Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00009
(689 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406 ... 107 3e-22
UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep: His... 106 4e-22
UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histo... 93 4e-18
UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Hist... 91 3e-17
UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep: His... 89 9e-17
UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 71 3e-11
UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7; Trypanosoma... 69 1e-10
UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268; Eukaryota|... 66 8e-10
UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histo... 65 2e-09
UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179; Eukary... 65 2e-09
UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep: His... 65 2e-09
UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep: His... 64 4e-09
UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 63 5e-09
UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74; Eukaryo... 63 5e-09
UniRef50_Q00Y54 Cluster: Histone H2A; n=1; Ostreococcus tauri|Re... 62 2e-08
UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2... 61 2e-08
UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoid... 59 9e-08
UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n... 58 3e-07
UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep: H... 58 3e-07
UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma japonicum... 55 1e-06
UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333, ... 55 2e-06
UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis elegan... 54 4e-06
UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba hist... 52 1e-05
UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica ... 51 3e-05
UniRef50_A2YA27 Cluster: Histone H2A; n=2; Eukaryota|Rep: Histon... 50 4e-05
UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family prote... 50 7e-05
UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep... 49 1e-04
UniRef50_UPI0000E494D2 Cluster: PREDICTED: hypothetical protein;... 47 5e-04
UniRef50_P98176 Cluster: Histone H2A-Bbd; n=10; Eutheria|Rep: Hi... 46 7e-04
UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium longiflorum|... 46 9e-04
UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoid... 46 0.001
UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia intestinalis|... 45 0.002
UniRef50_Q9XG56 Cluster: Histone H2A.1; n=1; Lilium longiflorum|... 45 0.002
UniRef50_UPI000050472B Cluster: RIKEN cDNA 4930557A04 gene; n=1;... 43 0.006
UniRef50_UPI0000EB494E Cluster: UPI0000EB494E related cluster; n... 43 0.006
UniRef50_A6NLZ7 Cluster: Histone H2A; n=3; Homo/Pan/Gorilla grou... 43 0.008
UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, wh... 42 0.014
UniRef50_UPI0001554FEE Cluster: PREDICTED: hypothetical protein;... 41 0.025
UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila melanogast... 40 0.043
UniRef50_A7PU16 Cluster: Chromosome chr7 scaffold_31, whole geno... 40 0.057
UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein; ... 40 0.057
UniRef50_Q32P61 Cluster: Histone H2A; n=6; Laurasiatheria|Rep: H... 40 0.076
UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein; ... 40 0.076
UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Hist... 38 0.31
UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep: His... 37 0.53
UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;... 37 0.53
UniRef50_A0P1R8 Cluster: Putative uncharacterized protein; n=4; ... 36 0.93
UniRef50_Q07889 Cluster: Son of sevenless homolog 1; n=70; cellu... 36 0.93
UniRef50_Q4T4T2 Cluster: Chromosome undetermined SCAF9554, whole... 36 1.2
UniRef50_Q23UD2 Cluster: Phospholipid-translocating P-type ATPas... 36 1.2
UniRef50_UPI00005A604D Cluster: PREDICTED: similar to Histone H2... 35 2.2
UniRef50_Q497L1 Cluster: Predicted; n=10; Mus musculus|Rep: Pred... 35 2.2
UniRef50_A7PZY1 Cluster: Chromosome chr8 scaffold_41, whole geno... 34 2.9
UniRef50_A7SPX8 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.9
UniRef50_UPI0000565024 Cluster: H2A histone family member; n=3; ... 34 3.8
UniRef50_UPI0001553928 Cluster: PREDICTED: similar to H2A-Bbd; n... 33 5.0
UniRef50_Q4T188 Cluster: Chromosome undetermined SCAF10698, whol... 33 5.0
UniRef50_Q4S295 Cluster: Chromosome undetermined SCAF14764, whol... 33 5.0
UniRef50_O44859 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_O23127 Cluster: F19G10.9 protein; n=4; Arabidopsis thal... 33 8.7
UniRef50_A5BU78 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
>UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC564406 protein -
Strongylocentrotus purpuratus
Length = 338
Score = 107 bits (256), Expect = 3e-22
Identities = 51/59 (86%), Positives = 53/59 (89%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGGPGA 415
+ G +KDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKG A
Sbjct: 279 LAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGSQKA 337
>UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep:
Histone H2AV - Homo sapiens (Human)
Length = 128
Score = 106 bits (255), Expect = 4e-22
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKG 403
+ G +KDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKG
Sbjct: 69 LAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKG 123
Score = 99.5 bits (237), Expect = 7e-20
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHLK RTTSHGRVGATAAVYSAAILEYLTAEVLELAGNA K
Sbjct: 26 LQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 75
>UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histone
H2A - Paramecium tetraurelia
Length = 183
Score = 93.5 bits (222), Expect = 4e-18
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 400
+ G +KD KV+RITPRHLQLAIRGDEELD LI+ATIAGGGVIPHIHK+L GK+
Sbjct: 121 LAGNASKDFKVRRITPRHLQLAIRGDEELDILIRATIAGGGVIPHIHKALFGKQ 174
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHR+LK R ++ RVG T+AVY++AILEYLTAEVLELAGNA K
Sbjct: 78 LQFPVGRIHRYLKQRVSAKNRVGTTSAVYTSAILEYLTAEVLELAGNASK 127
>UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Histone
H2A.Z - Schizosaccharomyces pombe (Fission yeast)
Length = 171
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/51 (80%), Positives = 47/51 (92%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLI 391
+ G AKDLKVKRITPRHLQLAIRGDEELD+LI+ATIAGGGV+PHI+K L+
Sbjct: 107 LAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAGGGVLPHINKQLL 157
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGR+ R LK +T ++ RVGA +AVYSAA+LEYLTAEVLELAGNA K
Sbjct: 64 LQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAK 113
>UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep:
Histone H2A.Z - Saccharomyces cerevisiae (Baker's yeast)
Length = 134
Score = 89.0 bits (211), Expect = 9e-17
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 397
+ G AKDLKVKRITPRHLQLAIRGD+ELDSLI+ATIA GGV+PHI+K+L+ K
Sbjct: 74 LAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLK 126
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRI R+LK T RVG+ AA+Y A+LEYLTAEVLELAGNA K
Sbjct: 31 LQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAK 80
>UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 115
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGG 406
+ G A+D K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH++L+ KKGG
Sbjct: 46 LAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG 102
>UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7;
Trypanosomatidae|Rep: Histone H2A, putative - Leishmania
major
Length = 177
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/50 (60%), Positives = 40/50 (80%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSL 388
+ G AK K +RI PRHL LAIRGDEEL+ ++KATI+ GGV+P++HK+L
Sbjct: 115 LSGAAAKAQKTERIKPRHLLLAIRGDEELNQVVKATISRGGVVPNVHKAL 164
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
L FPVGRIH LK+ R GA+AA+Y AA+LEYLT EV+EL+G A K
Sbjct: 72 LNFPVGRIHSRLKDGLYRKQRCGASAAIYCAALLEYLTTEVIELSGAAAK 121
>UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268;
Eukaryota|Rep: Histone H2A type 2-A - Homo sapiens
(Human)
Length = 130
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGR+HR L+ + RVGA A VY AA+LEYLTAE+LELAGNA +
Sbjct: 24 LQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Score = 62.5 bits (145), Expect = 9e-09
Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ KK
Sbjct: 66 LAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
>UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histone
H2A - Acropora formosa (Staghorn coral)
Length = 125
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHR L+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRLLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKK 119
>UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179;
Eukaryota|Rep: Core histone macro-H2A.1 - Homo sapiens
(Human)
Length = 372
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 406
+ G A+D K R+TPRH+ LA+ DEEL+ L+K TIA GGV+P+IH L+ KK G
Sbjct: 63 LAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRG 119
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +3
Query: 117 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
FPVGR+ R++K + R+G A VY AA+LEYLTAE+LELAGNA +
Sbjct: 23 FPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEILELAGNAAR 69
>UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep:
Histone H2A.x - Homo sapiens (Human)
Length = 143
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGR+HR L+ + RVGA A VY AA+LEYLTAE+LELAGNA +
Sbjct: 24 LQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKG---- 403
+ G A+D K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 66 LAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATV 125
Query: 404 GPGAP 418
GP AP
Sbjct: 126 GPKAP 130
>UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep:
Histone H2A - Drosophila melanogaster (Fruit fly)
Length = 124
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHR L+ + RVGA A VY AA++EYL AEVLELAGNA +
Sbjct: 23 LQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAAR 71
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 119
>UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 158
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Frame = +2
Query: 191 SLFCRYFGISYSR-GFGVG-----GKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATI 349
S+F F + Y R G+G G D K RI PRH+QLA+R DEEL L+ ATI
Sbjct: 68 SVFLDPFDMRYCRESVGIGCWSSPGTRRGDNKKTRIVPRHIQLAVRNDEELTKLLGGATI 127
Query: 350 AGGGVIPHIHKSLIGKKGG 406
A GGV+P+IH+ L+ KK G
Sbjct: 128 ASGGVMPNIHQHLLPKKAG 146
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEV 233
LQFPVGRI R LK + RVGA A VY AA+LEYL AEV
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEV 64
>UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74;
Eukaryota|Rep: Core histone macro-H2A.2 - Homo sapiens
(Human)
Length = 372
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 406
+ G A+D K RI PRH+ LA+ DEEL+ L+K TIA GGV+P IH L+ KK G
Sbjct: 63 LAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRG 119
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +3
Query: 117 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
FPVGR+ R+LK T + R+ A VY AA++EYL AE+LELAGNA +
Sbjct: 23 FPVGRLMRYLKKGTFKY-RISVGAPVYMAAVIEYLAAEILELAGNAAR 69
>UniRef50_Q00Y54 Cluster: Histone H2A; n=1; Ostreococcus tauri|Rep:
Histone H2A - Ostreococcus tauri
Length = 152
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNA 254
LQFPVGR+ R+LK + RVGA A VY AA+LEYL AEVLELAGNA
Sbjct: 41 LQFPVGRVARYLKQGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNA 87
>UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2A
type 1; n=2; Euarchontoglires|Rep: PREDICTED: similar to
Histone H2A type 1 - Rattus norvegicus
Length = 177
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLAIR DEEL+ L+ + TIA GGV+P+I L+ KK
Sbjct: 71 LAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 125
>UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 143
Score = 59.3 bits (137), Expect = 9e-08
Identities = 29/42 (69%), Positives = 36/42 (85%), Gaps = 2/42 (4%)
Frame = +2
Query: 269 VKRITPRHLQLAIRGDEELDSLIK--ATIAGGGVIPHIHKSL 388
V+RI+PRHL LAI+ DEELD+LI+ TIAGGGVIP+IH+ L
Sbjct: 83 VRRISPRHLLLAIKTDEELDNLIRVSTTIAGGGVIPYIHEVL 124
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALKI 263
L FPVGRIHR LKN+ RV ++VY AAILEYL +EVLEL + + I
Sbjct: 26 LIFPVGRIHRMLKNKVPLK-RVSILSSVYLAAILEYLASEVLELTISQVSI 75
>UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 219
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -2
Query: 256 SAFPANSKTSAVRYSKIAAE*TAAVAPTRPWLVVLFLRCL*ILPTGN*SPALADLET 86
+A PANS+TSA +YSK AA+ T A P L + F + L ILPTGN PALADLET
Sbjct: 45 AALPANSRTSAAKYSKTAAKQTGAPVPILS-LYLPFFKNLEILPTGNQRPALADLET 100
Score = 37.1 bits (82), Expect = 0.40
Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 375 MCGMTPPPAIVAF-MRLSNSSSPLIASCKCRGVIRFTFKSLAHFP 244
M G TPP AIV M L NSSS LIA+ C G I SLA P
Sbjct: 4 MLGKTPPSAIVVLAMSLFNSSSFLIANKICLGTILVFLLSLAALP 48
>UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB30ED UniRef100
entry - Canis familiaris
Length = 243
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +3
Query: 117 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
FPVGR+ R++K + R+G A VY AA+LEYLTAE+LELAGNA +
Sbjct: 23 FPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEILELAGNAAR 69
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELD 328
+ G A+D K R+TPRH+ LA+ DEEL+
Sbjct: 63 LAGNAARDNKKGRVTPRHILLAVANDEELN 92
>UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep:
Histone H2A - Tetraodon nigroviridis (Green puffer)
Length = 258
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +2
Query: 236 GVGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 400
G G + A++ K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 56 GAGRQRARNNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 111
>UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma
japonicum|Rep: Histone H2A - Schistosoma japonicum
(Blood fluke)
Length = 156
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKG 403
+ G AK K K ITPRH+ L +R D EL+ L+K I+ GGV+P IH +L+ +KG
Sbjct: 66 LSGNAAKANKRKTITPRHIMLGVRNDAELNELLKHVHISHGGVLPCIHPALLKRKG 121
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
L V R+HR++K + R A+VY +A++EYL AEV EL+GNA K
Sbjct: 24 LVISVSRVHRYMKKGRYAR-RTSIAASVYMSAVIEYLVAEVNELSGNAAK 72
>UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1333, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 195
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/48 (62%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNA 254
LQFPV RI R+LK S RVG A+VY A +LEYL EVLELA NA
Sbjct: 78 LQFPVSRIDRYLKKGCYSQ-RVGTGASVYLATVLEYLATEVLELARNA 124
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 AKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
A D + RI PRH+ LA+R DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 125 AWDNQKHRIIPRHVLLAVRNDEELGKLLAGVTIARGGVLPNINHILLPKK 174
>UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis
elegans|Rep: Histone H2A - Caenorhabditis elegans
Length = 145
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNA 254
L FPVGRIHR L+ T R+ A A+V+ AA LEYLT E++E++ A
Sbjct: 36 LTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIA 83
Score = 49.2 bits (112), Expect = 9e-05
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +2
Query: 254 AKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIP-HIHKSLIGKK 400
A + K R+TPRHL LAI GD+E L+ K T+ GGV P IH SL+ KK
Sbjct: 84 ANESKKSRVTPRHLHLAIYGDQETAQLLDKVTLPQGGVTPMPIHPSLLPKK 134
>UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: histone H2A - Entamoeba
histolytica HM-1:IMSS
Length = 159
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 GGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKG 403
GG+ AKD RITPRH+QLA+R D EL+ L+K TI+ GGV P++ + + KG
Sbjct: 97 GGQ-AKDFHKTRITPRHIQLAVRSDLELNDLLKDVTISYGGVFPNV-PTAVNSKG 149
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 111 LQFPVGRIHRHLKN-RTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPV RIH LK R H + A+VY A++EYL AEVLELAG K
Sbjct: 53 LQFPVARIHAALKKGRYGEH--INKMASVYLTAVIEYLVAEVLELAGGQAK 101
>UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
indica (Rice)
Length = 180
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A D K RI PRH+ LAIR D+EL L+ TIA GGV+P+I+ L+ K+
Sbjct: 81 LAGNMAWDNKKNRIIPRHVLLAIRNDDELGKLLAGVTIAHGGVLPNINPVLLPKE 135
>UniRef50_A2YA27 Cluster: Histone H2A; n=2; Eukaryota|Rep: Histone
H2A - Oryza sativa subsp. indica (Rice)
Length = 88
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +3
Query: 114 QFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLE 239
QFPVGRI R+LK + RVG+ A VY AA+LEYL AEVLE
Sbjct: 35 QFPVGRIGRYLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLE 75
>UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family protein;
n=2; Tetrahymena thermophila|Rep: Core histone
H2A/H2B/H3/H4 family protein - Tetrahymena thermophila
SB210
Length = 388
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
L FP GR+ R+LK + RV ++ +Y A +LEYL AEVLE AGN K
Sbjct: 289 LVFPCGRLRRYLK-QACKQFRVSSSCNIYLAGVLEYLAAEVLETAGNIAK 337
>UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep:
Histone H2A - Trypanosoma cruzi
Length = 135
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNA 254
L FPVGR+ L+ + R+GA+ AVY AA+LEYLTAE+LEL+ A
Sbjct: 25 LIFPVGRVGSLLRRGQYAR-RIGASGAVYMAAVLEYLTAELLELSVKA 71
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +2
Query: 266 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGK 397
K KR+TPR + LA+R D++L L+K T++ GGV+P ++K+L K
Sbjct: 78 KPKRLTPRTVTLAVRHDDDLGMLLKDVTLSRGGVMPSLNKALAKK 122
>UniRef50_UPI0000E494D2 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 96
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNAL 257
LQF VG +H ++ + RVG A VY AA+LEYLTAE+LEL A+
Sbjct: 9 LQFSVGPVHWFVRKGNYAQ-RVGGGAPVYMAAVLEYLTAEILELTDIAV 56
>UniRef50_P98176 Cluster: Histone H2A-Bbd; n=10; Eutheria|Rep:
Histone H2A-Bbd - Homo sapiens (Human)
Length = 115
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 251
L F V ++ R L+ + R+ TA VY AA++EYLTA+VLELAGN
Sbjct: 28 LSFSVSQVERSLREGHYAQ-RLSRTAPVYLAAVIEYLTAKVLELAGN 73
>UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium
longiflorum|Rep: Histone H2A.2 - Lilium longiflorum
(Trumpet lily)
Length = 128
Score = 46.0 bits (104), Expect = 9e-04
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 251
LQF V R+ LK R+GATA VY AA+LE L AEVLE+A N
Sbjct: 24 LQFSVSRVEYSLKKGRYCR-RLGATAPVYLAAVLENLVAEVLEMAAN 69
Score = 37.5 bits (83), Expect = 0.31
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 278 ITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
I PRH+ LA+R D E++ L TI+ GV+P K L +K
Sbjct: 79 IKPRHIMLAVRNDVEVNKLFHGVTISASGVVPKTRKELDRRK 120
>UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALKI*K 269
+ FPV R+ R L+ + RV +TA VY AA+LEYL E+LELA N I K
Sbjct: 43 ITFPVSRVDRLLREGRFAP-RVESTAPVYLAAVLEYLVFEILELAHNTCSISK 94
Score = 39.9 bits (89), Expect = 0.057
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 266 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGP 409
K RITP+H+ A+ D EL+SL + TIA GGV+P +S KK P
Sbjct: 94 KKTRITPQHINWAVGNDLELNSLFQHVTIAYGGVLPTPQQSTGEKKKKP 142
>UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia
intestinalis|Rep: Histone H2A - Giardia lamblia ATCC
50803
Length = 124
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 251
+ FP+GRIHRHL+ + R+ + A VY AA+LE + AEV A N
Sbjct: 21 ISFPIGRIHRHLREGRYAE-RISSDAPVYLAAVLENVVAEVFREACN 66
>UniRef50_Q9XG56 Cluster: Histone H2A.1; n=1; Lilium
longiflorum|Rep: Histone H2A.1 - Lilium longiflorum
(Trumpet lily)
Length = 110
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 251
LQF V R+ LK R+GATA VY AA+LE L AEVL++A N
Sbjct: 24 LQFSVSRVEYSLKKGRYCR-RLGATAPVYLAAVLENLVAEVLDMAAN 69
>UniRef50_UPI000050472B Cluster: RIKEN cDNA 4930557A04 gene; n=1;
Rattus norvegicus|Rep: RIKEN cDNA 4930557A04 gene -
Rattus norvegicus
Length = 122
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 248
L FPV ++ R L+ R TS ++A V+ A +LEYLT+ +L+LAG
Sbjct: 17 LHFPVNKVERLLRERNTSKCP-NSSAPVFLAGVLEYLTSNILDLAG 61
>UniRef50_UPI0000EB494E Cluster: UPI0000EB494E related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB494E UniRef100
entry - Canis familiaris
Length = 103
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 248
LQFP+ R+ R L+ +H + + V+ A+ILEYLTA +LELAG
Sbjct: 25 LQFPISRVDRLLREGHYAHC-LSLSMPVFLASILEYLTANILELAG 69
>UniRef50_A6NLZ7 Cluster: Histone H2A; n=3; Homo/Pan/Gorilla
group|Rep: Histone H2A - Homo sapiens (Human)
Length = 116
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGR-VGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPV + R L R + H R + +T V+ A +LEYLTA +LE G +K
Sbjct: 23 LQFPVSHLERCL--RESQHARHLSSTTPVFLAGVLEYLTANILEKVGKEVK 71
>UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_69, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 494
Score = 41.9 bits (94), Expect = 0.014
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQF + I R+LK S R G +A VY AILEYL EV +LA NA K
Sbjct: 419 LQFLICCIGRYLKKDCHSQ-RFGTSAQVYLTAILEYLAVEVWKLARNAAK 467
>UniRef50_UPI0001554FEE Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 146
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 251
L+F V + R L+ S RV V+ AA+LEYLTAE+LELAG+
Sbjct: 30 LRFSVSLVDRFLRRGRYSR-RVAEGTPVFLAAVLEYLTAELLELAGH 75
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGV-IPHIHKSLI 391
+ G A + +RI P HL+ A+R D ELD L ++ G +P +H +L+
Sbjct: 72 LAGHTAGAHRRQRIAPVHLRQAVRDDPELDRLFGDIVSSPGAGLPRLHSALL 123
>UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila
melanogaster|Rep: Histone H2A - Drosophila melanogaster
(Fruit fly)
Length = 286
Score = 40.3 bits (90), Expect = 0.043
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 200 CRYFGISYSRGFGVGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGG 358
CR GIS + G A+D RI PRHL LAIR D EL+ L+ TI G
Sbjct: 127 CRN-GISGPEVLELAGNAARDNNKTRIIPRHLHLAIRNDTELNMLLSGVTITQG 179
>UniRef50_A7PU16 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 157
Score = 39.9 bits (89), Expect = 0.057
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQF VG+I LK+ + A VY +A LEYL EVLEL+GN +
Sbjct: 26 LQFIVGQIAHFLKSLQVIWS-CSSNAPVYVSAFLEYLAVEVLELSGNVAR 74
>UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 260
Score = 39.9 bits (89), Expect = 0.057
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 275 RITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 391
RITP+H+ L+I D EL+ L+K TIA GGV IH L+
Sbjct: 193 RITPQHIHLSICCDAELNDLLKNVTIANGGVPKFIHPILL 232
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELA 245
L FPV RI + ++ + R + A V+ AA+LEYLT E+LEL+
Sbjct: 139 LTFPVSRIEKMIREGRFTK-RCSSDAPVFLAAVLEYLTLEILELS 182
>UniRef50_Q32P61 Cluster: Histone H2A; n=6; Laurasiatheria|Rep:
Histone H2A - Bos taurus (Bovine)
Length = 117
Score = 39.5 bits (88), Expect = 0.076
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 248
LQFPV R+ R L+ ++ R+ + V+ ILEYL A +L+LAG
Sbjct: 26 LQFPVSRVDRLLREGQFAN-RLSSATPVFLTGILEYLIANILDLAG 70
>UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 286
Score = 39.5 bits (88), Expect = 0.076
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALKI*K 269
L V R+ + L+ R S RV T+ V+ AA+LEY+ E+LEL+ N L + K
Sbjct: 186 LTISVSRVEKLLRGRRYSK-RVSPTSCVFLAAVLEYMVLELLELSLNELSLSK 237
>UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Histone
H2A - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 713
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
L PV +IH LK ++ +VY A+LEY++A++L+LAGN ++
Sbjct: 103 LALPVDKIHPLLKE--VLGYKIDHQVSVYIVAVLEYISADILKLAGNYVR 150
>UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep:
Histone H2A - Oryza sativa subsp. indica (Rice)
Length = 276
Score = 36.7 bits (81), Expect = 0.53
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE 230
LQFPVGR +LK + RVG A VY AA+LEYL AE
Sbjct: 30 LQFPVGR---YLKKGHYAQ-RVGIGAPVYLAAVLEYLAAE 65
>UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;
Eumetazoa|Rep: Histone H2A [Contains: Hipposin] -
Hippoglossus hippoglossus (Atlantic halibut)
Length = 52
Score = 36.7 bits (81), Expect = 0.53
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVY 197
LQFPVGR+HR L+ +H RVGA A VY
Sbjct: 24 LQFPVGRVHRLLRKGNYAH-RVGAGAPVY 51
>UniRef50_A0P1R8 Cluster: Putative uncharacterized protein; n=4;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 391
Score = 35.9 bits (79), Expect = 0.93
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +1
Query: 211 WNILQQRFWSWREMR*RFKSEAYYSSALTTCY*RR*RIGQPHKSNYRWRRRHPTHTQIS 387
W++LQ SW E+ R S Y + +TTC+ G KS +RWRR+ P T+I+
Sbjct: 240 WHMLQP-LDSWPELG-RLLSAIYLKTRVTTCHLPNLSSGL-RKSPFRWRRKDPFQTRIA 295
>UniRef50_Q07889 Cluster: Son of sevenless homolog 1; n=70; cellular
organisms|Rep: Son of sevenless homolog 1 - Homo sapiens
(Human)
Length = 1333
Score = 35.9 bits (79), Expect = 0.93
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
L PV +IH LK ++ +VY A+LEY++A++L+L GN ++
Sbjct: 103 LSLPVEKIHPLLKE--VLGYKIDHQVSVYIVAVLEYISADILKLVGNYVR 150
>UniRef50_Q4T4T2 Cluster: Chromosome undetermined SCAF9554, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9554,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 329
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATI 349
+ G A+D +RITPRH++LA+ D+E + + + +
Sbjct: 6 MAGNAARDKNKRRITPRHMKLAVANDDEPNQVTRQQV 42
>UniRef50_Q23UD2 Cluster: Phospholipid-translocating P-type ATPase,
flippase family protein; n=1; Tetrahymena thermophila
SB210|Rep: Phospholipid-translocating P-type ATPase,
flippase family protein - Tetrahymena thermophila SB210
Length = 3047
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 477 PTFILYFTLAGFVKY-----LNNIMFY*SYHHSVSYLNVDCVFPSSAFYLLTHF 623
P+ + +F + G + + ++N+ S+ HSVS+ CVF S FYLL +F
Sbjct: 1127 PSHLPFFHMTGMISFGASVLISNLKIL-SFSHSVSFFQTICVFGSYLFYLLCYF 1179
>UniRef50_UPI00005A604D Cluster: PREDICTED: similar to Histone
H2A-Bbd (H2A Barr body-deficient); n=2; Canis lupus
familiaris|Rep: PREDICTED: similar to Histone H2A-Bbd
(H2A Barr body-deficient) - Canis familiaris
Length = 163
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 251
L F V ++ R L+ + R+GA+A ++ AA++++LTA VL LAG+
Sbjct: 76 LAFSVCQMERLLRAGRYAK-RLGASAPIFLAAVIQFLTATVLGLAGD 121
>UniRef50_Q497L1 Cluster: Predicted; n=10; Mus musculus|Rep:
Predicted - Mus musculus (Mouse)
Length = 109
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 114 QFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 248
+ P+ + R L+ S R+ ++A + ++LEYLT+ +LELAG
Sbjct: 20 ELPLSLVDRFLREEIHS-SRLSSSALPFLTSVLEYLTSNILELAG 63
>UniRef50_A7PZY1 Cluster: Chromosome chr8 scaffold_41, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_41, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 404
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 254 AKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIA 352
A+D K RI PRH+ +R DEEL L+ ATIA
Sbjct: 95 ARDNKKNRIIPRHVLSVVRNDEELGKLLAGATIA 128
>UniRef50_A7SPX8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 885
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVL 236
L FPVGRI R L + + RV AA+Y AA LEY+ E +
Sbjct: 114 LVFPVGRIFRWLLDMKVAC-RVYDAAAIYLAATLEYIAEETI 154
>UniRef50_UPI0000565024 Cluster: H2A histone family member; n=3; Mus
musculus|Rep: H2A histone family member - Mus musculus
Length = 115
Score = 33.9 bits (74), Expect = 3.8
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 251
L F V + +HL+ + + R+ ++ AAILE LT +LELAGN
Sbjct: 27 LIFAVSLVEQHLREISRAW-RLSDMVPIFLAAILESLTRRLLELAGN 72
>UniRef50_UPI0001553928 Cluster: PREDICTED: similar to H2A-Bbd; n=2;
Mus musculus|Rep: PREDICTED: similar to H2A-Bbd - Mus
musculus
Length = 172
Score = 33.5 bits (73), Expect = 5.0
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHG-RVGATAAVYSAAILEYLTAEVLELAGN 251
L F V + + L R SH R+ ++ AAILE+LT +LELAGN
Sbjct: 23 LIFTVSLVEQSL--RDLSHAWRLSDMVPIFLAAILEFLTYRLLELAGN 68
>UniRef50_Q4T188 Cluster: Chromosome undetermined SCAF10698, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10698, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1407
Score = 33.5 bits (73), Expect = 5.0
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 171 RVGATAAVYSAAILEYLTAEVLELAGNALK 260
++ ++Y A+LEY++A++L+LAGN +K
Sbjct: 146 KIDHQVSLYMVAVLEYISADILKLAGNYVK 175
>UniRef50_Q4S295 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1379
Score = 33.5 bits (73), Expect = 5.0
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 171 RVGATAAVYSAAILEYLTAEVLELAGNALK 260
++ ++Y A+LEY++A++L+LAGN +K
Sbjct: 199 KIDHQVSLYMVAVLEYISADILKLAGNYVK 228
>UniRef50_O44859 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 221
Score = 33.1 bits (72), Expect = 6.6
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 402 PFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIAS-CKCRG 283
P+FP +D+C G+T P V LSNS P+ S C G
Sbjct: 90 PWFPYQDVCWNGLTSIPQAVFQSELSNSHQPVPQSESSCSG 130
>UniRef50_O23127 Cluster: F19G10.9 protein; n=4; Arabidopsis
thaliana|Rep: F19G10.9 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1152
Score = 32.7 bits (71), Expect = 8.7
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -3
Query: 687 QVIVTMELHNIDIRQITINLLENGSVGKMQMREKRSQHLNMKQSG 553
++ + M+ NI+ ++T N+L NG +M E R H +M++SG
Sbjct: 296 KIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 340
>UniRef50_A5BU78 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 306
Score = 32.7 bits (71), Expect = 8.7
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 257 KDLKVKRITPRHLQLAIRGDEELDSLIK-ATIA 352
+D K RI PRH+ +R DEEL L+ ATIA
Sbjct: 213 RDNKKNRIIPRHVLSVVRNDEELGKLLAGATIA 245
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,772,677
Number of Sequences: 1657284
Number of extensions: 12765355
Number of successful extensions: 33543
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 32417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33503
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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