Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00011
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    73   7e-15

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 73.3 bits (172), Expect = 7e-15
 Identities = 35/80 (43%), Positives = 50/80 (62%)
 Frame = +2

Query: 512 LQEIGQSQEPGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEG 691
           L+EI     P   T++FVETKR A+ ++  +    +P   +HGD+ Q+ER   LY FK G
Sbjct: 414 LEEILNGGNPKG-TLVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSG 472

Query: 692 RASILVATDVAARGLDVDGI 751
           R  +L+AT VAARGLD+  +
Sbjct: 473 RMDVLIATSVAARGLDIKNV 492



 Score = 70.5 bits (165), Expect = 5e-14
 Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
 Frame = +3

Query: 207 FLGKGHNQLTAVHIFSLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEV 374
           F+ +G+     V+   LDEADRMLDMGF P I K++       +  RQTLM+SAT+P E+
Sbjct: 313 FIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEI 372

Query: 375 KKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 503
           ++LA  +L +YI + +G +   A  ++ Q + + ++ +K  KL
Sbjct: 373 QELAGKFLHNYICVFVGIVG-GACADVEQTIHLVEKFKKRKKL 414



 Score = 63.7 bits (148), Expect = 6e-12
 Identities = 28/84 (33%), Positives = 48/84 (57%)
 Frame = +1

Query: 7   RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 186
           R   P  +++APTRELA QI      F H + ++    +GG   + Q + +  G  +++A
Sbjct: 246 RTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVA 305

Query: 187 TPGRLIDFLEKGTTNLQRCTYLVL 258
           TPGRL+DF+++G    +   ++VL
Sbjct: 306 TPGRLLDFIDRGYVTFENVNFVVL 329


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,444
Number of Sequences: 2352
Number of extensions: 15890
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)