Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00005
(439 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56792 Cluster: PREDICTED: similar to CCR4-NOT t... 93 2e-18
UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2; ... 90 2e-17
UniRef50_Q94547 Cluster: Regulator of gene activity; n=3; Sophop... 76 3e-13
UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:... 75 5e-13
UniRef50_Q9NZN8 Cluster: CCR4-NOT transcription complex subunit ... 39 0.054
UniRef50_Q4TC75 Cluster: Chromosome undetermined SCAF7048, whole... 38 0.071
UniRef50_Q1MNU4 Cluster: Putative uncharacterized protein LIC037... 34 1.5
UniRef50_Q9I7K2 Cluster: CG4655-PA, isoform A; n=4; Diptera|Rep:... 33 3.5
UniRef50_A7RSD0 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 33 3.5
UniRef50_A5E3K8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_A6PWQ7 Cluster: Likely orthologue of H. sapiens chromos... 31 8.1
UniRef50_Q9ULT8 Cluster: E3 ubiquitin-protein ligase HECTD1; n=5... 31 8.1
>UniRef50_UPI0000D56792 Cluster: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 2 isoform b; n=2;
Endopterygota|Rep: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 2 isoform b - Tribolium
castaneum
Length = 483
Score = 93.1 bits (221), Expect = 2e-18
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = +3
Query: 9 SSMSNLSRFNAGNNYHSVFGEGGDTSTPPLLDLSEFPSLTARGAGDQXXXXXXXXXGSKP 188
S M N++ ++++SVFG G DT+TP LLDLSEFPSLT R +GD G+KP
Sbjct: 53 SQMGNMNSLGGYSSFNSVFGSG-DTNTPSLLDLSEFPSLTNRSSGDNVPQPSPMP-GAKP 110
Query: 189 YVGMVKQPTSEQSEFTMSSE 248
YVGMVKQPTSE SEFTMSSE
Sbjct: 111 YVGMVKQPTSEASEFTMSSE 130
>UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2;
Endopterygota|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 513
Score = 90.2 bits (214), Expect = 2e-17
Identities = 51/76 (67%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
Frame = +3
Query: 36 NAGNNYHSVFGEG-GDTSTPPLLDLSEFPSLT-ARGA-GDQXXXXXXXXX--GSKPYVGM 200
N+ NN+HSVF G +T TPPLLDLSEFPSLT ARG DQ GSKPYVGM
Sbjct: 157 NSINNFHSVFDNGTAETGTPPLLDLSEFPSLTNARGGQNDQSLPQSNALQPPGSKPYVGM 216
Query: 201 VKQPTSEQSEFTMSSE 248
VKQPTSEQ+EFTMSSE
Sbjct: 217 VKQPTSEQTEFTMSSE 232
>UniRef50_Q94547 Cluster: Regulator of gene activity; n=3;
Sophophora|Rep: Regulator of gene activity - Drosophila
melanogaster (Fruit fly)
Length = 585
Score = 76.2 bits (179), Expect = 3e-13
Identities = 49/79 (62%), Positives = 52/79 (65%), Gaps = 11/79 (13%)
Frame = +3
Query: 45 NNYHSVFGEGG--DTSTPPLLDLSEFPSLT-ARGAGDQXXXXXXXXX--GSKPY------ 191
NN+H VFG GG DTSTP LLD +EFPSLT ARG DQ GSKPY
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQPPGSKPYGNFFTS 199
Query: 192 VGMVKQPTSEQSEFTMSSE 248
GMVKQPTSEQSEFTMS+E
Sbjct: 200 FGMVKQPTSEQSEFTMSNE 218
>UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:
ENSANGP00000026958 - Anopheles gambiae str. PEST
Length = 537
Score = 75.4 bits (177), Expect = 5e-13
Identities = 48/82 (58%), Positives = 51/82 (62%), Gaps = 11/82 (13%)
Frame = +3
Query: 36 NAGNNYHSVF-GEGGDTSTPPLLDLSEFPSLT-ARGA-GDQ--XXXXXXXXXGSKPY--- 191
N+ NNYH VF G +T TPPLLDLSEFPSLT ARG DQ GSKPY
Sbjct: 140 NSINNYHGVFDGSAAETGTPPLLDLSEFPSLTNARGGQNDQSLPQSNALQPPGSKPYGKS 199
Query: 192 ---VGMVKQPTSEQSEFTMSSE 248
GMVKQPTSEQ FTMS+E
Sbjct: 200 VAHFGMVKQPTSEQIAFTMSNE 221
>UniRef50_Q9NZN8 Cluster: CCR4-NOT transcription complex subunit 2;
n=58; Eumetazoa|Rep: CCR4-NOT transcription complex
subunit 2 - Homo sapiens (Human)
Length = 540
Score = 38.7 bits (86), Expect = 0.054
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +3
Query: 15 MSNLSRFNAGNNYHSVFGEGGDTSTPPL-LDLSEFPSLTAR----GAGDQXXXXXXXXXG 179
M+ F N+ S G D S LDLS+FP+L R G+G+ G
Sbjct: 196 MNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLA-G 254
Query: 180 SKPYVGMVKQPTSEQS-EFTMSSE 248
PYVGMV +P +EQS +F++ +E
Sbjct: 255 RAPYVGMVTKPANEQSQDFSIHNE 278
>UniRef50_Q4TC75 Cluster: Chromosome undetermined SCAF7048, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7048,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 560
Score = 38.3 bits (85), Expect = 0.071
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +3
Query: 99 LDLSEFPSL---TARGAGDQXXXXXXXXXGSKPYVGMVKQPTSEQS-EFTMSSE 248
LDLS+FP+L + R A G PYVGMV +P+ EQS +F++ +E
Sbjct: 273 LDLSDFPALADRSRRDAASNPAPLPNPLAGRAPYVGMVTKPSGEQSQDFSIHNE 326
>UniRef50_Q1MNU4 Cluster: Putative uncharacterized protein LIC037;
n=1; Lawsonia intracellularis PHE/MN1-00|Rep: Putative
uncharacterized protein LIC037 - Lawsonia
intracellularis (strain PHE/MN1-00)
Length = 1607
Score = 33.9 bits (74), Expect = 1.5
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +1
Query: 58 QFLVKVVIHQHHHFWT*ANFHH*QQEARVTKHPLQHHHLRALNPML 195
QF IH HHH +HH QQ+ HPL HHH + P+L
Sbjct: 403 QFQHYKYIHHHHHSHHQHRYHHQQQQHH--HHPL-HHHYKIGIPLL 445
>UniRef50_Q9I7K2 Cluster: CG4655-PA, isoform A; n=4; Diptera|Rep:
CG4655-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 503
Score = 32.7 bits (71), Expect = 3.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 82 HQHHHFWT*ANFHH*QQEARVTKHPLQHHHLRALNPMLVW 201
H HHH + HH QQ+ +QHH L P+ W
Sbjct: 88 HHHHHHRLQHHHHHHQQQHNHQNQQMQHHWPSRLGPIGPW 127
>UniRef50_A7RSD0 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 87
Score = 32.7 bits (71), Expect = 3.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 82 HQHHHFWT*ANFHH*QQEARVTKHPLQHHH 171
H HHH + + HH Q + R+ + HHH
Sbjct: 18 HHHHHHYHYHHHHHYQHQKRINQQHHHHHH 47
>UniRef50_A5E3K8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 818
Score = 32.7 bits (71), Expect = 3.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 79 IHQHHHFWT*ANFHH*QQEARVTKHPLQHHH 171
+HQHHH HH QQ+ + + LQHHH
Sbjct: 268 LHQHHHH------HHHQQQQQQQQQQLQHHH 292
>UniRef50_A6PWQ7 Cluster: Likely orthologue of H. sapiens chromosome
X open reading frame 6; n=2; Eutheria|Rep: Likely
orthologue of H. sapiens chromosome X open reading frame
6 - Mus musculus (Mouse)
Length = 803
Score = 31.5 bits (68), Expect = 8.1
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 34 STLATTTIQFLVKVVIHQHHHFWT*ANFHH*QQEARVTKHPLQHHH 171
S+ AT T+Q QHHH HH QQ+ +H QHHH
Sbjct: 582 SSTATATLQL-------QHHHQQHHHQQHHHQQQHHQQQHHQQHHH 620
>UniRef50_Q9ULT8 Cluster: E3 ubiquitin-protein ligase HECTD1; n=59;
Deuterostomia|Rep: E3 ubiquitin-protein ligase HECTD1 -
Homo sapiens (Human)
Length = 2612
Score = 31.5 bits (68), Expect = 8.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 21 NLSRFNAGNNYHSVFGEGGDTSTPPLLDLSEFPSLTARG 137
NLSR ++ NN +++ T+T PL+ FP+LT G
Sbjct: 1567 NLSRSSSDNNTNTLGRNVMSTATSPLMGAQSFPNLTTPG 1605
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,226,983
Number of Sequences: 1657284
Number of extensions: 5343837
Number of successful extensions: 14168
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14081
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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