Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00006
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,314... 121 6e-28
03_02_0694 - 10448712-10448996,10449030-10449074,10449588-104496... 100 1e-21
03_02_0865 - 11895257-11895340,11896004-11896069,11896297-118963... 42 3e-04
08_01_0925 + 9117217-9117576,9117674-9117749,9118460-9118592,911... 40 0.002
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 40 0.002
05_07_0125 + 27861368-27862282 37 0.012
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724... 34 0.11
03_06_0418 + 33785482-33785870,33786098-33786173,33786985-337870... 34 0.11
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424... 33 0.15
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 33 0.26
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 33 0.26
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 32 0.35
09_06_0188 - 21441377-21442201 32 0.46
09_06_0027 + 20318187-20318301,20318428-20318489,20318583-203186... 31 0.80
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 31 0.80
09_06_0028 + 20328599-20328821,20330659-20330735,20330806-203309... 31 1.1
08_02_0783 - 21166491-21166892,21167139-21167251,21168127-211682... 31 1.1
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 30 1.4
04_04_0979 - 29862280-29862444,29862718-29862999,29863831-298639... 30 1.9
07_03_1586 - 27929947-27930056,27930143-27930286,27930377-279307... 29 2.4
06_01_1037 - 8140602-8140782,8141489-8141545,8141649-8141845,814... 29 3.2
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 29 3.2
10_05_0104 + 9190779-9191847,9192544-9193332,9193652-9194049 29 4.3
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 29 4.3
04_01_0107 - 1107976-1108033,1108411-1108638,1110109-1110422,111... 29 4.3
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 28 5.6
04_04_1294 - 32424762-32426309 28 5.6
04_03_0876 + 20493213-20493339,20493574-20493642,20493745-20493890 28 5.6
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 27 9.9
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 27 9.9
>05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,
3144450-3144554,3145274-3145351,3146019-3146100,
3146519-3146681,3147100-3147435,3147511-3147641,
3147687-3147729,3147826-3148444,3148523-3148588,
3149103-3149265,3149557-3149635,3150232-3150431,
3150972-3151144,3151466-3151559,3152353-3152444,
3153146-3153436
Length = 1099
Score = 121 bits (291), Expect = 6e-28
Identities = 56/84 (66%), Positives = 72/84 (85%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
EELKKSL A+FSQFG+ILD++A KTLK +GQA+V+F +++SAT AL+SMQ FPF++KPMR
Sbjct: 883 EELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASATEALKSMQDFPFHNKPMR 942
Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
IQY+K SDIIAK+ GTF R +R
Sbjct: 943 IQYAKTKSDIIAKADGTFVPRERR 966
Score = 64.5 bits (150), Expect = 7e-11
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +3
Query: 372 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 506
PN ILF+ NLP ET+ MML MLF Q+PGFKEVR+V + IAFVE
Sbjct: 1023 PNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVE 1067
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 509 GNEMQSAAAKEALQGFKITPTHAMKITFAKK 601
G+E Q+ AA LQGFKIT + M I++AKK
Sbjct: 1069 GDEGQATAAMNHLQGFKITKDNQMLISYAKK 1099
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 88 GQAFVIFREISSATVALRSMQGFPF-YDKPMRIQYSK 195
G AFV + + AT A+ +QGF D M I Y+K
Sbjct: 1062 GIAFVEYGDEGQATAAMNHLQGFKITKDNQMLISYAK 1098
>03_02_0694 -
10448712-10448996,10449030-10449074,10449588-10449647,
10449817-10449890,10451056-10451149,10451851-10452023,
10452526-10452598
Length = 267
Score = 100 bits (239), Expect = 1e-21
Identities = 47/84 (55%), Positives = 64/84 (76%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
EELK+SLYA+ SQ+G+ILD+VA+KT K+RGQA+V+F EI++AT A R +Q F FY K MR
Sbjct: 24 EELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITAATNAFRGLQEFDFYGKRMR 83
Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
+QY+K SD +A G+ + KR
Sbjct: 84 VQYAKTRSDCLATEDGSTAPKEKR 107
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +3
Query: 369 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
PPN ILF+ NLP ET+ MML +LF Q+PGF+EVR++ + IAFVE E
Sbjct: 190 PPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEYE 237
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
++ QS A +ALQGFKITP + M I++AKK
Sbjct: 238 DDSQSMVAMQALQGFKITPYNPMAISYAKK 267
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 88 GQAFVIFREISSATVALRSMQGFPFYD-KPMRIQYSK 195
G AFV + + S + VA++++QGF PM I Y+K
Sbjct: 230 GIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAK 266
>03_02_0865 -
11895257-11895340,11896004-11896069,11896297-11896355,
11896470-11896557,11897158-11897328,11897406-11897564,
11897653-11897835,11897931-11898012,11898753-11898959,
11899099-11899170,11901948-11902055,11902460-11902506
Length = 441
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1
Query: 52 LDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
L I M+ +MRGQAFV F + A AL + GF F KPM IQ+ +
Sbjct: 386 LSIKLMQEGRMRGQAFVTFPSVELAQRALNLVHGFVFKGKPMIIQFGR 433
>08_01_0925 +
9117217-9117576,9117674-9117749,9118460-9118592,
9118684-9118795,9119121-9119180,9119425-9119516,
9119628-9119697,9119776-9119880
Length = 335
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 321 HGIPGAGILNNVNA-EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDI 494
+ + + NN N + PP LF+ NL + E L LF+ PG+K+++++ +R+ +
Sbjct: 236 YNFSSSSLKNNQNTKDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTV 295
Query: 495 AFVELE 512
F+E E
Sbjct: 296 CFIEFE 301
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 19 LYAIFSQFGQILDIVAMKTLKMR---GQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
LY +FSQ GQ++ + + + R G A+V F A AL + P KP+R+ Y
Sbjct: 55 LYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELLNFAPLNGKPIRVMY 114
Query: 190 SKID 201
S D
Sbjct: 115 SNRD 118
>05_07_0125 + 27861368-27862282
Length = 304
Score = 37.1 bits (82), Expect = 0.012
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLK--MRGQAFVIFREISSATVALRSMQGFPFYDKP 174
E+ + +Y S+FG++ + L M G +V FRE A A ++QG + +P
Sbjct: 79 EDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGRFYSGRP 138
Query: 175 MRIQYSKIDSDIIAKSKGTFQE----RPKRPSYLKVLMMGRKRKTKI 303
+ ++YS + +D + F+E R +++ V +GR+ + K+
Sbjct: 139 IIVEYSPV-TDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKL 184
>09_02_0322 -
7240125-7241568,7242043-7243253,7245782-7246144,
7246502-7246522
Length = 1012
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 16 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
+L+ FS FG+++ I T R AFV + I++A A ++QG F + + I +S+
Sbjct: 193 TLWEAFSPFGEVVKIT---TFPGRTYAFVQYTTIAAACRAKETLQGNIFNNPRVSICFSR 249
Query: 196 IDSDIIAKSKGTFQERPKRP 255
DS KG+ + P P
Sbjct: 250 SDSVSAEFGKGSL-DAPYSP 268
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 85 RGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSKID 201
R AFV F A A+R +QG P+RI++SK D
Sbjct: 91 RSFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEFSKGD 129
>03_06_0418 +
33785482-33785870,33786098-33786173,33786985-33787071,
33788096-33788143
Length = 199
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
+ +Y IF ++G I I RG AFV++ +I A A+ + GF ++ + + Y
Sbjct: 33 EEMYDIFGKYGAIRQIRLGNAKDTRGTAFVVYEDIYDAKNAVDHLSGFNVANRYLIVLY 91
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 345 LNNVNAEQPP--NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL 473
L NA PP N++L++ NLP S + +F ++ +++RL
Sbjct: 6 LRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRL 50
>04_04_1121 -
31041629-31041793,31041891-31042022,31042255-31042425,
31042521-31042622,31042703-31042807,31043115-31043286,
31043916-31043980,31044179-31044502,31044729-31044846,
31044928-31045011,31045472-31045603,31045714-31046570,
31046735-31046849,31047371-31047481,31047763-31047824
Length = 904
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPM 177
E +K L +FS FGQI + + MK RG AFV F A AL+++ Y + +
Sbjct: 791 EATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHL 850
Query: 178 RIQYSK 195
I+ +K
Sbjct: 851 VIERAK 856
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILD--IVAMKTLKMRGQAFVIFREISSATVALRSMQG 153
KSLY +FS FG IL + K +G F+ F SSA A+ + G
Sbjct: 163 KSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNG 211
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/60 (25%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = +1
Query: 19 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
L A+F+Q+G+++D+ ++ T K +G AF+ + + S +A+ ++ G + +R+ +
Sbjct: 52 LLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDH 111
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLK--MRGQAFVIFREISSATVALRSMQGFPFYDKP 174
E+ + ++ S+FG+I ++ L M G +V FRE A A ++QG + +P
Sbjct: 74 EDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRP 133
Query: 175 MRIQYSKI 198
+ + +S +
Sbjct: 134 IIVDFSPV 141
>09_06_0188 - 21441377-21442201
Length = 274
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 19 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQG 153
L+ +FS+FG++ + +K + + RG AFV+F A A M G
Sbjct: 86 LHTLFSRFGRVARVTVLKDRDSRRSRGVAFVLFVRREDAAAAAAEMHG 133
>09_06_0027 +
20318187-20318301,20318428-20318489,20318583-20318661,
20319096-20319168,20319860-20319939,20320283-20320404
Length = 176
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 360 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
A + ++ L++ LP ++ ++ +F F GF+EVRLV
Sbjct: 15 ATRTESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLV 53
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 25 AIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
A FS G LD V M R AFV+FR + A AL ++QG +R+++++
Sbjct: 64 ASFSPHGA-LDCV-MARAGPRSYAFVLFRSVPEARAALDALQGSKVKGSVVRLEFAR 118
>09_06_0028 +
20328599-20328821,20330659-20330735,20330806-20330968,
20331095-20331156,20331250-20331328,20331818-20331898,
20332068-20332216,20332254-20332319,20332495-20332643,
20332722-20332761,20333001-20333015
Length = 367
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 351 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
N A ++ L++ LP ++ ++ +F F GF+EVRLV
Sbjct: 128 NHGATITESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLV 169
>08_02_0783 -
21166491-21166892,21167139-21167251,21168127-21168208,
21168298-21168416,21168471-21168528,21168954-21169016,
21169641-21169850,21171549-21171731
Length = 409
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 19 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYD 168
L+ +FS FG + I AM QA + + +I++A VA ++++G YD
Sbjct: 209 LHTVFSAFGTVQKI-AMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYD 257
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 19 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSKI 198
L+ Q Q +V T +G FV F + SA VAL M G+P + ++ + +
Sbjct: 719 LFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGV 778
Query: 199 DSDIIAKSKGTF 234
D ++ F
Sbjct: 779 HPDAMSSYMAHF 790
>04_04_0979 -
29862280-29862444,29862718-29862999,29863831-29863929,
29864037-29864366
Length = 291
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 28 IFSQFGQILDIVAMKTL--KMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
+F+Q G + D+ +K K +G AFV A A+ + + +R+++SK
Sbjct: 99 LFAQCGAVKDVEVIKGKDGKKKGFAFVTMATAEEAAAAVEKLNSLDVMGRTIRVEFSK 156
>07_03_1586 -
27929947-27930056,27930143-27930286,27930377-27930704,
27931189-27931404,27932099-27932284,27932439-27932521,
27932621-27932752,27932943-27932999,27933352-27933412,
27933807-27933889,27933975-27934134
Length = 519
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 330 PGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
P +G+ N AEQ LF+ LP + E +S LF+Q+ ++++++
Sbjct: 112 PQSGVQGNAAAEQK----LFIGMLPRDVKENEVSALFSQYGNIRQLKVL 156
>06_01_1037 -
8140602-8140782,8141489-8141545,8141649-8141845,
8143174-8143242,8143347-8143490,8144055-8144225
Length = 272
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +1
Query: 10 KKSLYAIFSQFGQILDIVAMKTLKMR--GQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
K+ + +FS+ G + R G A VIF S A AL+ KPM+I
Sbjct: 101 KEDIQELFSEMGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVAALKRYNNVRLDGKPMKI 160
Query: 184 QYSKIDSDIIAKS 222
+ D + A S
Sbjct: 161 EVIGADLGMAAPS 173
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 493 ISCLFGTRRTSLKPGN*LNNIDNIISEVSSGRF 395
+ C F T S KPG L+N D+++ E S+ F
Sbjct: 846 VHCKFFTFGDSFKPGGELSNFDDLLKERSATNF 878
>10_05_0104 + 9190779-9191847,9192544-9193332,9193652-9194049
Length = 751
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 348 NNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEL 509
NN+ + PN FLT+L + + + L + FN+ GF LV ++ ++ L
Sbjct: 278 NNILEAKTPNDRDFLTSLTNCSELVTLDLQFNRLSGFIPNTLVNLSQELIWIGL 331
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 13 KSLYAIFSQFGQILD--IVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
K+LY FS FG IL + + + +G FV F +A A+ + G DK + +
Sbjct: 141 KALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
>04_01_0107 -
1107976-1108033,1108411-1108638,1110109-1110422,
1110568-1110680,1111740-1111845
Length = 272
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 28 IFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPF 162
+F ++G+I D + MK+ G AFV F + A+R++ G+PF
Sbjct: 21 LFYRYGRI-DRIDMKS----GFAFVYFEDERDGDEAIRALDGYPF 60
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 384 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFV 503
LF+ LP + E + ++F+Q + +R+V R IAFV
Sbjct: 256 LFVGGLPKDCVEEDIRVVFSQCGEVESIRIVKKRKRIAFV 295
>04_04_1294 - 32424762-32426309
Length = 515
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 19 LYAIFSQFGQILD---IVAMKTLKMRGQAFVIFREISSATVALRSMQ 150
L + FS+FG++ D I ++ + +G FV+FR SA ALR Q
Sbjct: 130 LRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQ 176
>04_03_0876 + 20493213-20493339,20493574-20493642,20493745-20493890
Length = 113
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 16 SLYAIFSQFGQILD--IVAMK-TLKMRGQAFVIFREISSATVALRSMQG 153
SL FSQ+GQ+L+ IV K T + +G FV F +A A M G
Sbjct: 52 SLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNG 100
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
+ + K +Y +F + Q L +K +++ G + R SA A + P +P+
Sbjct: 325 DAMSKVIYEVFPEPNQQLLQRILKMMQIVGSHKAVNRMSPSALAACMA----PLLLRPLL 380
Query: 181 IQYSKIDSDIIAKSKGTFQ 237
+ +IDSD G+FQ
Sbjct: 381 LGECEIDSDFSMAGDGSFQ 399
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 453 GFKEVRLVPNRHDIAFVELEMKCNLQQLKKHYKD 554
G+ E + RH+ +F L+ NLQQ +K K+
Sbjct: 868 GYYENSCISTRHNFSFARLDGTLNLQQREKVIKE 901
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,114,221
Number of Sequences: 37544
Number of extensions: 318918
Number of successful extensions: 725
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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