Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00012
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   129   8e-32
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    24   4.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   5.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   5.5  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   7.3  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   9.7  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   9.7  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  129 bits (312), Expect = 8e-32
 Identities = 57/86 (66%), Positives = 67/86 (77%)
 Frame = +2

Query: 251 GSTYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDP 430
           G TYGKPKSHGVNQLKP R LQS+A+E            +SYWVAQD+++KYFEVI+VDP
Sbjct: 78  GCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYWVAQDAAHKYFEVIMVDP 137

Query: 431 SHKAIRRDPKINWIVNAVHKHREMRG 508
            + AIRRDP +NWI NAVHKHRE+RG
Sbjct: 138 PNNAIRRDPNVNWICNAVHKHRELRG 163



 Score =  104 bits (249), Expect = 3e-24
 Identities = 45/56 (80%), Positives = 50/56 (89%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 188
           MGAYRY+QELYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAK 56



 Score = 65.7 bits (153), Expect = 1e-12
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +1

Query: 508 LTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
           LTSAG+SSRGLGK +RYSQT GGSRRAA +RRN L LRR R
Sbjct: 164 LTSAGKSSRGLGKAYRYSQTIGGSRRAAGVRRNRLHLRRYR 204


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 564 LRVSMSLAETSGAATSRSQPRISRCLCTAFT 472
           L + +SLA  +GA  S       RC+C A T
Sbjct: 8   LLLLLSLATVNGAFLSNLNATCFRCICDAST 38


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 729 FFFSNNILLSHWLSICIQK*ANGKSLTVLDR 637
           F   N ILL+ +L+I +   A+  SLT +++
Sbjct: 699 FICGNYILLNVFLAIAVDNLADADSLTTVEK 729


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 526 CDQPKSTTHLTMLMYSIHDPV 464
           C Q +  THL M +  ++DPV
Sbjct: 615 CVQEQDGTHLLMNLIKVNDPV 635


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 232 ASVQLLRVHLWQAQEPWCQPVEAHAQ 309
           ASV +   +L      W QPV +H Q
Sbjct: 507 ASVPMFETNLPGPSNGWVQPVPSHTQ 532


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 143 PGSAVHTSQLTVLPYPHTQQKTH 75
           PGS   +SQ +   + H QQ+ H
Sbjct: 14  PGSGASSSQRSPFHHHHQQQQNH 36


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 532 RGLGKGHRYSQTKGGSRR 585
           +G+G GH Y   + G RR
Sbjct: 320 KGVGSGHLYYYEENGDRR 337


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,399
Number of Sequences: 2352
Number of extensions: 14677
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)