Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00008
         (421 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   0.48 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   2.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   4.5  
AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione S-tran...    23   6.0  
Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein prot...    22   7.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.2 bits (55), Expect = 0.48
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 113  MVARKEKLNNDKLRIGALCSSLLESPEKKLK 205
            ++ RK+ + +DK +I A+ + L E  +KKLK
Sbjct: 999  VMRRKKVVEDDKKKIQAIITDLDEEKKKKLK 1029


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 77  VPYQVCHILQEYPT 36
           VP Q+C+ILQ+Y T
Sbjct: 596 VPLQLCNILQDYFT 609


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 77  VPYQVCHILQEY 42
           VP Q+C ILQ+Y
Sbjct: 601 VPVQLCRILQDY 612


>AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +1

Query: 184 ESREKVKK---FLSYPVSNGGETEGWLLNLHSVRKLATLSAYEVFKDILPEYQIRHQDYS 354
           E+ +K+K    FL+  +       G  L +  +  LAT+S Y+V    L +YQ     Y 
Sbjct: 125 ENEQKMKDAVGFLNSFLDGHKYVAGDSLTIADLSILATISTYDVAGFDLAKYQHVAAWYE 184

Query: 355 NVK 363
           N++
Sbjct: 185 NIR 187


>Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +1

Query: 184 ESREKVKK---FLSYPVSNGGETEGWLLNLHSVRKLATLSAYEVFKDILPEYQIRHQDYS 354
           E+ +K+K    FL+  +       G  L +  +  LAT+S Y+V    L +YQ     Y 
Sbjct: 125 ENEQKMKDAVDFLNTFLDGHKYVAGDSLTIADLSILATISTYDVAGFDLAKYQHVAVWYE 184

Query: 355 NVK 363
           N++
Sbjct: 185 NIR 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,916
Number of Sequences: 2352
Number of extensions: 7589
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)