Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00008
         (421 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   0.91 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   2.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   2.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   4.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 0.91
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 245 KDGY*TCTLYGNWQRYQ 295
           KDGY     Y NW +Y+
Sbjct: 84  KDGYKVVCYYTNWSQYR 100


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 302 SYADNVASFRTECRFNNHPS 243
           SY DNV+S RT+    N P+
Sbjct: 15  SYTDNVSSTRTKYLRTNFPN 34


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 419 YISNNSFSYLYKARVSFF 366
           Y S  SF YL+ A +SF+
Sbjct: 64  YTSLTSFGYLFCASLSFY 81


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 280 VSVQSAGLITILQSLLH*IQDRKEI 206
           V    AGL++    LLH + D+ E+
Sbjct: 415 VKAYGAGLLSAYGELLHALSDKPEL 439


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
          castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 5  DHDESSSDSGLLGTPEECDTPDREP 79
          DH+  SSD  +L    E   P+  P
Sbjct: 15 DHNSCSSDDTVLSVGNENPPPEDTP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,473
Number of Sequences: 336
Number of extensions: 1879
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)