Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00010
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061080-1|AAL28628.1|  173|Drosophila melanogaster LD06293p pro...   141   1e-33
AE014297-2192|AAF55303.1|  173|Drosophila melanogaster CG7013-PA...   141   1e-33
AF132912-1|AAD32615.1|  172|Drosophila melanogaster ARP-like pro...   134   1e-31
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    29   6.3  

>AY061080-1|AAL28628.1|  173|Drosophila melanogaster LD06293p
           protein.
          Length = 173

 Score =  141 bits (341), Expect = 1e-33
 Identities = 62/70 (88%), Positives = 67/70 (95%)
 Frame = +1

Query: 256 FKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQICDL 435
           FKKFCK  KNKE+RFCYYLGGLEESATGIL ELSKPLSWSMPA+KICEKLKKKDAQICDL
Sbjct: 57  FKKFCKAQKNKEHRFCYYLGGLEESATGILNELSKPLSWSMPAEKICEKLKKKDAQICDL 116

Query: 436 RFDKQIDLNN 465
           R++KQIDLN+
Sbjct: 117 RYEKQIDLNS 126



 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = +2

Query: 122 FLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAGSKSSVKVQRTKKIDF 301
           FLAT  Q  L+L+E DCEVCVKTV +FA +L D  KKD K+IE   K   K Q+ K+  F
Sbjct: 12  FLATLAQTSLALKEEDCEVCVKTVRRFADSLDDSTKKDYKQIETAFKKFCKAQKNKEHRF 71



 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +3

Query: 495 LEEDSNDWDEVCDGCIEKTDFIKRIEELKPKYMGRSDL 608
           L++  NDWDE CDGC+EK DFIKRIEELKPKY  RS+L
Sbjct: 137 LKKILNDWDESCDGCLEKGDFIKRIEELKPKY-SRSEL 173


>AE014297-2192|AAF55303.1|  173|Drosophila melanogaster CG7013-PA
           protein.
          Length = 173

 Score =  141 bits (341), Expect = 1e-33
 Identities = 62/70 (88%), Positives = 67/70 (95%)
 Frame = +1

Query: 256 FKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQICDL 435
           FKKFCK  KNKE+RFCYYLGGLEESATGIL ELSKPLSWSMPA+KICEKLKKKDAQICDL
Sbjct: 57  FKKFCKAQKNKEHRFCYYLGGLEESATGILNELSKPLSWSMPAEKICEKLKKKDAQICDL 116

Query: 436 RFDKQIDLNN 465
           R++KQIDLN+
Sbjct: 117 RYEKQIDLNS 126



 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = +2

Query: 122 FLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAGSKSSVKVQRTKKIDF 301
           FLAT  Q  L+L+E DCEVCVKTV +FA +L D  KKD K+IE   K   K Q+ K+  F
Sbjct: 12  FLATLAQTSLALKEEDCEVCVKTVRRFADSLDDSTKKDYKQIETAFKKFCKAQKNKEHRF 71



 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +3

Query: 495 LEEDSNDWDEVCDGCIEKTDFIKRIEELKPKYMGRSDL 608
           L++  NDWDE CDGC+EK DFIKRIEELKPKY  RS+L
Sbjct: 137 LKKILNDWDESCDGCLEKGDFIKRIEELKPKY-SRSEL 173


>AF132912-1|AAD32615.1|  172|Drosophila melanogaster ARP-like
           protein protein.
          Length = 172

 Score =  134 bits (323), Expect = 1e-31
 Identities = 61/70 (87%), Positives = 66/70 (94%)
 Frame = +1

Query: 256 FKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQICDL 435
           FKKFCK  KNKE+RFCY LGGLEESATGIL ELSKPLSWSMPA+KICEKLKKKDAQICDL
Sbjct: 57  FKKFCKAQKNKEHRFCY-LGGLEESATGILNELSKPLSWSMPAEKICEKLKKKDAQICDL 115

Query: 436 RFDKQIDLNN 465
           R++KQIDLN+
Sbjct: 116 RYEKQIDLNS 125



 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = +2

Query: 122 FLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAGSKSSVKVQRTKKIDF 301
           FLAT  Q  L+L+E DCEVCVKTV +FA +L D  KKD K+IE   K   K Q+ K+  F
Sbjct: 12  FLATLAQTSLALKEEDCEVCVKTVRRFADSLDDSTKKDYKQIETAFKKFCKAQKNKEHRF 71



 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +3

Query: 495 LEEDSNDWDEVCDGCIEKTDFIKRIEELKPKYMGRSDL 608
           L++  NDWDE CDGC+EK DFIKRIEELKPKY  RS+L
Sbjct: 136 LKKILNDWDESCDGCLEKGDFIKRIEELKPKY-SRSEL 172


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
            protein.
          Length = 2898

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 645  SHCDINIMQTFCVM*YGQCIC 707
            S+C+   MQ FC   YG+CIC
Sbjct: 1528 SNCNAKRMQGFCDTEYGRCIC 1548


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,255,974
Number of Sequences: 53049
Number of extensions: 568564
Number of successful extensions: 1194
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)