Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00003
(632 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 133 6e-31
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 133 6e-31
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 133 6e-31
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 133 6e-31
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 133 6e-31
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 133 6e-31
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 129 9e-30
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 118 2e-26
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 116 7e-26
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 116 7e-26
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 116 7e-26
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 116 7e-26
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 116 7e-26
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 107 4e-23
BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein. 52 2e-06
BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein. 52 2e-06
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 42 0.002
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 42 0.002
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 42 0.002
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 42 0.002
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 42 0.002
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 42 0.002
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 42 0.002
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 42 0.002
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 38 0.022
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 38 0.022
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 38 0.022
BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein. 32 1.9
EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat ... 30 5.9
DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein. 30 5.9
AK095193-1|BAC04496.1| 389|Homo sapiens protein ( Homo sapiens ... 30 5.9
AK001237-1|BAA91573.1| 589|Homo sapiens protein ( Homo sapiens ... 30 7.8
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 133 bits (321), Expect = 6e-31
Identities = 63/82 (76%), Positives = 69/82 (84%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV AN
Sbjct: 46 FRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKLYDI+VAKVNTL
Sbjct: 106 KHQIKQAVKKLYDIDVAKVNTL 127
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG H + +KIR P+ L L
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRL 54
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 133 bits (321), Expect = 6e-31
Identities = 63/82 (76%), Positives = 69/82 (84%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV AN
Sbjct: 46 FRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKLYDI+VAKVNTL
Sbjct: 106 KHQIKQAVKKLYDIDVAKVNTL 127
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG H + +KIR P+ L L
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRL 54
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 133 bits (321), Expect = 6e-31
Identities = 63/82 (76%), Positives = 69/82 (84%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV AN
Sbjct: 37 FRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKAN 96
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKLYDI+VAKVNTL
Sbjct: 97 KHQIKQAVKKLYDIDVAKVNTL 118
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG H + +KIR P+ L L
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRL 45
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 133 bits (321), Expect = 6e-31
Identities = 63/82 (76%), Positives = 69/82 (84%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV AN
Sbjct: 46 FRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKLYDI+VAKVNTL
Sbjct: 106 KHQIKQAVKKLYDIDVAKVNTL 127
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG H + +KIR P+ L L
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRL 54
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 133 bits (321), Expect = 6e-31
Identities = 63/82 (76%), Positives = 69/82 (84%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV AN
Sbjct: 46 FRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKLYDI+VAKVNTL
Sbjct: 106 KHQIKQAVKKLYDIDVAKVNTL 127
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG H + +KIR P+ L L
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRL 54
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 133 bits (321), Expect = 6e-31
Identities = 63/82 (76%), Positives = 69/82 (84%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV AN
Sbjct: 46 FRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKLYDI+VAKVNTL
Sbjct: 106 KHQIKQAVKKLYDIDVAKVNTL 127
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG H + +KIR P+ L L
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRL 54
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 129 bits (311), Expect = 9e-30
Identities = 61/82 (74%), Positives = 67/82 (81%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R PKYPRKS P+RN++D Y II FPLT+E+AMKKIEDNNTLVFIV AN
Sbjct: 46 FRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINFPLTTESAMKKIEDNNTLVFIVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH I AVKKLYDI+VAKVNTL
Sbjct: 106 KHQISQAVKKLYDIDVAKVNTL 127
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG H + +KIR P+ L L
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRL 54
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 118 bits (283), Expect = 2e-26
Identities = 63/114 (55%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R P+YP+KS P+RN++ Y IIKFPLT+E+A+KKIE+NNTLVF V AN
Sbjct: 5 FRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTESAVKKIEENNTLVFTVDVKAN 64
Query: 442 KHHIKAAVKKLYDINVAKVNTLTGLMVRRKRTYDSLEM-MTHWTLPTKLASYKL 600
KH I+ AVKKLYD +VAKV TL + K+ Y L + + TKL S KL
Sbjct: 65 KHQIRQAVKKLYDSDVAKVTTLI-CPDKEKKAYVRLAPDYDAFNVVTKLGSPKL 117
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 116 bits (279), Expect = 7e-26
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
F+RPKT R P+YPRK+ P+RN++D Y IIKFPLT+E AMKKI+DNNTLVF V AN
Sbjct: 46 FQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKFPLTTEFAMKKIKDNNTLVFTVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKL DI+ AKVNTL
Sbjct: 106 KHQIKQAVKKLCDIDGAKVNTL 127
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG HG + +KIR P+ L L
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRL 54
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 116 bits (279), Expect = 7e-26
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
F+RPKT R P+YPRK+ P+RN++D Y IIKFPLT+E AMKKI+DNNTLVF V AN
Sbjct: 46 FQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKFPLTTEFAMKKIKDNNTLVFTVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKL DI+ AKVNTL
Sbjct: 106 KHQIKQAVKKLCDIDGAKVNTL 127
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG HG + +KIR P+ L L
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRL 54
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 116 bits (279), Expect = 7e-26
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
F+RPKT R P+YPRK+ P+RN++D Y IIKFPLT+E AMKKI+DNNTLVF V AN
Sbjct: 46 FQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKFPLTTEFAMKKIKDNNTLVFTVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKL DI+ AKVNTL
Sbjct: 106 KHQIKQAVKKLCDIDGAKVNTL 127
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG HG + +KIR P+ L L
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRL 54
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 116 bits (279), Expect = 7e-26
Identities = 59/106 (55%), Positives = 73/106 (68%), Gaps = 6/106 (5%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
FRRPKT R P+YPRKS P+RN++ Y IIKFPL +E+A+KKIE+NNTLVF V AN
Sbjct: 5 FRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATESAVKKIEENNTLVFTVDVKAN 64
Query: 442 KHHIKAAVKKLYDINVAKVNTL------TGLMVRRKRTYDSLEMMT 561
KH I+ AVKKLYD +VAKV TL VR YD+ +++T
Sbjct: 65 KHQIRQAVKKLYDSDVAKVTTLICPDKENKAYVRLAPDYDAFDVVT 110
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 116 bits (279), Expect = 7e-26
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
F+RPKT R P+YPRK+ P+RN++D Y IIKFPLT+E AMKKI+DNNTLVF V AN
Sbjct: 46 FQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKFPLTTEFAMKKIKDNNTLVFTVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKL DI+ AKVNTL
Sbjct: 106 KHQIKQAVKKLCDIDGAKVNTL 127
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPRRLXL 289
KALKA++ V+KG HG + +KIR P+ L L
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRL 54
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 107 bits (256), Expect = 4e-23
Identities = 49/82 (59%), Positives = 63/82 (76%)
Frame = +1
Query: 262 FRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 441
F+RPKT R P+YP KS P+RN++ Y +IKFPLT+E+A+K+ E+NNTL+F V AN
Sbjct: 46 FQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKFPLTTESAVKRTEENNTLLFTVDVKAN 105
Query: 442 KHHIKAAVKKLYDINVAKVNTL 507
KH IK AVKKLYD +VA+V TL
Sbjct: 106 KHQIKQAVKKLYDGDVAEVTTL 127
>BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 51.6 bits (118), Expect = 2e-06
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +1
Query: 385 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 507
MKK EDNN LVF V+ ANKH KKLYD +VAKVNTL
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAKVNTL 36
>BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 51.6 bits (118), Expect = 2e-06
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +1
Query: 385 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 507
MKK EDNN LVF V+ ANKH KKLYD +VAKVNTL
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAKVNTL 36
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V GNLM+ S FLLG F GYLGCL +VLG RK
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 67
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V GNLM+ S FLLG F GYLGCL +VLG RK
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 386
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V GNLM+ S FLLG F GYLGCL +VLG RK
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 67
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V GNLM+ S FLLG F GYLGCL +VLG RK
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 386
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V GNLM+ S FLLG F GYLGCL +VLG RK
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 67
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V GNLM+ S FLLG F GYLGCL +VLG RK
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 386
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V GNLM+ S FLLG F GYLGCL +VLG RK
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 386
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V GNLM+ S FLLG F GYLGCL +VLG RK
Sbjct: 260 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 300
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 38.3 bits (85), Expect = 0.022
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V G LM+ S FLLG F GYLGCL +VLG RK
Sbjct: 27 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 67
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 38.3 bits (85), Expect = 0.022
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V G LM+ S FLLG F GYLGCL +VLG RK
Sbjct: 346 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 386
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 38.3 bits (85), Expect = 0.022
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -1
Query: 383 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRK 261
A S V G LM+ S FLLG F GYLGCL +VLG RK
Sbjct: 364 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRK 404
>BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein.
Length = 392
Score = 31.9 bits (69), Expect = 1.9
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 289 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN-NTLVFIVHTSANKHHIKAAV 465
P+ YP KSL +R I FPL A+KK+ED T + + H +++A
Sbjct: 69 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLEDTWYTRFALKYQPIENHRLESAY 128
Query: 466 KKLYDINVAKVNTL 507
+ + V N L
Sbjct: 129 QNHLILKVLVFNFL 142
>EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat
protein transcript variant 2 protein.
Length = 782
Score = 30.3 bits (65), Expect = 5.9
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 349 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 501
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 507 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 556
>DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.9
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 349 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 501
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 334 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 383
>AK095193-1|BAC04496.1| 389|Homo sapiens protein ( Homo sapiens
cDNA FLJ37874 fis, clone BRSSN2018731, weakly similar to
ANKYRIN 1. ).
Length = 389
Score = 30.3 bits (65), Expect = 5.9
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 349 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 501
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 215 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 264
>AK001237-1|BAA91573.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ10375 fis, clone NT2RM2001950. ).
Length = 589
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 289 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 402
P+ YP KSL +R I FPL A+KK+ED
Sbjct: 76 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLED 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,698,933
Number of Sequences: 237096
Number of extensions: 1657571
Number of successful extensions: 7465
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 7337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7446
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -