Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00006
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M89775-1|AAA28441.1| 216|Drosophila melanogaster small nuclear ... 149 2e-36
L29521-1|AAA28903.1| 216|Drosophila melanogaster nuclear protei... 149 2e-36
AY061491-1|AAL29039.1| 216|Drosophila melanogaster LD45302p pro... 149 2e-36
AE014298-717|AAF46017.1| 216|Drosophila melanogaster CG4528-PA ... 149 2e-36
BT024321-1|ABC86383.1| 407|Drosophila melanogaster IP10959p pro... 41 0.001
AE013599-3316|AAM68198.1| 407|Drosophila melanogaster CG30327-P... 40 0.002
AY089603-1|AAL90341.1| 121|Drosophila melanogaster RE19804p pro... 37 0.028
AE014296-1096|AAF50675.1| 121|Drosophila melanogaster CG13298-P... 37 0.028
AE014134-3163|AAF53845.1| 154|Drosophila melanogaster CG10466-P... 36 0.048
AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p pro... 31 1.0
AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA ... 31 1.0
X15702-1|CAA33732.1| 544|Drosophila melanogaster protein ( Frui... 31 1.4
AY058519-1|AAL13748.1| 542|Drosophila melanogaster LD22216p pro... 31 1.4
AE014297-4840|AAF57213.1| 542|Drosophila melanogaster CG2050-PA... 31 1.4
AF172637-1|AAD46930.1| 266|Drosophila melanogaster LD24793p pro... 30 3.2
AE014297-550|AAF54070.1| 266|Drosophila melanogaster CG1101-PA ... 30 3.2
BT011006-1|AAR27877.1| 690|Drosophila melanogaster AT27578p pro... 29 4.2
AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p pro... 29 4.2
AY058617-1|AAL13846.1| 690|Drosophila melanogaster LD31194p pro... 29 4.2
AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family sp... 29 4.2
AF231031-1|AAF68949.1| 690|Drosophila melanogaster rasputin pro... 29 4.2
AE014297-1713|AAN13573.1| 690|Drosophila melanogaster CG9412-PE... 29 4.2
AE014297-1712|AAN13572.1| 690|Drosophila melanogaster CG9412-PD... 29 4.2
AE014297-1711|AAN13571.1| 690|Drosophila melanogaster CG9412-PC... 29 4.2
AE014297-1710|AAG22151.2| 690|Drosophila melanogaster CG9412-PB... 29 4.2
AE014297-1709|AAF54965.3| 690|Drosophila melanogaster CG9412-PA... 29 4.2
AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB... 29 4.2
M31162-1|AAA28859.1| 448|Drosophila melanogaster protein ( D.me... 29 5.5
BT001626-1|AAN71381.1| 562|Drosophila melanogaster RE37461p pro... 29 5.5
AY089622-1|AAL90360.1| 448|Drosophila melanogaster RE35772p pro... 29 5.5
AY061501-1|AAL29049.1| 448|Drosophila melanogaster LD46049p pro... 29 5.5
AE014134-1210|AAF52471.1| 448|Drosophila melanogaster CG8749-PA... 29 5.5
BT022170-1|AAY51564.1| 562|Drosophila melanogaster IP01303p pro... 29 7.3
AY070612-1|AAL48083.1| 470|Drosophila melanogaster RE71384p pro... 29 7.3
AE014297-3445|AAN13978.1| 470|Drosophila melanogaster CG5422-PD... 29 7.3
AE014297-3444|AAN13977.1| 464|Drosophila melanogaster CG5422-PF... 29 7.3
AE014297-3443|AAF56224.1| 464|Drosophila melanogaster CG5422-PC... 29 7.3
AE014297-3442|AAF56225.1| 464|Drosophila melanogaster CG5422-PB... 29 7.3
AE013599-187|AAM68383.1| 562|Drosophila melanogaster CG30443-PA... 29 7.3
AY122066-1|AAM52578.1| 690|Drosophila melanogaster AT09438p pro... 28 9.6
AY071420-1|AAL49042.1| 302|Drosophila melanogaster RE50009p pro... 28 9.6
AE014297-279|AAF52006.1| 302|Drosophila melanogaster CG2931-PA ... 28 9.6
AE013599-2499|AAG22261.1| 690|Drosophila melanogaster CG4878-PB... 28 9.6
AE013599-2498|AAF57842.1| 690|Drosophila melanogaster CG4878-PA... 28 9.6
>M89775-1|AAA28441.1| 216|Drosophila melanogaster small nuclear
ribonucleoprotein protein.
Length = 216
Score = 149 bits (362), Expect = 2e-36
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
EELKKSLYAIFSQFGQILDIVA+KTLKMRGQAFVIF+EI SA+ ALR+MQGFPFYDKPM+
Sbjct: 21 EELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFYDKPMQ 80
Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
I YSK DSDI+AK KGTF+ERPK+
Sbjct: 81 IAYSKSDSDIVAKIKGTFKERPKK 104
Score = 104 bits (250), Expect = 9e-23
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +3
Query: 351 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 506
N EQPPNQILFLTNLP+ET+EMMLSMLFNQFPGFKEVRLVPNRHDIAFVE
Sbjct: 133 NAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 184
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 515 EMQSAAAKEALQGFKITPTHAMKITFAKK 601
E+QS AAKEALQGFKITPTHAMKITFAKK
Sbjct: 188 ELQSNAAKEALQGFKITPTHAMKITFAKK 216
>L29521-1|AAA28903.1| 216|Drosophila melanogaster nuclear protein
protein.
Length = 216
Score = 149 bits (362), Expect = 2e-36
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
EELKKSLYAIFSQFGQILDIVA+KTLKMRGQAFVIF+EI SA+ ALR+MQGFPFYDKPM+
Sbjct: 21 EELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFYDKPMQ 80
Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
I YSK DSDI+AK KGTF+ERPK+
Sbjct: 81 IAYSKSDSDIVAKIKGTFKERPKK 104
Score = 104 bits (250), Expect = 9e-23
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +3
Query: 351 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 506
N EQPPNQILFLTNLP+ET+EMMLSMLFNQFPGFKEVRLVPNRHDIAFVE
Sbjct: 133 NAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 184
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 515 EMQSAAAKEALQGFKITPTHAMKITFAKK 601
E+QS AAKEALQGFKITPTHAMKITFAKK
Sbjct: 188 ELQSNAAKEALQGFKITPTHAMKITFAKK 216
>AY061491-1|AAL29039.1| 216|Drosophila melanogaster LD45302p
protein.
Length = 216
Score = 149 bits (362), Expect = 2e-36
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
EELKKSLYAIFSQFGQILDIVA+KTLKMRGQAFVIF+EI SA+ ALR+MQGFPFYDKPM+
Sbjct: 21 EELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFYDKPMQ 80
Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
I YSK DSDI+AK KGTF+ERPK+
Sbjct: 81 IAYSKSDSDIVAKIKGTFKERPKK 104
Score = 104 bits (250), Expect = 9e-23
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +3
Query: 351 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 506
N EQPPNQILFLTNLP+ET+EMMLSMLFNQFPGFKEVRLVPNRHDIAFVE
Sbjct: 133 NAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 184
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 515 EMQSAAAKEALQGFKITPTHAMKITFAKK 601
E+QS AAKEALQGFKITPTHAMKITFAKK
Sbjct: 188 ELQSNAAKEALQGFKITPTHAMKITFAKK 216
>AE014298-717|AAF46017.1| 216|Drosophila melanogaster CG4528-PA
protein.
Length = 216
Score = 149 bits (362), Expect = 2e-36
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
EELKKSLYAIFSQFGQILDIVA+KTLKMRGQAFVIF+EI SA+ ALR+MQGFPFYDKPM+
Sbjct: 21 EELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFYDKPMQ 80
Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
I YSK DSDI+AK KGTF+ERPK+
Sbjct: 81 IAYSKSDSDIVAKIKGTFKERPKK 104
Score = 104 bits (250), Expect = 9e-23
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +3
Query: 351 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 506
N EQPPNQILFLTNLP+ET+EMMLSMLFNQFPGFKEVRLVPNRHDIAFVE
Sbjct: 133 NAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 184
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 515 EMQSAAAKEALQGFKITPTHAMKITFAKK 601
E+QS AAKEALQGFKITPTHAMKITFAKK
Sbjct: 188 ELQSNAAKEALQGFKITPTHAMKITFAKK 216
>BT024321-1|ABC86383.1| 407|Drosophila melanogaster IP10959p
protein.
Length = 407
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATV---ALRSMQGFPFYDK 171
E+ + LYA ++ + LDI M+ +M+GQAFV F + ++ + AL G ++DK
Sbjct: 339 EQQLRELYAKYTAASK-LDIKVMQQGRMKGQAFVTFLDANNPEIIAQALNETNGLLWHDK 397
Query: 172 PMRIQYSK 195
PM + Y K
Sbjct: 398 PMIVCYGK 405
>AE013599-3316|AAM68198.1| 407|Drosophila melanogaster CG30327-PA
protein.
Length = 407
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATV---ALRSMQGFPFYDK 171
E+ + LYA ++ + LDI M +M+GQAFV F + ++ + AL G ++DK
Sbjct: 339 EQQLRELYAKYTAASK-LDIKVMHQGRMKGQAFVTFLDANNPEIIAQALNETNGLLWHDK 397
Query: 172 PMRIQYSK 195
PM + Y K
Sbjct: 398 PMIVCYGK 405
>AY089603-1|AAL90341.1| 121|Drosophila melanogaster RE19804p
protein.
Length = 121
Score = 36.7 bits (81), Expect = 0.028
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 19 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
+Y IF +FG I I T + RG AFV++ +I A A + GF ++ + + Y
Sbjct: 31 MYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 87
>AE014296-1096|AAF50675.1| 121|Drosophila melanogaster CG13298-PA
protein.
Length = 121
Score = 36.7 bits (81), Expect = 0.028
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 19 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
+Y IF +FG I I T + RG AFV++ +I A A + GF ++ + + Y
Sbjct: 31 MYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 87
>AE014134-3163|AAF53845.1| 154|Drosophila melanogaster CG10466-PA
protein.
Length = 154
Score = 35.9 bits (79), Expect = 0.048
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 19 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
L +FSQ+G++++I + KT K +G F+ + + S +A+ ++ G D+ +R+ +
Sbjct: 50 LVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDH 109
>AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p
protein.
Length = 418
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 384 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 506
L++ NLP+E +E L F QF + + LVP R AFV+
Sbjct: 234 LYVGNLPEEITEPELRDQFYQFGEIRSIALVP-RQQCAFVQ 273
>AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA
protein.
Length = 418
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 384 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE 506
L++ NLP+E +E L F QF + + LVP R AFV+
Sbjct: 234 LYVGNLPEEITEPELRDQFYQFGEIRSIALVP-RQQCAFVQ 273
>X15702-1|CAA33732.1| 544|Drosophila melanogaster protein (
Fruitfly LA9 mRNA forDNA binding protein. ).
Length = 544
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 324 GIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQF 449
GIP + + P NQI+F+TNLP+E L LF +F
Sbjct: 158 GIPKVKV-GKIPLGTPKNQIVFVTNLPNEYLHKDLVALFAKF 198
>AY058519-1|AAL13748.1| 542|Drosophila melanogaster LD22216p
protein.
Length = 542
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 324 GIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQF 449
GIP + + P NQI+F+TNLP+E L LF +F
Sbjct: 158 GIPKVKV-GKIPLGTPKNQIVFVTNLPNEYLHKDLVALFAKF 198
>AE014297-4840|AAF57213.1| 542|Drosophila melanogaster CG2050-PA
protein.
Length = 542
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 324 GIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQF 449
GIP + + P NQI+F+TNLP+E L LF +F
Sbjct: 158 GIPKVKV-GKIPLGTPKNQIVFVTNLPNEYLHKDLVALFAKF 198
>AF172637-1|AAD46930.1| 266|Drosophila melanogaster LD24793p
protein.
Length = 266
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 28 IFSQFGQILDIVAM--KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSKID 201
+F+ FG I ++ + G A VIF + A A++ G P +PM IQ + D
Sbjct: 128 LFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSD 187
Query: 202 SDIIAK 219
++ +
Sbjct: 188 VAVLTR 193
>AE014297-550|AAF54070.1| 266|Drosophila melanogaster CG1101-PA
protein.
Length = 266
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 28 IFSQFGQILDIVAM--KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSKID 201
+F+ FG I ++ + G A VIF + A A++ G P +PM IQ + D
Sbjct: 128 LFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSD 187
Query: 202 SDIIAK 219
++ +
Sbjct: 188 VAVLTR 193
>BT011006-1|AAR27877.1| 690|Drosophila melanogaster AT27578p
protein.
Length = 690
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 375 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
NQ LFL N+P SE L +F++F E+R++
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRIL 525
>AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p
protein.
Length = 195
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
+ L +F + G++ DI + T + RG AFV F + A AL +M G + +R+
Sbjct: 37 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRV 96
Query: 184 QYSK 195
Q ++
Sbjct: 97 QMAR 100
>AY058617-1|AAL13846.1| 690|Drosophila melanogaster LD31194p
protein.
Length = 690
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 375 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
NQ LFL N+P SE L +F++F E+R++
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRIL 525
>AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family
splicing factor SC35 protein.
Length = 195
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
+ L +F + G++ DI + T + RG AFV F + A AL +M G + +R+
Sbjct: 37 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRV 96
Query: 184 QYSK 195
Q ++
Sbjct: 97 QMAR 100
>AF231031-1|AAF68949.1| 690|Drosophila melanogaster rasputin
protein.
Length = 690
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 375 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
NQ LFL N+P SE L +F++F E+R++
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRIL 525
>AE014297-1713|AAN13573.1| 690|Drosophila melanogaster CG9412-PE,
isoform E protein.
Length = 690
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 375 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
NQ LFL N+P SE L +F++F E+R++
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRIL 525
>AE014297-1712|AAN13572.1| 690|Drosophila melanogaster CG9412-PD,
isoform D protein.
Length = 690
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 375 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
NQ LFL N+P SE L +F++F E+R++
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRIL 525
>AE014297-1711|AAN13571.1| 690|Drosophila melanogaster CG9412-PC,
isoform C protein.
Length = 690
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 375 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
NQ LFL N+P SE L +F++F E+R++
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRIL 525
>AE014297-1710|AAG22151.2| 690|Drosophila melanogaster CG9412-PB,
isoform B protein.
Length = 690
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 375 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
NQ LFL N+P SE L +F++F E+R++
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRIL 525
>AE014297-1709|AAF54965.3| 690|Drosophila melanogaster CG9412-PA,
isoform A protein.
Length = 690
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 375 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV 476
NQ LFL N+P SE L +F++F E+R++
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRIL 525
>AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB,
isoform B protein.
Length = 195
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
+ L +F + G++ DI + T + RG AFV F + A AL +M G + +R+
Sbjct: 37 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRV 96
Query: 184 QYSK 195
Q ++
Sbjct: 97 QMAR 100
>M31162-1|AAA28859.1| 448|Drosophila melanogaster protein (
D.melanogaster U1 70Ksmall nuclear ribonucleoprotein
gene, complete cds. ).
Length = 448
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +3
Query: 357 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVELEMKC 521
NA + P + LF+ + +TSE L F + K++ L+ ++ AF+E E +
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 522 NLQQLKKHYKDSK 560
++ KH K
Sbjct: 155 DMHAAYKHADGKK 167
>BT001626-1|AAN71381.1| 562|Drosophila melanogaster RE37461p
protein.
Length = 562
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 60 SSNENLKNAWPSICYFQGNFKCHCCFAEHARISIL 164
S N+K+A S G F C+ C AE+AR+ L
Sbjct: 442 SGTPNIKSAATSKSQAAGKFYCNACGAEYARLFAL 476
>AY089622-1|AAL90360.1| 448|Drosophila melanogaster RE35772p
protein.
Length = 448
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +3
Query: 357 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVELEMKC 521
NA + P + LF+ + +TSE L F + K++ L+ ++ AF+E E +
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 522 NLQQLKKHYKDSK 560
++ KH K
Sbjct: 155 DMHAAYKHADGKK 167
>AY061501-1|AAL29049.1| 448|Drosophila melanogaster LD46049p
protein.
Length = 448
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +3
Query: 357 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVELEMKC 521
NA + P + LF+ + +TSE L F + K++ L+ ++ AF+E E +
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 522 NLQQLKKHYKDSK 560
++ KH K
Sbjct: 155 DMHAAYKHADGKK 167
>AE014134-1210|AAF52471.1| 448|Drosophila melanogaster CG8749-PA
protein.
Length = 448
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +3
Query: 357 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVELEMKC 521
NA + P + LF+ + +TSE L F + K++ L+ ++ AF+E E +
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 522 NLQQLKKHYKDSK 560
++ KH K
Sbjct: 155 DMHAAYKHADGKK 167
>BT022170-1|AAY51564.1| 562|Drosophila melanogaster IP01303p
protein.
Length = 562
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 60 SSNENLKNAWPSICYFQGNFKCHCCFAEHARISIL 164
S N+K+A S G F C+ C AE+AR+ L
Sbjct: 442 SGTPNIKSAATSKSQAAGKFYCNTCGAEYARLFAL 476
>AY070612-1|AAL48083.1| 470|Drosophila melanogaster RE71384p
protein.
Length = 470
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
++L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 109 ETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRT 168
Query: 184 QYS 192
+S
Sbjct: 169 NWS 171
>AE014297-3445|AAN13978.1| 470|Drosophila melanogaster CG5422-PD,
isoform D protein.
Length = 470
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
++L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 109 ETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRT 168
Query: 184 QYS 192
+S
Sbjct: 169 NWS 171
>AE014297-3444|AAN13977.1| 464|Drosophila melanogaster CG5422-PF,
isoform F protein.
Length = 464
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
++L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 109 ETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRT 168
Query: 184 QYS 192
+S
Sbjct: 169 NWS 171
>AE014297-3443|AAF56224.1| 464|Drosophila melanogaster CG5422-PC,
isoform C protein.
Length = 464
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
++L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 109 ETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRT 168
Query: 184 QYS 192
+S
Sbjct: 169 NWS 171
>AE014297-3442|AAF56225.1| 464|Drosophila melanogaster CG5422-PB,
isoform B protein.
Length = 464
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 13 KSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
++L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 109 ETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRT 168
Query: 184 QYS 192
+S
Sbjct: 169 NWS 171
>AE013599-187|AAM68383.1| 562|Drosophila melanogaster CG30443-PA
protein.
Length = 562
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 60 SSNENLKNAWPSICYFQGNFKCHCCFAEHARISIL 164
S N+K+A S G F C+ C AE+AR+ L
Sbjct: 442 SGTPNIKSAATSKSQAAGKFYCNTCGAEYARLFAL 476
>AY122066-1|AAM52578.1| 690|Drosophila melanogaster AT09438p
protein.
Length = 690
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIV--AMKTLKMRGQAFVIFREISSATVALRSM 147
E+LK + +FS +G+I+++V + K +G AF+ +++ A A++ +
Sbjct: 73 EKLKLVINKLFSNYGEIVNVVYPVDEEGKTKGYAFMEYKQARQAEEAVKKL 123
>AY071420-1|AAL49042.1| 302|Drosophila melanogaster RE50009p
protein.
Length = 302
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 384 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR 485
+F +L ++ ++ +L+ FN+FP F+ R+V ++
Sbjct: 200 IFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDK 233
>AE014297-279|AAF52006.1| 302|Drosophila melanogaster CG2931-PA
protein.
Length = 302
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 384 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR 485
+F +L ++ ++ +L+ FN+FP F+ R+V ++
Sbjct: 200 IFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDK 233
>AE013599-2499|AAG22261.1| 690|Drosophila melanogaster CG4878-PB,
isoform B protein.
Length = 690
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIV--AMKTLKMRGQAFVIFREISSATVALRSM 147
E+LK + +FS +G+I+++V + K +G AF+ +++ A A++ +
Sbjct: 73 EKLKLVINKLFSNYGEIVNVVYPVDEEGKTKGYAFMEYKQARQAEEAVKKL 123
>AE013599-2498|AAF57842.1| 690|Drosophila melanogaster CG4878-PA,
isoform A protein.
Length = 690
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 EELKKSLYAIFSQFGQILDIV--AMKTLKMRGQAFVIFREISSATVALRSM 147
E+LK + +FS +G+I+++V + K +G AF+ +++ A A++ +
Sbjct: 73 EKLKLVINKLFSNYGEIVNVVYPVDEEGKTKGYAFMEYKQARQAEEAVKKL 123
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,637,561
Number of Sequences: 53049
Number of extensions: 569363
Number of successful extensions: 1243
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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