: 508 LTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
LTSAGR SRGLGKG R+S T+GGS+ W R+NT RKR
Sbjct: 164 LTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 94.7 bits (225), Expect = 2e-18
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +3
Query: 21 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
MGAYRY+QEL+RKK S+ MR+LLR+R WQYRQLT +HR RPTRP+KARRLGY + +
Sbjct: 1 MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNE 57
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +2
Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
+ K GVN++ +NLQ IA+E +SYWV +D S K+FE IL+DP H AI
Sbjct: 83 RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAI 142
Query: 446 RRDPKINWIVNAVHKHREMRG 508
+ D +NWI + HK+R RG
Sbjct: 143 QNDDDLNWICDDSHKNRVFRG 163
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 30 YRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
Y +I+E + + L R +R+ + R RPTR DKAR LGY+AKQ
Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQ 59
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/81 (44%), Positives = 45/81 (55%)
Frame = +2
Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
KP G + P ++LQ IA+E +SYWV +D YK+FEVI+VDP H I
Sbjct: 81 KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVI 140
Query: 446 RRDPKINWIVNAVHKHREMRG 508
+ DPKI WI HK R RG
Sbjct: 141 KSDPKIAWIALKHHKGRVFRG 161
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +3
Query: 21 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
MG Y+YI+E ++ + LL+ R+ ++R+ + R RPTR D+AR LGY+AKQ
Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQ 57
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = +2
Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
+PK GV P ++ + IA+E +SYWVA+D Y+++EVILVDP H AI
Sbjct: 103 RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAI 162
Query: 446 RRDPKINWIVNAVHKHREMRG 508
DP++ WI H+ R RG
Sbjct: 163 CSDPELKWICEKQHRGRVFRG 183
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = +3
Query: 9 QAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 188
Q+ G Y +++E +++ L++ R+ ++R+ + R +PTR D+AR LGY+AK
Sbjct: 19 QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78
Query: 189 Q 191
Q
Sbjct: 79 Q 79
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 70.1 bits (164), Expect = 5e-11
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Frame = -1
Query: 505 THLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFI 326
THL++L+ DP+ +R++++ + ++EDNL+ + I NPV Q +F+
Sbjct: 20 THLSVLVDWFGDPLGVRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFL 79
Query: 325 SNGLKVARGLQLVDTMALGLAISGPLATGRLRPPR--RTRILNTT*PCLAR*PSLRALSG 152
SN LK + +QLV+T+ LAIS L + +TT L PS LSG
Sbjct: 80 SNRLKASGKVQLVNTVVNRLAISCTLRKWAFSTTTADTNPVKDTTLLSLVSQPS---LSG 136
Query: 151 LVGLGARCIRVN*RYCHTLTRNKKRITSLSFFLYNS 44
+G GA N +YC T +K I S FFL++S
Sbjct: 137 WMGWGALYSAENWQYCQQWTLRRKHIMSDCFFLHSS 172
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +3
Query: 21 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
MGAYR + EL+R+K SDVM F+ RVR W +R R RPTRPDKARRLG +AKQ
Sbjct: 1 MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQ 54
Score = 49.2 bits (112), Expect(2) = 8e-07
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2
Query: 407 FEVILVDPSHKAIRRDPKINWIVNAVHKHREMRG 508
FE+ILVD +H AIR D +INW+ VHKH E+ G
Sbjct: 363 FEIILVDVAHSAIRDDLRINWLCKPVHKHGELHG 396
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 508 LTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
LTSAG RGL GKGH + + + S RA W R T+ LRR R
Sbjct: 397 LTSAGNKYRGLRGKGHTHHKARPSSPRATWKRNQTVSLRRYR 438
Score = 26.6 bits (56), Expect(2) = 8e-07
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 251 GSTYGKPKSHGVNQLKPTRN 310
G Y KPK G+ QLK RN
Sbjct: 337 GIVYSKPKHQGITQLKFQRN 356
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +2
Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
+PK GV P++ + IA+E SY+VA+D YKY+EVI+VD SH I
Sbjct: 81 RPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVI 140
Query: 446 RRDPKINWIVNAVHKHREMRG 508
R DP++ W+ ++V++ R RG
Sbjct: 141 RSDPELKWLQDSVNRKRVFRG 161
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 21 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
+ Y YI++ ++ K D R +LR R+ ++R+ + R RPTR ++AR LGY+AKQ
Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQ 57
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 69.7 bits (163), Expect = 7e-11
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +2
Query: 254 STYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPS 433
+T +PK GV + + NLQ +A++ SYWV +D+ YK+FEV+++DPS
Sbjct: 77 NTGRRPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVVMIDPS 136
Query: 434 HKAIRRDPKINWIVNAVHK 490
H AIR DP W+V ++
Sbjct: 137 HPAIRNDPDYAWVVGKEYR 155
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/57 (38%), Positives = 39/57 (68%)
Frame = +3
Query: 21 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
MG RY+ ++++K D +R +++ R+ ++R+ + R +PTR DKAR+ GY+AKQ
Sbjct: 1 MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQ 57
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
+P + GV QLK RN + +E + + +DS+YKY+E+ILVD +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
Query: 446 RRDPKIN 466
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +2
Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
+PK GV ++K +++ +A SY+V +D +Y +FEVIL DPSH +
Sbjct: 78 RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILADPSHPRV 137
Query: 446 RRDPKINWIVNA 481
+DP++ V A
Sbjct: 138 AKDPELRDRVGA 149
Score = 37.1 bits (82), Expect = 0.44
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 87 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
+R RV +R+ + R RPTR D+AR LGY+AKQ
Sbjct: 20 IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQ 54
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +2
Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
+PK GV + ++ + +A+E +SYWVA D Y+YFEVIL+D + I
Sbjct: 83 RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTI 142
Query: 446 RRDP 457
+ DP
Sbjct: 143 KNDP 146
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +3
Query: 27 AYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
AY Y+ YRK +V L+R + ++R+ + R RP R ++AR+LGY+AKQ
Sbjct: 5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQ 59
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +2
Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
+PK GV ++K N++++A+ SY++ +D + +FEVIL DP H +
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRV 176
Query: 446 RRDPKI 463
+D ++
Sbjct: 177 AQDKEL 182
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 87 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
LR RV +R+ + R +P+R +ARRLGY+AKQ
Sbjct: 59 LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQ 93
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 42.7 bits (96), Expect = 0.009
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -1
Query: 541 RDLGSCD-QPKSTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQ 365
R L +C QP THL +L+ DP+ +RI+++ + ++EDNL + I NPVR Q
Sbjct: 31 RALSACRCQP---THLPVLVEWFDDPLGVRISSDSFMEWINEDNLRKFLCGIFTNPVRIQ 87
Query: 364 HXXXXXXXXXTFISNGLKVARGL 296
+ + NGLK + L
Sbjct: 88 DAQSPMVASSSLLCNGLKASSKL 110
>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
Length = 520
Score = 41.9 bits (94), Expect = 0.015
Identities = 19/44 (43%), Positives = 32/44 (72%)
Frame = -1
Query: 508 TTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNP 377
T+ ++L++ + DPVD I ++G+V RV++DNL +LV R+L P
Sbjct: 465 TSEFSVLVHRVADPVDPWIISDGIVCRVYKDNLVVLVGRVLRKP 508
>UniRef50_Q1NH79 Cluster: Butyryl-CoA dehydrogenase; n=3;
Proteobacteria|Rep: Butyryl-CoA dehydrogenase -
Sphingomonas sp. SKA58
Length = 387
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/101 (26%), Positives = 45/101 (44%)
Frame = +2
Query: 404 YFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRG*LRLVAAPEVSARDIDTLKQREAHA 583
+FE LV H D ++ ++ R M G L V +D +KQR+A
Sbjct: 217 HFENALVADEHVLGEPDKAWYMLLPTLNNERIMVGAFCLGVIDGVLEDALDYMKQRKAFG 276
Query: 584 GQLGSDATLFNYVANDKHLSKTVSDFPFAYFCMQMESQWDN 706
G +G +L +YVA+ + KT ++C +S+ +N
Sbjct: 277 GIIGRFQSLQHYVADIATMQKTTE--LMLHYCAHKQSRGEN 315
>UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=1;
Azoarcus sp. BH72|Rep: General secretion pathway protein
F - Azoarcus sp. (strain BH72)
Length = 401
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 325 SNGLKVARGL-QLVDTMALGLAISGPLATGRLRPPRRTRIL 206
+ L V GL Q+ D +A G +SG LA+ R+ PPR TR+L
Sbjct: 294 AGNLVVRTGLEQVADDIAAGADLSGALASTRVFPPRVTRML 334
>UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 465
Score = 33.5 bits (73), Expect = 5.4
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = -3
Query: 353 HRNDGQHVHQQWIEGCAWASTG*HHGSWACHKWTL---SNWTLAATTSHTDSEYNITLFS 183
H++ V ++ A +ST G H+ TL SN+T AAT ++T++ N
Sbjct: 33 HQHHNDRVLPSLVQATADSSTS-PLGKLQPHQSTLTPLSNYTFAATNNNTNNRNNTITAK 91
Query: 182 TVA*SSGFVRPCGPGSAVHTSQLTVLPYPHTQQKTHNI 69
VA ++ P S VH+ L+ PH T +
Sbjct: 92 GVAPANAANAPIAVSSKVHSPALSEHQNPHFTTNTPRV 129
>UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970;
n=2; Homo sapiens|Rep: CDNA FLJ41135 fis, clone
BRACE2028970 - Homo sapiens (Human)
Length = 142
Score = 32.7 bits (71), Expect = 9.5
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 104 AVPSVDSYAPRSQAHKAGQSPKTRLPC*TRLCCIQNPCATWWPQA--SSC*GSTYGKPKS 277
A P V+S+ PR+Q H A P+T P T + + PC W + SSC G G +
Sbjct: 42 AHPQVESWVPRAQTHPA--PPQTWAPFFT-MHSSEQPCRQTWRASVLSSCEGLCLGPWRH 98
Query: 278 HGVNQLKPTRNLQSI 322
G + N++ +
Sbjct: 99 CGAGTGRAPANIKGV 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,436,826
Number of Sequences: 1657284
Number of extensions: 15135766
Number of successful extensions: 38725
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 37362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38706
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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