Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00008
         (421 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051854-1|AAK93278.1|  822|Drosophila melanogaster LD35257p pro...    56   1e-08
AE014297-585|AAF54043.1|  822|Drosophila melanogaster CG1234-PA ...    56   1e-08
BT016081-1|AAV36966.1|  921|Drosophila melanogaster LD46555p pro...    28   5.8  
AE014134-3003|AAF53728.1|  921|Drosophila melanogaster CG18398-P...    28   5.8  

>AY051854-1|AAK93278.1|  822|Drosophila melanogaster LD35257p
           protein.
          Length = 822

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 23/49 (46%), Positives = 35/49 (71%)
 Frame = +2

Query: 92  VISAVDLMVARKEKLNNDKLRIGALCSSLLESPEKKLKNFFPILYLMEE 238
           +IS  DL++AR++++   K RIG +CS LLE PE K++NF  +  LM+E
Sbjct: 217 LISTTDLLIARQQEIERQKYRIGIICSGLLEKPEDKMRNFHALYELMDE 265



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = +1

Query: 259 NLHSVRKLATLSAYEVFKDILPEYQIRHQDYSNVKLKKDTL 381
           NL +VRKLA +S  E+FKDILPEY++   D     L+K TL
Sbjct: 274 NLMAVRKLAIISVTEIFKDILPEYRVGQVDTKMQTLRKATL 314


>AE014297-585|AAF54043.1|  822|Drosophila melanogaster CG1234-PA
           protein.
          Length = 822

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 23/49 (46%), Positives = 35/49 (71%)
 Frame = +2

Query: 92  VISAVDLMVARKEKLNNDKLRIGALCSSLLESPEKKLKNFFPILYLMEE 238
           +IS  DL++AR++++   K RIG +CS LLE PE K++NF  +  LM+E
Sbjct: 217 LISTTDLLIARQQEIERQKYRIGIICSGLLEKPEDKMRNFHALYELMDE 265



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = +1

Query: 259 NLHSVRKLATLSAYEVFKDILPEYQIRHQDYSNVKLKKDTL 381
           NL +VRKLA +S  E+FKDILPEY++   D     L+K TL
Sbjct: 274 NLMAVRKLAIISVTEIFKDILPEYRVGQVDTKMQTLRKATL 314


>BT016081-1|AAV36966.1|  921|Drosophila melanogaster LD46555p
           protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = +1

Query: 175 FARESREKVKKFLSYPVSNGGETEGWLLNLHSVRKLATLSAYEVFKDILPEYQIRHQDYS 354
           FA     +  K L+   +N G  E   +NL  + K A L   +   ++  EYQ+     S
Sbjct: 8   FALLESLRFSKALANTANNSGTAEALEINLRILEKYAKLEIGQQLHELCLEYQLTDDHES 67

Query: 355 NVKLKKD 375
           ++    D
Sbjct: 68  SIDPDSD 74


>AE014134-3003|AAF53728.1|  921|Drosophila melanogaster CG18398-PA
           protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = +1

Query: 175 FARESREKVKKFLSYPVSNGGETEGWLLNLHSVRKLATLSAYEVFKDILPEYQIRHQDYS 354
           FA     +  K L+   +N G  E   +NL  + K A L   +   ++  EYQ+     S
Sbjct: 8   FALLESLRFSKALANTANNSGTAEALEINLRILEKYAKLEIGQQLHELCLEYQLTDDHES 67

Query: 355 NVKLKKD 375
           ++    D
Sbjct: 68  SIDPDSD 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,760,603
Number of Sequences: 53049
Number of extensions: 338701
Number of successful extensions: 803
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)